Propagation of NtcA regulog to Lyngbya sp. PCC 8106

Reference regulog properties
Source regulog:	NtcA - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	2-oxoglutarate
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Lyngbya sp. PCC 8106
Orthologous TF(s)	L8106_14710
Regulated genes	24

Built upon 228 sites [see more]

Predicted regulatory interactions in *Lyngbya sp. PCC 8106*
	Locus tag	Position	Score	Sequence
Position: -345 Score: 4.5 Sequence: TGTATTATCTGATACC Locus tag: L8106_01867
	L8106_01867	-345	4.5	TGTATTATCTGATACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupS
Ortholog function: NiFe uptake hydrogenase, small subunit
Cyanothece sp. ATCC 51142	cce_1063	-204	4.8	TGTAAAATTTAATACA
		-159	3.8	GGTAATAATTAATAGA
Cyanothece sp. PCC 8801	PCC8801_3212	-127	4.3	TGTAACAACAATAACA
Trichodesmium erythraeum IMS101	Tery_3369	-188	4.3	AGTATCAAAAATAACA

Position: -81 Score: 4.2 Sequence: TGTATCAACCTCTACT Locus tag: L8106_02207
	L8106_02207	-81	4.2	TGTATCAACCTCTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ntcB
Ortholog function: Nitrogen assimilation transcriptional activator, LysR family
Synechococcus sp. PCC 7002	SYNPCC7002_A1632	-87	3.9	TGTAACATccGgaACA
Cyanothece sp. ATCC 51142	cce_0198	-73	4.2	AGTATCAATTTCTACG
Cyanothece sp. PCC 8801	PCC8801_2329	-80	4.7	TGTATCAAATTCTACT
Cyanothece sp. PCC 7425	Cyan7425_1599	-78	4.6	TGTATCACTATCTACA
Microcystis aeruginosa NIES-843	MAE_09380	-80	4.1	gGTAgCAatTtcTACc
Nostoc sp. PCC 7120	all0602	-80	4.5	TGTAACAAAATCTACC
		-21	4.7	TGTAATTAAGGCTACA
Trichodesmium erythraeum IMS101	Tery_4333	-27	4	TGTATAAAATAACACA
Synechococcus elongatus PCC 7942	Synpcc7942_1242	-153	4.3	AGTAATCATTGATACT
		-82	4.9	AGTAGCAATTGCTACA
Synechococcus sp. JA-3-3Ab	CYA_0984	-89	4.2	TGTAACGGTGTTTACA
Gloeobacter violaceus PCC 7421	gvip213	-46	4	CGTAACCCCAGATACA
Thermosynechococcus elongatus BP-1	null	-122	3.9	TGTATCAATCAACACA

Position: -269 Score: 4.7 Sequence: TGTAACTTTTGCTACG Position: -112 Score: 4.1 Sequence: TGTTAAATCTAATACA Locus tag: L8106_10091
	L8106_10091	-269	4.7	TGTAACTTTTGCTACG
		-112	4.1	TGTTAAATCTAATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirA
Ortholog function: Nitrite reductase, ferredoxin dependent
Synechococcus sp. PCC 7002	SYNPCC7002_A1827	-111	4	CGTAGTTAACACTACA
Synechocystis sp. PCC 6803	slr0898	-74	4.7	TGTAATTTACGTTACA
Cyanothece sp. ATCC 51142	cce_1223	-76	4.7	TGTTACATTAGCTACA
Cyanothece sp. PCC 8801	PCC8801_2468	-75	4.6	TGTTACAATTAATACA
Cyanothece sp. PCC 7425	Cyan7425_4573	-123	4.5	TGTAACTTAATATACC
Microcystis aeruginosa NIES-843	MAE_18410	-190	4.1	TGTTACAGACAATACA
Trichodesmium erythraeum IMS101	Tery_1068	-276	3.8	TGTATTTTTATATAGT
		-199	4.1	TGTTATATAAGCTACG
Synechococcus elongatus PCC 7942	Synpcc7942_1240	-220	4.9	TGTAGCAATTGCTACT
		-149	4.3	AGTATCAATGATTACT
		-80	4.4	TGTAGTTTCTGTTACC
Synechococcus sp. JA-3-3Ab	CYA_0612	-72	3.9	TGTAACTGCCAATACC
Gloeobacter violaceus PCC 7421	gvip212	-146	4	TGTATCTGGGGTTACG
Thermosynechococcus elongatus BP-1	tlr1349	-82	4.6	AGTAGCAAAATTTACA

Position: -7 Score: 4.8 Sequence: TGTAACAATGAATACA Locus tag: L8106_16614
	L8106_16614	-7	4.8	TGTAACAATGAATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2101
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_A2101	67	5	TGTATCATtaaATACA
Cyanothece sp. PCC 7425	Cyan7425_0732	-33	5.2	TGTATCATAAGCTACA
Cyanothece sp. PCC 7425	Cyan7425_0732	-33	5.2	TGTATCATAAGCTACA
Microcystis aeruginosa NIES-843	MAE_14840	-38	4.9	TGTAAATTTAGATACA
Microcystis aeruginosa NIES-843	MAE_14840	-38	4.9	TGTAAATTTAGATACA

Position: -107 Score: 4.1 Sequence: TGTATTCACTTATACT Locus tag: L8106_10907
	L8106_10907	-107	4.1	TGTATTCACTTATACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0076
Ortholog function: hypothetical protein
Cyanothece sp. PCC 7425	Cyan7425_0729	-128	4.3	TGTAACATTTGTTATT
		-71	4.1	AGTATTGGTGGATACA
Nostoc sp. PCC 7120	asr0064	-107	3.7	CGTATAGCAAAATACA
Trichodesmium erythraeum IMS101	Tery_2891	-191	4.1	TGTAATTTAGACAACA
		-110	4.6	TGTAACTATATATACT
Thermosynechococcus elongatus BP-1	tsr2448	-63	4.1	AGTATTGGATATTACA

Position: -109 Score: 4.5 Sequence: TGTAATGCTTGATACA Locus tag: L8106_18726
	L8106_18726	-109	4.5	TGTAATGCTTGATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: glutamine synthetase, type I
Synechococcus sp. PCC 7002	SYNPCC7002_A1630	-125	3.5	TGTgACccAgacTACA
Synechocystis sp. PCC 6803	slr1756	-98	4.3	GGTAGCGAAAAATACA
Cyanothece sp. ATCC 51142	cce_4432	-89	4.5	AGTATCCAATTATACA
		-30	4	TGTATATATTGAAACC
Cyanothece sp. PCC 8801	PCC8801_0808	-92	4	CGTATCATGGTATACA
Cyanothece sp. PCC 7425	Cyan7425_1839	-221	4.9	TGTAACTCATGATACA
Microcystis aeruginosa NIES-843	MAE_19270	-92	4.7	TGTATCgaAaaATACA
Nostoc sp. PCC 7120	alr2328	-142	4.8	TGTAACAAAGACTACA
Trichodesmium erythraeum IMS101	Tery_3834	-250	4	CGTAACACCCGATACA
Synechococcus elongatus PCC 7942	Synpcc7942_2156	-194	4.8	TGTATCAgcTGTTACA
Prochlorococcus marinus str. MIT 9313	PMT0601	-79	4.2	GGTACCTGTTGCTACA
Synechococcus sp. JA-3-3Ab	CYA_1363	-138	4.3	CGTATCAGAAACTACA
Gloeobacter violaceus PCC 7421	gvip146	-116	4	CGTATCTCAGACTACA

Position: -72 Score: 4.5 Sequence: TGTATCAAGCATTACA Locus tag: L8106_18731
	L8106_18731	-72	4.5	TGTATCAAGCATTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: phycobilisome core component
Cyanothece sp. ATCC 51142	cce_1944	-177	3.8	TGTGATAAGAAATACA
Cyanothece sp. PCC 8801	PCC8801_0807	-251	4	TGTATACCATGATACG
Cyanothece sp. PCC 7425	Cyan7425_1838	-281	4.9	TGTATCATGAGTTACA
Nostoc sp. PCC 7120	all2327	-233	4.8	TGTAGTCTTTGTTACA
Synechococcus elongatus PCC 7942	Synpcc7942_2158	-214	4.8	TGTAACAGCTGATACA

Position: -91 Score: 5 Sequence: TGTATCATATGTTACT Locus tag: L8106_23605
	L8106_23605	-91	5	TGTATCATATGTTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnB
Ortholog function: nitrogen regulatory protein P-II
Synechocystis sp. PCC 6803	ssl0707	-184	3.7	GGTACTGATTTTTACA
Nostoc sp. PCC 7120	all2319	-214	3.8	AGTTACACAGACTACA
Synechococcus elongatus PCC 7942	Synpcc7942_0321	-103	4.8	TGTAGCAGTAACTACA
Synechococcus sp. JA-3-3Ab	CYA_1508	-74	4.5	TGTATCCGTTTTTACA
Thermosynechococcus elongatus BP-1	tll0591	-80	5.1	TGTAGCTATTGCTACA

Position: -78 Score: 4.4 Sequence: GGTAGCATCGGTTACA Locus tag: L8106_08501
	L8106_08501	-78	4.4	GGTAGCATCGGTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrrA
Ortholog function: Transcriptional regulator, OmpR family
Synechococcus sp. PCC 7002	SYNPCC7002_A0496	-75	4.1	CGTAACCACGGTTACA
Synechocystis sp. PCC 6803	sll1330	-75	4.6	GGTAACTGTTGTTACA
Cyanothece sp. ATCC 51142	cce_1808	-76	4.3	CGTAGCCGATGTTACA
Cyanothece sp. PCC 8801	PCC8801_3375	-76	4.5	CGTAGCAGATGTTACA
Cyanothece sp. PCC 7425	Cyan7425_0851	-82	4.1	AGTAGCTAGAGTTACG
Nostoc sp. PCC 7120	all4312	-75	4.5	AGTAACAAAGACTACA
Trichodesmium erythraeum IMS101	Tery_0675	-89	4.7	AGTAGCTTCTGTTACA
Thermosynechococcus elongatus BP-1	tlr1330	-138	4	AGTATTATTCGTTACG

Position: -201 Score: 3.4 Sequence: TGAATTTTGTATAACA Position: -194 Score: 3.5 Sequence: TGTATAACAAGATTCG Locus tag: L8106_03479
	L8106_03479	-201	3.4	TGAATTTTGTATAACA
		-194	3.5	TGTATAACAAGATTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: icd
Ortholog function: Isocitrate dehydrogenase (NADP+)
Microcystis aeruginosa NIES-843	MAE_62530	-30	3.7	CGTATAGATAAATACT
Nostoc sp. PCC 7120	alr1827	-6	3.4	TGAAATATGTACAACA

Position: -187 Score: 3.8 Sequence: AGTATTCTCAATTACC Position: -64 Score: 3.6 Sequence: CGTATCTCTTACTATA Locus tag: L8106_29295
	L8106_29295	-187	3.8	AGTATTCTCAATTACC
		-64	3.6	CGTATCTCTTACTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Ferric uptake regulator, Fur family
Cyanothece sp. PCC 8801	PCC8801_0870	-380	3.4	TGTTTATGCTAAAACA
Microcystis aeruginosa NIES-843	MAE_37080	-118	3.7	AGTAATTTTTCATACT
Trichodesmium erythraeum IMS101	Tery_1958	-40	3.5	TGTATCATTGTCAATA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NtcA regulog to Lyngbya sp. PCC 8106

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --