Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Streptococcus gordonii str. Challis substr. CH1

Reference regulog properties
Source regulog: Rex - Streptococcaceae
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Streptococcus gordonii str. Challis substr. CH1
Orthologous TF(s) SGO_1228
Regulated genes 11
Built upon 161 sites [see more]
Predicted regulatory interactions in Streptococcus gordonii str. Challis substr. CH1
Locus tag Position Score Sequence
Position: -140
Score: 5.1
Sequence: TTGAAATATATTTCACAA
Position: -51
Score: 5.8
Sequence: TTGTGAAAAAATTAACAA
Locus tag: SGO_0113
SGO_0113 -140 5.1 TTGAAATATATTTCACAA
-51 5.8 TTGTGAAAAAATTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
Streptococcus agalactiae 2603V/R SAG0053 -113 5.2 TTGAAAAAAAGTTCACAA
-90 5.5 TTGTGAAACTATTTACAA
-35 5.6 TTGTGAAACATTTAACAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0061 -112 5.2 TTGAAAAAAACTTCACAA
-89 5.4 TTGTGAAATGATTTACAA
-34 5.5 TTGTGAAACTTTTAACAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0043 -112 5 TTGAAAAAAACATCACAA
-89 5.4 TTGTGAAATGATTTACAA
-34 5.5 TTGTGAAACTTTTAACAA
Streptococcus gordonii str. Challis substr. CH1 SGO_0113 -140 5.1 TTGAAATATATTTCACAA
-51 5.8 TTGTGAAAAAATTAACAA
Streptococcus mitis B6 smi_0231 -209 4.5 TTGTGAAATAAAAAATAT
-191 5.1 TTGAAATAATTTTCACAA
-141 5.4 ATGAGAAAAATTTCACAA
-97 4.6 TTATGAAACTGTTTACAA
-53 5.8 TTGTGAAAAAATTAACAA
Streptococcus pneumoniae TIGR4 SP_2026 -208 4.5 TTGTGAAATAAAAAATAT
-190 5.1 TTGAAATAAATTTCACAA
-140 5.1 ATGAGAAAAGTTTCACAA
-96 4.6 TTATGAAACTGTTTACAA
-52 5.8 TTGTGAAAAAATTAACAA
Streptococcus sanguinis SK36 SSA_0068 -226 4.3 ATGTGAAATCTTTAAAAT
-156 5 TTGTTATGTATTTCACAA
-67 5.7 TTGTGAAATATTTAACAA
Streptococcus suis 05ZYH33 SSU05_0280 -129 4.5 TTGGGGAAAAGTTAACAA
Streptococcus uberis 0140J SUB0063 -116 5.2 TTGAAAAAAAGTTCACAA
-93 5.5 TTGTGAAACTATTTACAA
-38 5.5 TTGTGAAACTTTTAACAA
Position: -158
Score: 4
Sequence: ATTTGAAAGAATGAACAA
Position: -55
Score: 3.9
Sequence: AAGTTACTCTTTTCACAT
Locus tag: SGO_0207
SGO_0207 -158 4 ATTTGAAAGAATGAACAA
-55 3.9 AAGTTACTCTTTTCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gap
Ortholog function: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Streptococcus agalactiae 2603V/R SAG1768 -76 4.4 AAGTTAATCTTTTCACAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1936 -78 4.7 AAGTTAATCTTTTCACAA
Streptococcus gordonii str. Challis substr. CH1 SGO_0207 -158 4 ATTTGAAAGAATGAACAA
Streptococcus mutans UA159 SMU.360 -81 4.7 AAGTTAATCTTTTCACAA
Streptococcus pyogenes M1 GAS SPy0274 -79 4.7 AAGTTAATCTTTTCACAA
Streptococcus sanguinis SK36 SSA_2108 -157 4.8 TAGTGAAAGAATTCATAA
Streptococcus thermophilus CNRZ1066 str1788 -50 4.7 AAGTTAATCTTTTCACAA
Streptococcus uberis 0140J SUB1630 -78 4.7 AAGTTAATCTTTTCACAA
Position: -46
Score: 4.7
Sequence: TTGTGATATAATTATCAT
Locus tag: SGO_0209
SGO_0209 -46 4.7 TTGTGATATAATTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgk
