Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CymR regulog to Geobacillus kaustophilus HTA426

Reference regulog properties
Source regulog: CymR - Bacillales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Cysteine metabolism
Effector: O-acetyl-L-serine; CysK, cysteine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus kaustophilus HTA426
Orthologous TF(s) GK2565
Regulated genes 5
Built upon 65 sites [see more]
Predicted regulatory interactions in Geobacillus kaustophilus HTA426
Locus tag Position Score Sequence
Position: -38
Score: 4.7
Sequence: CAAAGTCGATAAAATTAATGGGGATTA
Locus tag: GK0065
GK0065 -38 4.7 CAAAGTCGATAAAATTAATGGGGATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysK
Ortholog function: Cysteine synthase (EC 2.5.1.47)
Bacillus subtilis subsp. subtilis str. 168 BSU00730 -39 5.4 TAATACCAATACAAATAGTCGGAAATT
Bacillus amyloliquefaciens FZB42 RBAM_000840 -39 5.8 TAATACCAATAAATTTAGTCGGAAATT
Bacillus pumilus SAFR-032 BPUM_0057 -40 4.6 TtAaTaCaATaAAATTAcTcGGAgaTA
Bacillus licheniformis DSM 13 BLi00089 -38 5.6 TAATCCCAATAAAATTACTCGGAAATT
Anoxybacillus flavithermus WK1 Aflv_0065 -30 5 CAAATTCTATAAAAATACTCGGGATTA
Geobacillus kaustophilus HTA426 GK0065 -38 4.7 CAAAGTCGATAAAATTAATGGGGATTA
Bacillus cereus ATCC 14579 BC0075 -39 5.3 TAAAACCAATAAAAATACTCGGTGTTA
Bacillus halodurans C-125 BH0088 -39 5.2 GAAAACCAATAAATTTACTTGGGATTA
Bacillus clausii KSM-K16 ABC0109 -42 4.9 TAAAACCAATGAAGATACTAGGGATTG
Oceanobacillus iheyensis HTE831 OB0084 -41 6 TAAATCTTATAAAAATACTTGGAATTA
Paenibacillus sp. JDR-2 Pjdr2_0074 -44 5.7 AAAAACCAACTAAATTAGTCGGAATAA
Position: -80
Score: 5.2
Sequence: AAATTCATAGTTGACATCTATGAATAA
Locus tag: GK1638
GK1638 -80 5.2 AAATTCATAGTTGACATCTATGAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytnM
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU29280 -54 5.7 AAAAGCTTAGTAAACAAATAGGAATTA
Geobacillus kaustophilus HTA426 GK1638 -80 5.2 AAATTCATAGTTGACATCTATGAATAA
Bacillus cereus ATCC 14579 BC3050 -136 5.4 TAAAACCTAGTTGATTTATACGATTAA
Position: -51
Score: 5.9
Sequence: AAAAACATACTATATTTATAGGAATTA
Locus tag: GK2543
GK2543 -51 5.9 AAAAACATACTATATTTATAGGAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrrT
Ortholog function: SAM-dependent methyltransferase
Bacillus subtilis subsp. subtilis str. 168 BSU27280 -49 6.1 TAATCCATAGTATACTTATAGGAATTA
Bacillus amyloliquefaciens FZB42 RBAM_024380 -49 5.9 TAATCCATACTATACTCATAGGAATTA
Bacillus pumilus SAFR-032 BPUM_2363 -51 5.4 TAAAACATACTATACGCATAGGAATAA
Bacillus licheniformis DSM 13 BLi02856 -54 5.8 TAAATCATACTATACTTATAGGAATTG
Anoxybacillus flavithermus WK1 Aflv_0758 -36 6.4 TAATTCATACTATACTTATAGGAATTA
Geobacillus kaustophilus HTA426 GK2543 -51 5.9 AAAAACATACTATATTTATAGGAATTA
Bacillus cereus ATCC 14579 BC4369 -29 5.1 TAAAACCGATAAGAAAAAGGGGAATTT
Paenibacillus sp. JDR-2 Pjdr2_5106 -105 5.2 TAAATCCGATTAATAAGGTTGGAAAAA
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