Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Prochlorococcus marinus str. MIT 9303

Reference regulog properties
Source regulog: Crp - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9303
Orthologous TF(s) null
Regulated genes 4
Built upon 106 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9303
Locus tag Position Score Sequence
Position: -71
Score: 3.6
Sequence: CCTGATCTAACGCAAC
Locus tag: null
null -71 3.6 CCTGATCTAACGCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis regulator, DeoR family
Cyanothece sp. ATCC 51142 cce_0683 -95 3.9 TGTTGTCAAAGTCACA
Cyanothece sp. PCC 8801 PCC8801_0414 -41 3.8 GTTGATTTAAGTCCTA
Microcystis aeruginosa NIES-843 MAE_23100 -128 3.7 TGTTGTCAAAGTCACG
Nostoc sp. PCC 7120 all2491 -42 3.7 TGTTGTCAAAGTCAAA
Prochlorococcus marinus str. MIT 9313 PMT1607 -71 3.9 CCTGATCTAAGGCAAC
Position: 17
Score: 3.7
Sequence: TTTGAAACAATTCACC
Locus tag: null
null 17 3.7 TTTGAAACAATTCACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0687
Ortholog function: Conserved hypothetical protein
Synechocystis sp. PCC 6803 slr0013 -56 4.1 TTTGATCAAAGTCCTA
Cyanothece sp. ATCC 51142 cce_3288 -137 3.8 TTTGACTTAAATAACC
Cyanothece sp. PCC 8801 PCC8801_0091 -153 3.8 TTTGATCTCGATCATT
Prochlorococcus marinus str. MIT 9313 PMT0719 17 3.7 TTTGAAACAATTCACC