Propagation of PerR regulog to Geobacillus thermodenitrificans NG80-2
| Source regulog: | PerR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response; Peroxide stress response |
| Effector: | Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Geobacillus thermodenitrificans NG80-2 |
| Orthologous TF(s) | GTNG_0490 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -63
Score: 4.4 Sequence: GTAGACTAATTATAA
Position: -54
Score: 5.5 Sequence: TTATAAATATTATAA
Position: -37
Score: 4.4 Sequence: TGATAATTTTTTTTA
Locus tag: GTNG_0490
|
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| GTNG_0490 | -63 | 4.4 | GTAGACTAATTATAA | |
| -54 | 5.5 | TTATAAATATTATAA | ||
| -37 | 4.4 | TGATAATTTTTTTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: perR | ||||
| Ortholog function: Transcriptional regulator of peroxide stress response, Fur family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU08730 | -51 | 5 | TTATAAACATTACAA |
| -34 | 4.2 | TAAGAATTTTTTTTA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_008820 | -51 | 5.4 | TTATAAACATTATAA |
| -34 | 4.4 | TAATAATCTTTTTTA | ||
| Bacillus pumilus SAFR-032 | BPUM_0827 | -50 | 5.4 | TTATAAAGATTATAA |
| Bacillus licheniformis DSM 13 | BLi00900 | -50 | 4.9 | TTATAAACGTTATAA |
| -33 | 4.2 | TAAGAATTTTTTTTA | ||
| Anoxybacillus flavithermus WK1 | Aflv_0369 | -38 | 5.5 | TTATAAAAATTATAA |
| -15 | 5.5 | TTATAATTTTTATAA | ||
| Geobacillus kaustophilus HTA426 | GK0478 | -61 | 5.5 | TTATAAATATTATAA |
| -44 | 4.2 | TGATAATTTTTTTCA | ||
| Bacillus cereus ATCC 14579 | BC0518 | -43 | 5.4 | TTATAAGAATTATAA |
| Bacillus halodurans C-125 | BH0951 | -54 | 5.4 | TTATAAAGATTATAA |
| Bacillus clausii KSM-K16 | ABC1322 | -50 | 5.2 | TTATAATTAATATAA |
| Oceanobacillus iheyensis HTE831 | OB0905 | -66 | 5.3 | TTATAAGGATTATAA |
| -49 | 4.3 | TAATAATTTTATTAA | ||
| Paenibacillus sp. JDR-2 | Pjdr2_1094 | -209 | 4.1 | TTGGAAGCATTACAA |
|
Position: -168
Score: 4.5 Sequence: TTAAAGTCATTTCAA
Locus tag: GTNG_0697
|
||||
| GTNG_0697 | -168 | 4.5 | TTAAAGTCATTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spxA | ||||
| Ortholog function: Transcriptional regulator | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11500 | -65 | 4.5 | TTAGAGTAATTTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_011500 | -90 | 4.3 | GTATAATACCTATAA |
| -64 | 4.5 | TTAAAGTCATTTCAA | ||
| Bacillus pumilus SAFR-032 | BPUM_1077 | -91 | 4.8 | GTATAATCACTATAA |
| -65 | 4.9 | TTAGAACAATTTTAA | ||
| Bacillus licheniformis DSM 13 | BLi01238 | -62 | 4.5 | TTAGAGTTATTTCAA |
| Anoxybacillus flavithermus WK1 | Aflv_2127 | -75 | 5 | TTAAAGTCATTTTAA |
| Geobacillus kaustophilus HTA426 | GK0817 | -165 | 4.5 | TTAAAGTCATTTCAA |
| Bacillus cereus ATCC 14579 | BC1188 | -181 | 4.9 | GTATAATGATTATAG |
| Oceanobacillus iheyensis HTE831 | OB1213 | -72 | 4.8 | TTAGACTAATTTTAA |
|
Position: -83
Score: 4.6 Sequence: TGAGAATGTTTATAA
Position: -74
Score: 4.4 Sequence: TTATAATACGTATAG
Locus tag: GTNG_2221
|
||||
| GTNG_2221 | -83 | 4.6 | TGAGAATGTTTATAA | |
| -74 | 4.4 | TTATAATACGTATAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ypzK | ||||
| Ortholog function: GCN5-related N-acetyltransferase (GNAT) domain protein | ||||
| Bacillus pumilus SAFR-032 | BPUM_2058 | -85 | 4.8 | TAAAAATGTTTATAA |
| Bacillus licheniformis DSM 13 | BLi02471 | -74 | 4.8 | TAAAAATGTTTATAA |
| Anoxybacillus flavithermus WK1 | Aflv_1019 | -86 | 4.1 | TTAAAAAATGTTTAA |
| Geobacillus kaustophilus HTA426 | GK2293 | -83 | 4.6 | TGAGAATGTTTATAA |
| Bacillus cereus ATCC 14579 | BC4060 | -87 | 4.3 | TTGAAAATATTGTAA |
| -30 | 4 | TTGTAACTTTTGTAA | ||
| Oceanobacillus iheyensis HTE831 | OB1830 | -136 | 5 | TTATACTAATTCTAA |
|
Position: -50
Score: 5.4 Sequence: TTAAAATCATTTTAA
Locus tag: GTNG_2506
|
||||
| GTNG_2506 | -50 | 5.4 | TTAAAATCATTTTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ahpC | ||||
| Ortholog function: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU40090 | -60 | 4.9 | TTAGAATTATTATTG |
| Bacillus amyloliquefaciens FZB42 | RBAM_036960 | -79 | 4.9 | TTAGAATTATTATTG |
| Bacillus licheniformis DSM 13 | BLi04291 | -70 | 5.6 | TTATAATAATTATAG |
| Anoxybacillus flavithermus WK1 | Aflv_2773 | -100 | 5.5 | TTATAATTGTTATAA |
| Geobacillus kaustophilus HTA426 | GK2575 | -44 | 5.7 | TTAAAATTATTATAA |
| Bacillus cereus ATCC 14579 | BC0377 | -88 | 5.3 | TTAGAATTATTATAG |
|
Position: -29
Score: 5.6 Sequence: TAATAATTATTATAA
Locus tag: GTNG_2783
|
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| GTNG_2783 | -29 | 5.6 | TAATAATTATTATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: czcD | ||||
| Ortholog function: Co/Zn/Cd efflux system component | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0372 | -57 | 5.1 | TTATAGTAATTATTA |
| Geobacillus kaustophilus HTA426 | GK2881 | -31 | 5.4 | TGATAATTATTATAA |
| Paenibacillus sp. JDR-2 | Pjdr2_4210 | -37 | 5.5 | TTATAATCATTCTAA |