Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Geobacillus sp. G11MC16

Reference regulog properties
Source regulog: FadR - Bacillales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. G11MC16
Orthologous TF(s) G11MC16DRAFT_2660
Regulated genes 5
Built upon 48 sites [see more]
Predicted regulatory interactions in Geobacillus sp. G11MC16
Locus tag Position Score Sequence
Position: -34
Score: 5.9
Sequence: ATGAATGAACCATCAGTCAT
Locus tag: G11MC16DRAFT_0274
G11MC16DRAFT_0274 -34 5.9 ATGAATGAACCATCAGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ykuF
Ortholog function: 2,4-dienoyl-CoA reductase, mitochondrial precursor (EC 1.3.1.34)
Bacillus subtilis subsp. subtilis str. 168 BSU14060 -36 6.4 TTGAATGAATAATCATTCAC
Bacillus amyloliquefaciens FZB42 RBAM_013850 -40 6.8 ATGAATGATTATTCATTCAA
Bacillus pumilus SAFR-032 BPUM_1303 -40 6.7 ATGAATGAATAGTCATTCAA
Bacillus licheniformis DSM 13 BLi01620 -36 6.8 TTGAATGAATACTCATTCAT
Anoxybacillus flavithermus WK1 Aflv_1909 -37 6.5 ATGAATGAATAACCATTCAT
Geobacillus kaustophilus HTA426 GK1044 -34 6.5 ATGAATGAGTAATCAGTCAT
Bacillus cereus ATCC 14579 BC3990 -29 5.2 ATGAATGTGTATTCATTTTT
Bacillus halodurans C-125 BH2144 -38 6.8 TTGAATGAATATTCATTCAA
Position: -35
Score: 6.5
Sequence: ATGAATGGGTATTCATTCAT
Locus tag: G11MC16DRAFT_0611
G11MC16DRAFT_0611 -35 6.5 ATGAATGGGTATTCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lcfB
Ortholog function: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Anoxybacillus flavithermus WK1 Aflv_2253 -41 6.3 ATGAATGATGATTCATTCAT
Geobacillus kaustophilus HTA426 GK0668 -38 6.3 ATGAATGGTCATTCATTCAT
Oceanobacillus iheyensis HTE831 OB1176 -41 6.9 ATGAATGAGTATTCATTCAT
Position: -69
Score: 6.3
Sequence: ATGAATGAACATTCATTCTT
Locus tag: G11MC16DRAFT_0971
G11MC16DRAFT_0971 -69 6.3 ATGAATGAACATTCATTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_1606
Ortholog function: hypothetical Zn-dependent hydrolase
Anoxybacillus flavithermus WK1 Aflv_1606 -53 6.5 ATGAATGAATATTCATTCTT
Geobacillus kaustophilus HTA426 GK1401 -76 5.5 AAAAATGAATGATCATTCAT
Bacillus clausii KSM-K16 ABC0525 -38 6.4 GTGAATGATTACTCATTCAT
Oceanobacillus iheyensis HTE831 OB0204 -73 6.6 ATGACTGATTATTCATTCAT
Position: -107
Score: 6.3
Sequence: TTGACTGAATGCTCATTCAT
Locus tag: G11MC16DRAFT_2245
G11MC16DRAFT_2245 -107 6.3 TTGACTGAATGCTCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadF
Ortholog function: Fe-S oxidoreductase
Bacillus subtilis subsp. subtilis str. 168 BSU37180 -98 6.3 TTGACTGAACACTCATTCAT
Bacillus amyloliquefaciens FZB42 RBAM_034330 -82 6.3 TTGACTGAACACTCATTCAT
Bacillus pumilus SAFR-032 BPUM_3374 -88 6.6 TTGACTGAATACTCATTCAT
Bacillus licheniformis DSM 13 BLi03969 -82 6.3 TTGACTGAACACTCATTCAT
Anoxybacillus flavithermus WK1 Aflv_2740 -85 6.3 TTGACTGAATGCTCATTCAT
Geobacillus kaustophilus HTA426 GK3398 -106 6.3 TTGACTGAATGCTCATTCAT
Bacillus cereus ATCC 14579 BC5345 -115 5.9 TTGACTGAATGCTCACTCAT
Bacillus halodurans C-125 BH3802 -123 6.5 ATGAGTGAATACTCATTCAT
Bacillus clausii KSM-K16 ABC3892 -109 6.2 CTGACTGAATGCTCATTCAT
Oceanobacillus iheyensis HTE831 OB3014 -106 6.3 TTGACTGAATGATCATTCAT
Position: -57
Score: 6.2
Sequence: GTGAATGATTATTCATTCAG
Locus tag: G11MC16DRAFT_2660
G11MC16DRAFT_2660 -57 6.2 GTGAATGATTATTCATTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadR
Ortholog function: Transcriptional regulator of fatty acids degradation, TetR family
Bacillus subtilis subsp. subtilis str. 168 BSU28550 -44 6.9 ATGAATGAATAGTCATTCAT
Bacillus amyloliquefaciens FZB42 RBAM_025610 -38 6.9 ATGAATGAATAGTCATTCAT
Bacillus pumilus SAFR-032 BPUM_2512 -41 6.8 ATGAATGAATACTCATTCAA
Bacillus licheniformis DSM 13 BLi03002 -43 6.9 ATGAATGAGTATTCATTCAT
Anoxybacillus flavithermus WK1 Aflv_0565 -44 6.9 ATGAATGATTATTCATTCAT
Geobacillus kaustophilus HTA426 GK2689 -60 6.1 ATGAATGATGGTTCATTCAT
Bacillus cereus ATCC 14579 BC4525 -45 6.6 ATGAATGACTATTCATTCAG
Bacillus halodurans C-125 BH3102 -38 6.9 ATGAATGAATACTCATTCAT
Bacillus clausii KSM-K16 ABC2672 -45 6.8 ATGAATGAACATTCATTCAT
Oceanobacillus iheyensis HTE831 OB2121 -50 5.9 ATGAATGATCATTCACTCAG
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