Ortholog function: Phosphoglycerate kinase (EC 2.7.2.3)
Lactococcus lactis subsp. cremoris SK11 LACR_0248 -91 4.5 TTGTGATATAATTAACCT
Lactococcus lactis subsp. lactis Il1403 L0010 -91 4.5 TTGTGATATAATTAACCT
Streptococcus agalactiae 2603V/R SAG1766 -84 4.7 TTGTGAAAAAGTAATCAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0272 -96 4.3 TTGTGAAATAGTTAATTT
Streptococcus gallolyticus UCN34 GALLO_1995 -137 4.4 TTGTAAAATGATACAGAA
-47 4.5 TTGTGATATAATTAGCAT
Streptococcus gordonii str. Challis substr. CH1 SGO_0209 -46 4.7 TTGTGATATAATTATCAT
Streptococcus mutans UA159 SMU.361 -47 4.7 TTGTGATATAATTATCAT
Streptococcus sanguinis SK36 SSA_0302 -87 4.5 TTGTGAAAATTTTCTTTA
Streptococcus suis 05ZYH33 SSU05_0157 -87 4.4 TTGTGAAAAAAATATCTT
Streptococcus uberis 0140J SUB1629 -96 4.5 TTGTGAAAAAAATAATTT
Position: -52
Score: 5.2
Sequence: TTGTGATATAATTAACAT
Locus tag: SGO_0565
SGO_0565 -52 5.2 TTGTGATATAATTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhB1
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent
Streptococcus agalactiae 2603V/R SAG0054 -118 4.4 TTAAGAATATTTTCAAAA
-73 4.8 TTGTGAAGAATAATACAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0062 -76 5.1 TTGTGAAAAGATATACAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0046 -80 5.1 TTGTGAAAAAGTATACAA
Streptococcus gordonii str. Challis substr. CH1 SGO_0565 -52 5.2 TTGTGATATAATTAACAT
Streptococcus mitis B6 smi_0275 -114 5.1 TTGTGATATACTTCACAT
Streptococcus pneumoniae TIGR4 SP_0285 -114 5.1 TTGTGATATACTTCACAT
Streptococcus pyogenes M1 GAS SPy0044 -67 5 TTGTGAAAAGATGTACAA
Streptococcus sanguinis SK36 SSA_1917 -51 5.2 TTGTGATATAATTAACAT
Streptococcus suis 05ZYH33 SSU05_0279 -82 5.2 TTGTGATATTCTTAACAA
Position: -89
Score: 4.5
Sequence: TTGATAAAAACTTAGCAA
Locus tag: SGO_0762
SGO_0762 -89 4.5 TTGATAAAAACTTAGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tpi
Ortholog function: Triosephosphate isomerase (EC 5.3.1.1)
Streptococcus agalactiae 2603V/R SAG0763 -72 4 TCGTGAAACTTTTAATTA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0629 -97 5.1 TTGTGAAAATATTCCTAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1321 -97 5 TTGTGAAAATATTACTAA
Streptococcus gordonii str. Challis substr. CH1 SGO_0762 -89 4.5 TTGATAAAAACTTAGCAA
Streptococcus pyogenes M1 GAS SPy0613 -97 5.1 TTGTGAAAATATTCCTAA
Streptococcus thermophilus CNRZ1066 str0488 -46 4.7 TTGTGATAAAATAAACGA
Streptococcus uberis 0140J SUB0605 -98 5.2 TTGTGAAAATTATCCCAA
Position: -40
Score: 3.8
Sequence: ATGATATATTGGTCATAA
Locus tag: SGO_1137
SGO_1137 -40 3.8 ATGATATATTGGTCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirC
Ortholog function: Formate/nitrite family of transporters
Streptococcus agalactiae 2603V/R SAG1084 -32 4.5 AAGTTAATAAAATCACAT
Streptococcus gordonii str. Challis substr. CH1 SGO_1137 -40 3.8 ATGATATATTGGTCATAA
Streptococcus mitis B6 smi_1009 -41 4.3 TTGTGATATAATTATCAG
Streptococcus pneumoniae TIGR4 SP_1215 -41 5 TTGTGATATAATTATCAA
Streptococcus sanguinis SK36 SSA_1098 -44 4.5 TTGTGATATACTATACAT
Position: -54
Score: 4.7
Sequence: TAGTTGATTTTTTCACAA
Locus tag: SGO_1228
SGO_1228 -54 4.7 TAGTTGATTTTTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rex
Ortholog function: Redox-sensitive transcriptional regulator Rex, Rex family
Lactococcus lactis subsp. cremoris SK11 LACR_1156 -74 5.3 TTGATAAAATTATCACAA
Lactococcus lactis subsp. lactis Il1403 L71932 -75 5.3 TTGATAAAATTATCACAA
Streptococcus agalactiae 2603V/R SAG1100 -36 4.5 TAATAAAATTTTTAACAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1050 -31 4.4 TAGTTGCATATTTCACAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1228 -54 4.7 TAGTTGATTTTTTCACAA
Streptococcus mitis B6 smi_1188 -57 5 TTGTTGATTTTTTCACAA
Streptococcus mutans UA159 SMU.1053 -117 4.4 TTGTTATAAAAAAAACTA
-58 4.5 ATGTTGCATTTTTCACAA
Streptococcus pneumoniae TIGR4 SP_1090 -57 5 TTGTTGATTTTTTCACAA
Streptococcus pyogenes M1 GAS SPy1120 -76 4.5 ATGTTGCATTTTTCACAA
Streptococcus sanguinis SK36 SSA_1216 -55 4.7 TAGTTGATTTTTTCACAA
Streptococcus suis 05ZYH33 SSU05_1069 -100 4.5 CTGTTGATTTTTTCACAA
Streptococcus thermophilus CNRZ1066 str1463 -39 4.6 TTGTTGCAATCTTCACAA
Streptococcus uberis 0140J SUB0845 -52 4.4 TTGTTACAATAGTAACAT
Position: -118
Score: 3.8
Sequence: TTCTAAAAACGTTTACAT
Locus tag: SGO_1232
SGO_1232 -118 3.8 TTCTAAAAACGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Lactococcus lactis subsp. cremoris SK11 LACR_1455 -63 4.1 TTGTTGAAAAGATTATAT
Lactococcus lactis subsp. lactis Il1403 L0017 -63 4.1 TTGTTGAAAAGATTATAT
Streptococcus agalactiae 2603V/R SAG0959 -102 4.4 TTGCAAATTTTTTCACAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0911 -77 4.2 ATGACAAACAATTCTCAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1022 -79 3.9 ATGACAAAGACATTACAA
Streptococcus gallolyticus UCN34 GALLO_1129 -106 4 TTTTCAAAGTTTTTACAA
Streptococcus gallolyticus UCN34 GALLO_2034 -85 3.8 TTATTATACAATTCCAAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1232 -118 3.8 TTCTAAAAACGTTTACAT
Streptococcus mitis B6 smi_1006 -62 4.2 AAGTGATAAAATTAAAAT
Streptococcus mutans UA159 SMU.1115 -81 4.4 TAGTGACTTTCTTAACAA
Streptococcus pyogenes M1 GAS SPy1151 -77 4.1 ATGACAAACAATTATCAA
Streptococcus sanguinis SK36 SSA_1221 -116 4.5 TTGTAAAAACGTTTACAT
Streptococcus uberis 0140J SUB0879 -77 4.3 GTGACAAACTATTCACAA
Position: -61
Score: 4.6
Sequence: AAGTGATAAAATAAACAA
Locus tag: SGO_1745
SGO_1745 -61 4.6 AAGTGATAAAATAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fba
Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Streptococcus gallolyticus UCN34 GALLO_0255 -60 4.2 TTGTGATAAAATGTACGT
Streptococcus gordonii str. Challis substr. CH1 SGO_1745 -61 4.6 AAGTGATAAAATAAACAA
Streptococcus mutans UA159 SMU.99 -61 4.6 AAGTGATAAAATAAACAA
Streptococcus pneumoniae TIGR4 SP_0605 -62 4.5 AAGTGATAAAATGAACAA
Streptococcus sanguinis SK36 SSA_1992 -62 4.6 AAGTGATAAAATAAACAA