Propagation of Crp regulog to Trichodesmium erythraeum IMS101

Reference regulog properties
Source regulog:	Crp - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	repressor (activator)
Biological process:
Effector:	Cyclic 3',5'-AMP
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Trichodesmium erythraeum IMS101
Orthologous TF(s)	Tery_1557
Regulated genes	21

Built upon 106 sites [see more]

Predicted regulatory interactions in *Trichodesmium erythraeum IMS101*
	Locus tag	Position	Score	Sequence
Position: -50 Score: 4.7 Sequence: AATGATCTTAATCAAA Locus tag: Tery_0156
	Tery_0156	-50	4.7	AATGATCTTAATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2113
Ortholog function: Transglutaminase-like protein
Synechocystis sp. PCC 6803	sll1608	-188	3.8	AATGATAAACATCACT
Cyanothece sp. PCC 8801	PCC8801_3693	-115	4.2	ATTGATATTAATCAAT
Cyanothece sp. PCC 7425	Cyan7425_1077	-107	4.8	AGTGATCAAAGTCATG
Trichodesmium erythraeum IMS101	Tery_0156	-50	4.7	AATGATCTTAATCAAA

Position: -237 Score: 3.9 Sequence: AATGATAGAGTTCACG Locus tag: Tery_1519
	Tery_1519	-237	3.9	AATGATAGAGTTCACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppa
Ortholog function: inorganic pyrophosphatase
Cyanothece sp. ATCC 51142	cce_4329	-265	4.5	TGTGATTATTATCAAA
		-104	4.4	TGTGATTATTATCAAC
Cyanothece sp. PCC 8801	PCC8801_2042	-177	4	TGTGATACTCATCATA
Cyanothece sp. PCC 7425	Cyan7425_1645	-273	3.7	ACTGATTAAGGGCACT
Nostoc sp. PCC 7120	all3570	-160	3.7	TGTGATATTTTTCCAC
Trichodesmium erythraeum IMS101	Tery_1519	-237	3.9	AATGATAGAGTTCACG

Position: -259 Score: 4.2 Sequence: CATGATCAAAGTCAAG Locus tag: Tery_1557
	Tery_1557	-259	4.2	CATGATCAAAGTCAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: crp
Ortholog function: cAMP responsive transcription regulator, Fnr-Crp family
Synechocystis sp. PCC 6803	sll1371	-159	4	AGTGAAAAAACTCACT
Synechocystis sp. PCC 6803	sll1924	-106	4.5	TGTGACAATAAACACC
Trichodesmium erythraeum IMS101	Tery_1557	-259	4.2	CATGATCAAAGTCAAG

Position: -207 Score: 3.2 Sequence: ATTGGGTTAAGGCAAA Position: -116 Score: 3.5 Sequence: TATGATTTAATTCTTG Position: 15 Score: 3.1 Sequence: ATTGATACAACTAATA Locus tag: Tery_1777
	Tery_1777	-207	3.2	ATTGGGTTAAGGCAAA
		-116	3.5	TATGATTTAATTCTTG
		15	3.1	ATTGATACAACTAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
Cyanothece sp. ATCC 51142	cce_1975	-78	3.7	TGTGATAAAAAAGCCA
Nostoc sp. PCC 7120	alr2516	-222	3.1	TCTGGAATAATTCCCC

Position: -193 Score: 4 Sequence: TGTAACCTAAAACAAA Position: -93 Score: 3.9 Sequence: TCTGAGAAATATCAAA Position: -41 Score: 3 Sequence: TTTGGTGAATTTCACC Locus tag: Tery_1779
	Tery_1779	-193	4	TGTAACCTAAAACAAA
		-93	3.9	TCTGAGAAATATCAAA
		-41	3	TTTGGTGAATTTCACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
Nostoc sp. PCC 7120	alr2514	-222	3.1	TCTGGAATAATTCCCC
Trichodesmium erythraeum IMS101	Tery_1779	-193	4	TGTAACCTAAAACAAA
		-93	3.9	TCTGAGAAATATCAAA

