Propagation of Crp regulog to Anabaena variabilis ATCC 29413

Reference regulog properties
Source regulog:	Crp - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	repressor (activator)
Biological process:
Effector:	Cyclic 3',5'-AMP
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Anabaena variabilis ATCC 29413
Orthologous TF(s)	Ava_3066
Regulated genes	24

Built upon 106 sites [see more]

Predicted regulatory interactions in *Anabaena variabilis ATCC 29413*
	Locus tag	Position	Score	Sequence
Position: -42 Score: 3.7 Sequence: TGTTGTCAAAGTCAAA Locus tag: Ava_0423
	Ava_0423	-42	3.7	TGTTGTCAAAGTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis regulator, DeoR family
Cyanothece sp. ATCC 51142	cce_0683	-95	3.9	TGTTGTCAAAGTCACA
Cyanothece sp. PCC 8801	PCC8801_0414	-41	3.8	GTTGATTTAAGTCCTA
Microcystis aeruginosa NIES-843	MAE_23100	-128	3.7	TGTTGTCAAAGTCACG
Nostoc sp. PCC 7120	all2491	-42	3.7	TGTTGTCAAAGTCAAA
Prochlorococcus marinus str. MIT 9313	PMT1607	-71	3.9	CCTGATCTAAGGCAAC

Position: -166 Score: 3.1 Sequence: TCTGGAATAATTCCCC Position: -6 Score: 3.1 Sequence: GGTGGTATGCAGCAAA Locus tag: Ava_0446
	Ava_0446	-166	3.1	TCTGGAATAATTCCCC
		-6	3.1	GGTGGTATGCAGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
Nostoc sp. PCC 7120	alr2514	-222	3.1	TCTGGAATAATTCCCC
Trichodesmium erythraeum IMS101	Tery_1779	-193	4	TGTAACCTAAAACAAA
		-93	3.9	TCTGAGAAATATCAAA

Position: -44 Score: 4.3 Sequence: AATGATATAGTTCACG Locus tag: Ava_0490
	Ava_0490	-44	4.3	AATGATATAGTTCACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Cyanothece sp. ATCC 51142	cce_0800	-23	3.6	CATGATTTTATTCAGA
Cyanothece sp. PCC 8801	PCC8801_3887	-203	4.3	GGTGACAGAAATCAAA
Microcystis aeruginosa NIES-843	MAE_02800	-44	3.6	TTTGATTATGATCGCC
Nostoc sp. PCC 7120	all2561	-44	4.4	AATGATATAGCTCACA
Synechococcus elongatus PCC 7942	Synpcc7942_2079	-63	4.2	TGTGATTAAGCACACA

Position: -54 Score: 4.2 Sequence: GTTGATTTAATTCATA Locus tag: Ava_0631
	Ava_0631	-54	4.2	GTTGATTTAATTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_0244
Ortholog function: Conserved hypothetical protein
Cyanothece sp. ATCC 51142	cce_0244	-138	4.6	GGTGATTTAAGTCATC
Nostoc sp. PCC 7120	all1210	-54	4.2	GTTGATTTAATTCATA
Trichodesmium erythraeum IMS101	Tery_3463	-345	4	AATGATCAAAATTATA

Position: -56 Score: 3.8 Sequence: TATGATTGGGGTCAAA Position: -1 Score: 4.1 Sequence: TGTGATTAGAGTCGCA Locus tag: Ava_2318
	Ava_2318	-56	3.8	TATGATTGGGGTCAAA
		-1	4.1	TGTGATTAGAGTCGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gap2
Ortholog function: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
Synechococcus sp. PCC 7002	SYNPCC7002_A0106	-65	3.7	TATGATTGGGGTCATC
Cyanothece sp. PCC 8801	PCC8801_2557	-31	4	ATTGAGCTAAAGCATA
Nostoc sp. PCC 7120	all5062	-56	3.8	TATGATTGGGGTCAAA
		-1	4.1	TGTGATTAGAGTCGCA
Trichodesmium erythraeum IMS101	Tery_4030	-410	3.6	TATGATAATTCTCAAG

