Propagation of LexA regulog to Anabaena variabilis ATCC 29413
| Source regulog: | LexA - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Anabaena variabilis ATCC 29413 |
| Orthologous TF(s) | Ava_2198 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -28
Score: 5.1 Sequence: AGTACTTATGTACT
Locus tag: Ava_1462
|
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| Ava_1462 | -28 | 5.1 | AGTACTTATGTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ssb | ||||
| Ortholog function: single-stranded DNA-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0119 | -25 | 3.9 | AGAACAGTTGTATG |
| Cyanothece sp. PCC 7425 | Cyan7425_1469 | -18 | 4.1 | AGTACAGGTAAACT |
| Microcystis aeruginosa NIES-843 | MAE_39060 | -33 | 4.3 | CATACTATTGTACT |
| Nostoc sp. PCC 7120 | alr0088 | -28 | 5.1 | AGTACTTATGTACT |
|
Position: -47
Score: 4.8 Sequence: AGTACTAATGTTCT
Locus tag: Ava_2198
|
||||
| Ava_2198 | -47 | 4.8 | AGTACTAATGTTCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lexA | ||||
| Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88) | ||||
| Cyanothece sp. ATCC 51142 | cce_1899 | -32 | 4.7 | AGTACCCATGTTCT |
| Cyanothece sp. PCC 8801 | PCC8801_2186 | -75 | 4.3 | AGTACTTATGTTCG |
| Cyanothece sp. PCC 7425 | Cyan7425_1233 | -131 | 4.5 | GATACAAGTGTTCT |
| Nostoc sp. PCC 7120 | alr4908 | -47 | 4.8 | AGTACTAATGTTCT |
| Prochlorococcus marinus str. MIT 9313 | PMT0380 | -28 | 4.6 | GGTACACATGTATT |
|
Position: -46
Score: 4.4 Sequence: ACTACACTTGTATT
Locus tag: Ava_4458
|
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| Ava_4458 | -46 | 4.4 | ACTACACTTGTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0856 | ||||
| Ortholog function: Conserved hypothetical protein, no COGs | ||||
| Cyanothece sp. ATCC 51142 | cce_3128 | -34 | 3.8 | ACTACACTTATATT |
| Cyanothece sp. PCC 8801 | PCC8801_1259 | -47 | 4.4 | ACTACACTTGTATT |
| Cyanothece sp. PCC 7425 | Cyan7425_4886 | -52 | 4.4 | ACTACACTTGTATT |
| Nostoc sp. PCC 7120 | all0854 | -46 | 4.4 | ACTACACTTGTATT |
| Synechococcus sp. JA-3-3Ab | CYA_0805 | -39 | 3.7 | GCTACAGGAGTAGT |
| Gloeobacter violaceus PCC 7421 | gll1134 | -45 | 4.2 | ACTACGGCTATACT |
|
Position: -67
Score: 4.6 Sequence: AGTATATCTGTTCT
Locus tag: Ava_4925
|
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| Ava_4925 | -67 | 4.6 | AGTATATCTGTTCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: recA | ||||
| Ortholog function: Recombinase A | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0426 | -64 | 4.3 | AGTACGATTGAACT |
| Cyanothece sp. ATCC 51142 | cce_4639 | -47 | 4.8 | AATACTTTTGTACT |
| Cyanothece sp. PCC 7425 | Cyan7425_1671 | -39 | 4.5 | AGTACGGATATACT |
| Microcystis aeruginosa NIES-843 | MAE_16070 | -40 | 4.6 | CATACTGCTGTACT |
| Nostoc sp. PCC 7120 | all3272 | -66 | 4.6 | AGTATATCTGTTCT |
| Prochlorococcus marinus str. MIT 9313 | PMT1727 | -145 | 4.9 | GGTACGTCTGTACT |
| Synechococcus sp. WH 8102 | SYNW2062 | -78 | 4.7 | CGTACGCCTGTACT |