Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Prochlorococcus marinus str. NATL2A

Reference regulog properties
Source regulog: LexA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. NATL2A
Orthologous TF(s) PMN2A_0828
Regulated genes 3
Built upon 26 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. NATL2A
Locus tag Position Score Sequence
Position: -40
Score: 4.4
Sequence: AGTTCAAGTGTACT
Locus tag: PMN2A_0275
PMN2A_0275 -40 4.4 AGTTCAAGTGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: umuD
Ortholog function: DNA polymerase V, subunit D
Prochlorococcus marinus str. MIT 9313 PMT0635 -20 4.4 GGAACGGGTGTACT
Synechococcus sp. WH 8102 SYNW1044 -39 4.6 AATACATCAGTACT
Position: -42
Score: 4.7
Sequence: GGTACATATGTATT
Position: -26
Score: 4.2
Sequence: AGGACGAATGTACT
Locus tag: PMN2A_0828
PMN2A_0828 -42 4.7 GGTACATATGTATT
-26 4.2 AGGACGAATGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88)
Cyanothece sp. ATCC 51142 cce_1899 -32 4.7 AGTACCCATGTTCT
Cyanothece sp. PCC 8801 PCC8801_2186 -75 4.3 AGTACTTATGTTCG
Cyanothece sp. PCC 7425 Cyan7425_1233 -131 4.5 GATACAAGTGTTCT
Nostoc sp. PCC 7120 alr4908 -47 4.8 AGTACTAATGTTCT
Prochlorococcus marinus str. MIT 9313 PMT0380 -28 4.6 GGTACACATGTATT
Position: -104
Score: 4.8
Sequence: CGTACGTCTGTACT
Locus tag: PMN2A_1133
PMN2A_1133 -104 4.8 CGTACGTCTGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Synechococcus sp. PCC 7002 SYNPCC7002_A0426 -64 4.3 AGTACGATTGAACT
Cyanothece sp. ATCC 51142 cce_4639 -47 4.8 AATACTTTTGTACT
Cyanothece sp. PCC 7425 Cyan7425_1671 -39 4.5 AGTACGGATATACT
Microcystis aeruginosa NIES-843 MAE_16070 -40 4.6 CATACTGCTGTACT
Nostoc sp. PCC 7120 all3272 -66 4.6 AGTATATCTGTTCT
Prochlorococcus marinus str. MIT 9313 PMT1727 -145 4.9 GGTACGTCTGTACT
Synechococcus sp. WH 8102 SYNW2062 -78 4.7 CGTACGCCTGTACT