Position: 8 Score: 3.6 Sequence: TTTGTTTAAAATTACA Locus tag: Ava_2623
	Ava_2623	8	3.6	TTTGTTTAAAATTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcC
Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated
Cyanothece sp. ATCC 51142	cce_2911	5	4.1	AATGTTTAAAGTCACC
Cyanothece sp. PCC 8801	PCC8801_2788	5	3.9	GATGTTTAAAGTCACC
Microcystis aeruginosa NIES-843	MAE_10240	5	4.1	GATGTTCAAAATCACC
Trichodesmium erythraeum IMS101	Tery_3647	5	4.2	AATGTTTAAGATCACA
Synechococcus sp. JA-3-3Ab	CYA_2225	5	3.7	CATGTTTAAGATCACG
Synechococcus sp. WH 8102	SYNW0483	5	3.9	GTTGTTCAAAGTCACC
Thermosynechococcus elongatus BP-1	null	-233	3.6	CATGAAAGAAGTCACC

Position: -65 Score: 4.3 Sequence: TGTGATAAAAATTAAA Locus tag: Ava_2980
	Ava_2980	-65	4.3	TGTGATAAAAATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cupS
Ortholog function: Carbon dioxide uptake protein
Synechococcus sp. PCC 7002	SYNPCC7002_A0175	-300	4	CGTGATTTTGCTCAAC
Cyanothece sp. PCC 8801	PCC8801_1006	-199	4.2	ACTGATTTAATTCACT
Nostoc sp. PCC 7120	alr1320	-141	4.2	TTTGATAATTATCATA
		-62	4.3	TGTGATAAAAATTAAA
Synechococcus sp. JA-3-3Ab	CYA_0636	-325	4.3	TGTGATTTTGCTCAAC

Position: -161 Score: 3.7 Sequence: TGTGATATTTTTCCAC Locus tag: Ava_3548
	Ava_3548	-161	3.7	TGTGATATTTTTCCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppa
Ortholog function: inorganic pyrophosphatase
Cyanothece sp. ATCC 51142	cce_4329	-265	4.5	TGTGATTATTATCAAA
		-104	4.4	TGTGATTATTATCAAC
Cyanothece sp. PCC 8801	PCC8801_2042	-177	4	TGTGATACTCATCATA
Cyanothece sp. PCC 7425	Cyan7425_1645	-273	3.7	ACTGATTAAGGGCACT
Nostoc sp. PCC 7120	all3570	-160	3.7	TGTGATATTTTTCCAC
Trichodesmium erythraeum IMS101	Tery_1519	-237	3.9	AATGATAGAGTTCACG

Position: -344 Score: 3.1 Sequence: ACTGCTATAAATCTTA Locus tag: Ava_3912
	Ava_3912	-344	3.1	ACTGCTATAAATCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifB
Ortholog function: FeMo nitrogenase cofactor biosynthesis protein
Cyanothece sp. ATCC 51142	cce_0554	-123	4	GGTGGTATAAATGACA
Cyanothece sp. PCC 7425	Cyan7425_2361	-40	3.9	ACTGTTATAAAGCACC
Nostoc sp. PCC 7120	all1517	-299	3.1	ACTGCTATAAATCTTA
Trichodesmium erythraeum IMS101	Tery_4133	-356	3.7	TATGACTTATAGCATG

Position: -43 Score: 3.1 Sequence: AGTAACCAATATCTAA Locus tag: Ava_3931
	Ava_3931	-43	3.1	AGTAACCAATATCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Cyan7425_4795
Ortholog function: Mo-dependent nitrogenase family protein
Nostoc sp. PCC 7120	all1439	-343	3.1	GATGAAATGGATCGCA

Position: 21 Score: 4.3 Sequence: AGTGACCGAATTCATA Locus tag: Ava_3934
	Ava_3934	21	4.3	AGTGACCGAATTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifX
Ortholog function: Nitrogen fixation protein
Cyanothece sp. PCC 8801	PCC8801_1790	21	4.3	AGTGACAATGTTCATA
Nostoc sp. PCC 7120	all1436	21	4.3	AGTGACAGAATTCATA
Trichodesmium erythraeum IMS101	Tery_4140	21	4.3	ACTGATTTTATTCATA

Position: -283 Score: 3.1 Sequence: TATAAATAAAAACATC Locus tag: Ava_4244
	Ava_4244	-283	3.1	TATAAATAAAAACATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifB
Ortholog function: FeMo nitrogenase cofactor biosynthesis protein
Cyanothece sp. ATCC 51142	cce_0554	-123	4	GGTGGTATAAATGACA
Cyanothece sp. PCC 7425	Cyan7425_2361	-40	3.9	ACTGTTATAAAGCACC
Nostoc sp. PCC 7120	all1517	-299	3.1	ACTGCTATAAATCTTA
Trichodesmium erythraeum IMS101	Tery_4133	-356	3.7	TATGACTTATAGCATG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Crp regulog to Anabaena variabilis ATCC 29413

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --