Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CmbR regulog to Streptococcus thermophilus LMD-9

Reference regulog properties
Source regulog: CmbR - Streptococcaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor (activator)
Biological process: Cysteine metabolism
Effector: O-acetyl-L-serine
Phylum: Firmicutes
Propagated regulon:
Target genome Streptococcus thermophilus LMD-9
Orthologous TF(s) STER_0901, STER_0552
Regulated genes 12
Built upon 104 sites [see more]
Predicted regulatory interactions in Streptococcus thermophilus LMD-9
Locus tag Position Score Sequence
Position: -97
Score: 5.7
Sequence: GTGATAGTATTTTCTTATCAC
Locus tag: STER_0333
STER_0333 -97 5.7 GTGATAGTATTTTCTTATCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gshT
Ortholog function: Predicted glutathione ABC transporter, substrate-binding protein
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0381 -75 5 TTGATAGGAATTAATTATTAG
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1680 -41 5 ATGATAAACTAATCTTATGAA
Streptococcus gallolyticus UCN34 GALLO_1845 -122 6 GTGATAAGTTTTATTTATCAC
Streptococcus mitis B6 smi_1945 -99 5.1 GCCATAAAGAAAACCTATCAC
Streptococcus mutans UA159 SMU.1942c -98 6 GTGATAGAATTTTCTTATCAC
-76 4.6 GTGATAGAAATTATATAATAG
Streptococcus pyogenes M1 GAS SPy0317 -75 4.5 TTGATAGGAATCAATTATTAG
Streptococcus thermophilus CNRZ1066 str0296 -98 5.7 GTGATAGTATTTTCTTATCAC
Streptococcus uberis 0140J SUB0365 -93 4.9 GTGATAGAGAACTATTATCAT
-71 4.2 GCGATAGTGAATCACTATTAG
Position: -97
Score: 5.7
Sequence: GTGATAGTATTTTCTTATCAC
Locus tag: STER_0339
STER_0339 -97 5.7 GTGATAGTATTTTCTTATCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gshT
Ortholog function: Predicted glutathione ABC transporter, substrate-binding protein
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0381 -75 5 TTGATAGGAATTAATTATTAG
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1680 -41 5 ATGATAAACTAATCTTATGAA
Streptococcus gallolyticus UCN34 GALLO_1845 -122 6 GTGATAAGTTTTATTTATCAC
Streptococcus mitis B6 smi_1945 -99 5.1 GCCATAAAGAAAACCTATCAC
Streptococcus mutans UA159 SMU.1942c -98 6 GTGATAGAATTTTCTTATCAC
-76 4.6 GTGATAGAAATTATATAATAG
Streptococcus pyogenes M1 GAS SPy0317 -75 4.5 TTGATAGGAATCAATTATTAG
Streptococcus thermophilus CNRZ1066 str0296 -98 5.7 GTGATAGTATTTTCTTATCAC
Streptococcus uberis 0140J SUB0365 -93 4.9 GTGATAGAGAACTATTATCAT
-71 4.2 GCGATAGTGAATCACTATTAG
Position: -132
Score: 4.5
Sequence: GTTATAGTAATAAACTATATC
Locus tag: STER_0390
STER_0390 -132 4.5 GTTATAGTAATAAACTATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: metB1
Ortholog function: Cystathionine gamma-synthase (EC 2.5.1.48)
Lactococcus lactis subsp. lactis Il1403 L0102 -132 4.3 GCCATAGGCAAGTTTTATTAT
Streptococcus gallolyticus UCN34 GALLO_1768 -142 5 GTTATAGTTTTTACTTATAGC
Streptococcus mutans UA159 SMU.1675 -110 4.3 CTTATAGTTTCTTTTTATAGC
Streptococcus suis 05ZYH33 SSU05_1562 -120 5.1 GTTATAAAGAAAAACTATAAC
Streptococcus thermophilus CNRZ1066 str0352 -132 4.5 GTTATAGTAATAAACTATATC
Position: -16
Score: 5.2
Sequence: ATGATAAAATTTTTTTATGGA
Locus tag: STER_0405
STER_0405 -16 5.2 ATGATAAAATTTTTTTATGGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: COG1739
Ortholog function: Conserved hypothetical protein
Streptococcus thermophilus CNRZ1066 str0367 -16 5.2 ATGATAAAATTTTTTTATGGA
Position: -114
Score: 5.3
Sequence: TTTATAAAAATTTCATATCAG
Locus tag: STER_0486
STER_0486 -114 5.3 TTTATAAAAATTTCATATCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: homR
Ortholog function: Homocysteine biosynthesis transcriptional regulato HomR, LysR family
Streptococcus gallolyticus UCN34 GALLO_1277 -175 4.4 ATAATCTAAATTTTTTATTAT
-113 5.9 GTTATAAAAAAATCTTATCAC
Streptococcus mutans UA159 SMU.930c -175 5.3 GCTATAAATTTTATTTATGAC
-110 5 GCCATAAGAAAAAGTTATCAC
Streptococcus thermophilus CNRZ1066 str0452 -108 5.3 TTTATAAAAATTTCATATCAG
Position: -97
Score: 5.1
Sequence: GTGATAGTTTTTTTCTATCTC
Position: -38
Score: 5.2
Sequence: GTGATAAGCTTGTTTTATTAC
Locus tag: STER_0627
STER_0627 -97 5.1 GTGATAGTTTTTTTCTATCTC