Position: -345 Score: 4 Sequence: AATGATCAAAATTATA Locus tag: Tery_3463
	Tery_3463	-345	4	AATGATCAAAATTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_0244
Ortholog function: Conserved hypothetical protein
Cyanothece sp. ATCC 51142	cce_0244	-138	4.6	GGTGATTTAAGTCATC
Nostoc sp. PCC 7120	all1210	-54	4.2	GTTGATTTAATTCATA
Trichodesmium erythraeum IMS101	Tery_3463	-345	4	AATGATCAAAATTATA

Position: 5 Score: 4.2 Sequence: AATGTTTAAGATCACA Locus tag: Tery_3647
	Tery_3647	5	4.2	AATGTTTAAGATCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcC
Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated
Cyanothece sp. ATCC 51142	cce_2911	5	4.1	AATGTTTAAAGTCACC
Cyanothece sp. PCC 8801	PCC8801_2788	5	3.9	GATGTTTAAAGTCACC
Microcystis aeruginosa NIES-843	MAE_10240	5	4.1	GATGTTCAAAATCACC
Trichodesmium erythraeum IMS101	Tery_3647	5	4.2	AATGTTTAAGATCACA
Synechococcus sp. JA-3-3Ab	CYA_2225	5	3.7	CATGTTTAAGATCACG
Synechococcus sp. WH 8102	SYNW0483	5	3.9	GTTGTTCAAAGTCACC
Thermosynechococcus elongatus BP-1	null	-233	3.6	CATGAAAGAAGTCACC

Position: -336 Score: 4 Sequence: CTTGACTTTAGTCAAA Position: -118 Score: 4.1 Sequence: TGTGTTTGATATCACA Locus tag: Tery_3916
	Tery_3916	-336	4	CTTGACTTTAGTCAAA
		-118	4.1	TGTGTTTGATATCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigF
Ortholog function: RNA polymerase sigma-37
Synechococcus sp. PCC 7002	SYNPCC7002_A1924	-223	4.3	TTTGATAAAAATCAAT
Cyanothece sp. PCC 8801	PCC8801_4329	-271	3.7	AGTGACCTAAATTCCG
Cyanothece sp. PCC 7425	Cyan7425_3949	-91	4.4	TGTGTTCTAGATCACT
Trichodesmium erythraeum IMS101	Tery_3916	-118	4.1	TGTGTTTGATATCACA
Thermosynechococcus elongatus BP-1	null	-174	4.7	TGTGGTCAAGATCACA

Position: -243 Score: 3.1 Sequence: GATAATTGGAATCACT Position: -197 Score: 3.2 Sequence: TATCATAATAAACACT Locus tag: Tery_4133
	Tery_4133	-243	3.1	GATAATTGGAATCACT
		-197	3.2	TATCATAATAAACACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifB
Ortholog function: FeMo nitrogenase cofactor biosynthesis protein
Cyanothece sp. ATCC 51142	cce_0554	-123	4	GGTGGTATAAATGACA
Cyanothece sp. PCC 7425	Cyan7425_2361	-40	3.9	ACTGTTATAAAGCACC
Nostoc sp. PCC 7120	all1517	-299	3.1	ACTGCTATAAATCTTA
Trichodesmium erythraeum IMS101	Tery_4133	-356	3.7	TATGACTTATAGCATG

Position: 21 Score: 4.3 Sequence: ACTGATTTTATTCATA Locus tag: Tery_4140
	Tery_4140	21	4.3	ACTGATTTTATTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifX
Ortholog function: Nitrogen fixation protein
Cyanothece sp. PCC 8801	PCC8801_1790	21	4.3	AGTGACAATGTTCATA
Nostoc sp. PCC 7120	all1436	21	4.3	AGTGACAGAATTCATA
Trichodesmium erythraeum IMS101	Tery_4140	21	4.3	ACTGATTTTATTCATA

Position: -98 Score: 4.2 Sequence: AGTGACTCAAGTCAAC Locus tag: Tery_4143
	Tery_4143	-98	4.2	AGTGACTCAAGTCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hesA
Ortholog function: Nitrogen fixation related protein
Trichodesmium erythraeum IMS101	Tery_4143	-98	4.2	AGTGACTCAAGTCAAC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Crp regulog to Trichodesmium erythraeum IMS101

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --