Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SmtB regulog to Lyngbya sp. PCC 8106

Reference regulog properties
Source regulog: SmtB - Cyanobacteria
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process: Zinc resistance
Effector: Zinc ion, (Zn2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Lyngbya sp. PCC 8106
Orthologous TF(s) L8106_28421
Regulated genes 1
Built upon 16 sites [see more]
Predicted regulatory interactions in Lyngbya sp. PCC 8106
Locus tag Position Score Sequence
Position: -62
Score: 6.9
Sequence: TATATCTGAATATCTGTTCAGATGTT
Locus tag: L8106_28241
L8106_28241 -62 6.9 TATATCTGAATATCTGTTCAGATGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: smtA
Ortholog function: Metallothionein
Cyanothece sp. PCC 8801 PCC8801_0861 -71 6.9 AATATCTGAATACCTGTTCAGATGTT
Synechococcus elongatus PCC 7942 Synpcc7942_1290 -74 6.3 CATACCTGAATCAAGATTCAGATGTT
-42 7.1 AACACATGAACAGTTATTCAGATATT
Synechococcus sp. PCC 7002 SYNPCC7002_A2563 -85 7.2 AATACCTGAATAATTGTTCATGTGTT
-53 6.2 AAAATGTGAACAATCGTTCAACTATT
Thermosynechococcus elongatus BP-1 tsl1016 (deprecated) -79 5.9 GACGTATGAACAGTTGTTCAAGTATA
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