-38 5.2 GTGATAAGCTTGTTTTATTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mmuP
Ortholog function: Predicted S-methylmethionine permease
Streptococcus agalactiae 2603V/R SAG1306 -97 4.9 GTAATAGTTTTTCTTTATCAT
Streptococcus thermophilus CNRZ1066 str0583 -22 4.8 GTGATAGTTTTTCTCTATCTC
Position: -158
Score: 4.2
Sequence: GCTATACAAATATCTAATTAA
Locus tag: STER_0831
STER_0831 -158 4.2 GCTATACAAATATCTAATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: metE
Ortholog function: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Lactococcus lactis subsp. cremoris SK11 LACR_1368 -39 4.7 TTGATAAGATAGACCTATTAA
Lactococcus lactis subsp. lactis Il1403 L0100 -76 4.1 ATCATATTAAAAATGTATTAT
-39 4.7 TTGATAAGATAGACCTATTAA
Streptococcus agalactiae 2603V/R SAG2049 -109 4.1 GCTAAAAATATAAAATATTAA
Streptococcus gallolyticus UCN34 GALLO_1316 -221 4.2 ATAATAAATTTTATTAATCTA
-172 4.6 GTTATAGTTAAAAACTATAAT
Streptococcus gordonii str. Challis substr. CH1 SGO_0310 -182 4.2 GTTATAGTTTTTGATTATACC
Streptococcus mutans UA159 SMU.873 -188 4.6 GTTATAGATGAAAACTATAAC
Streptococcus pneumoniae TIGR4 SP_0585 -218 4.9 CTTATAAGAATTACTAATAAC
Streptococcus sanguinis SK36 SSA_0416 -182 4.3 GTCATAATTTCTACCTATAGC
Streptococcus suis 05ZYH33 SSU05_1774 -237 4.3 TTCATAGATAAAATCTATACC
Streptococcus thermophilus CNRZ1066 str0785 -119 4.2 GCTATACAAATATCTAATTAA
Position: -83
Score: 4.6
Sequence: GTTATAACTTTATTTTATAGG
Locus tag: STER_0836
STER_0836 -83 4.6 GTTATAACTTTATTTTATAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: dfpB
Ortholog function: Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)
Lactococcus lactis subsp. lactis Il1403 L167675 -59 4.8 TTGAAAAAATATTTTTATTAG
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0944 -177 4.7 TTGATAGTATCATTATATCAC
-10 4.3 CTGATAAAATATGGCTATGAA
Streptococcus thermophilus CNRZ1066 str0790 -83 4.3 GTTATAACTTTATTTTATATG
Position: -332
Score: 5.2
Sequence: TTGATAAAAAATACATATTAT
Locus tag: STER_1542
STER_1542 -332 5.2 TTGATAAAAAATACATATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: str1582
Ortholog function: Predicted polar amino acid ABC transporter, permease protein 1
Streptococcus gallolyticus UCN34 GALLO_1237 -96 5.3 GCTATAAAAATTATTTATGGC
Streptococcus gordonii str. Challis substr. CH1 SGO_0985 -139 5.2 CTTATAAATTTTTTCTATCAG
-117 4.9 CCGATAAAATATACATATTAT
Streptococcus mitis B6 smi_1436 -102 5.5 ATGATAAAAAATCCTTATAAC
-80 4.4 GCAATAAAAAATAGATATTAT
Streptococcus pneumoniae TIGR4 SP_0711 -140 4.4 GCAATAAAAAATAGATATTAT
Streptococcus thermophilus CNRZ1066 str1582 -237 4.8 GTTATATCTTTTCTTTATCAC
-215 5.2 TTGATAAAAAATACATATTAT
Position: -150
Score: 5.6
Sequence: GTGATATGATTTCCTTATCAC
Locus tag: STER_1618
STER_1618 -150 5.6 GTGATATGATTTCCTTATCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tcyB
Ortholog function: Cystine ABC transporter, permease protein
Lactococcus lactis subsp. cremoris SK11 LACR_1010 -77 5.1 GCTATAAGTTTTTTTTATGGC
Lactococcus lactis subsp. lactis Il1403 L163056 -77 5.1 GCTATAAGTTTTTTTTATGGC
Streptococcus agalactiae 2603V/R SAG0291 -96 5.5 TTGATATAAAATCTTTATCAC
-75 4.7 CTGATAAGGAAATACTATTAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1719 -99 5.3 GTGATAAGTTTTGCTTATTGC
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1580 -106 5 GCGATAGGCTTTTCTTATCGT
Streptococcus gallolyticus UCN34 GALLO_0415 -100 5.2 CTGATAGTTTTTTCTTATCAA
Streptococcus gordonii str. Challis substr. CH1 SGO_0578 -170 4.7 GTCATAAAATTTGCTTATACC
-148 4.3 TTGATAAATAATTTATACTGT
Streptococcus mitis B6 smi_1382 -164 4.7 GAGATAGTTTTTACTTATCTC
-142 5 TTGATAGATAAAATATATAGC
Streptococcus mutans UA159 SMU.460 -102 5.8 GTGATAGAAAAATATTATCAC
-80 5 GTGATAGGAAAAAACTATTAT
Streptococcus pneumoniae TIGR4 SP_1461 -164 4.3 GAAATAGTTTTTATCTATCTC
-142 5.2 TTGATAGATAAAATATATAAC
Streptococcus sanguinis SK36 SSA_1868 -250 5.4 GTGATATACTTTTCTTATCGC
-228 5.3 GTGATAAGAAAAATATATTAG
Streptococcus thermophilus CNRZ1066 str1653 -217 5.8 GTGATATGATTTACTTATCAC
Streptococcus uberis 0140J SUB1415 -80 4.8 GTGATAGGCTTTAACTATTGC