Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LexA regulog to Prochlorococcus marinus str. MIT 9303

Reference regulog properties
Source regulog: LexA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9303
Orthologous TF(s) null
Regulated genes 4
Built upon 26 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9303
Locus tag Position Score Sequence
Position: -52
Score: 4.4
Sequence: AGTGCGTCTGTACT
Locus tag: null
null -52 4.4 AGTGCGTCTGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: umuC
Ortholog function: DNA polymerase V, subunit C
Prochlorococcus marinus str. MIT 9313 PMT0638 -52 4.5 AGTATCTTTGTACT
Synechococcus sp. WH 8102 SYNW1043 -39 4.6 AATACATCAGTACT
Position: -37
Score: 4.5
Sequence: GGAACAGGTGTACT
Locus tag: null
null -37 4.5 GGAACAGGTGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: umuD
Ortholog function: DNA polymerase V, subunit D
Prochlorococcus marinus str. MIT 9313 PMT0635 -20 4.4 GGAACGGGTGTACT
Synechococcus sp. WH 8102 SYNW1044 -39 4.6 AATACATCAGTACT
Position: -55
Score: 4.6
Sequence: GGTACACATGTATT
Locus tag: null
null -55 4.6 GGTACACATGTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88)
Cyanothece sp. ATCC 51142 cce_1899 -32 4.7 AGTACCCATGTTCT
Cyanothece sp. PCC 8801 PCC8801_2186 -75 4.3 AGTACTTATGTTCG
Cyanothece sp. PCC 7425 Cyan7425_1233 -131 4.5 GATACAAGTGTTCT
Nostoc sp. PCC 7120 alr4908 -47 4.8 AGTACTAATGTTCT
Prochlorococcus marinus str. MIT 9313 PMT0380 -28 4.6 GGTACACATGTATT
Position: -145
Score: 4.9
Sequence: GGTACGTCTGTACT
Locus tag: null
null -145 4.9 GGTACGTCTGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Synechococcus sp. PCC 7002 SYNPCC7002_A0426 -64 4.3 AGTACGATTGAACT
Cyanothece sp. ATCC 51142 cce_4639 -47 4.8 AATACTTTTGTACT
Cyanothece sp. PCC 7425 Cyan7425_1671 -39 4.5 AGTACGGATATACT
Microcystis aeruginosa NIES-843 MAE_16070 -40 4.6 CATACTGCTGTACT
Nostoc sp. PCC 7120 all3272 -66 4.6 AGTATATCTGTTCT
Prochlorococcus marinus str. MIT 9313 PMT1727 -145 4.9 GGTACGTCTGTACT
Synechococcus sp. WH 8102 SYNW2062 -78 4.7 CGTACGCCTGTACT
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