Propagation of NtcA regulog to Prochlorococcus marinus str. NATL2A

Reference regulog properties
Source regulog:	NtcA - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	2-oxoglutarate
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Prochlorococcus marinus str. NATL2A
Orthologous TF(s)	PMN2A_1612
Regulated genes	8

Built upon 228 sites [see more]

Predicted regulatory interactions in *Prochlorococcus marinus str. NATL2A*
	Locus tag	Position	Score	Sequence
Position: -165 Score: 4.3 Sequence: AGTAGTTTTAAATACT Locus tag: PMN2A_1612
	PMN2A_1612	-165	4.3	AGTAGTTTTAAATACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ntcA
Ortholog function: Global nitrogen transcription regulator, Crp family
Synechococcus sp. PCC 7002	SYNPCC7002_A1675	-177	3.9	TGAAGCAAAAAGTACA
Cyanothece sp. PCC 7425	Cyan7425_0755	-173	4.8	TGTATCCGATGATACA
Nostoc sp. PCC 7120	alr4392	-151	3.7	GGTATCATTATGAACA
		-111	3.7	AGTATAGGAAAGTACA
Synechococcus elongatus PCC 7942	Synpcc7942_0127	-157	4.7	AGTAGCAGTTGCTACA
Synechococcus sp. JA-3-3Ab	CYA_1799	-181	4.7	TGTAGCTCCTGCTACA
Gloeobacter violaceus PCC 7421	gvip454	-77	3.9	AGTAGTCCCTAATACA

Position: -172 Score: 3.4 Sequence: TGTAAATTCAATTAAT Position: -104 Score: 4.2 Sequence: TGTATCAACACTTACA Locus tag: PMN2A_1629
	PMN2A_1629	-172	3.4	TGTAAATTCAATTAAT
		-104	4.2	TGTATCAACACTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: amt1
Ortholog function: ammonium transporter
Synechococcus sp. PCC 7002	SYNPCC7002_A2208	-52	3.7	GGTTACTTCTGCTACC
Synechocystis sp. PCC 6803	sll0108	-189	4	AGTAGTAAATCATACA
		-18	4.4	TGTAGATTAAAGTACA
Cyanothece sp. ATCC 51142	cce_3261	-152	3.5	TGTtAaggtTGTaACA
Cyanothece sp. PCC 8801	PCC8801_1229	-264	5	TGTATTTTTTGATACA
		-229	4.1	AGTAATAAAAAAAACA
Microcystis aeruginosa NIES-843	MAE_40010	-213	4.6	TGTATCAACGAATACA
Trichodesmium erythraeum IMS101	Tery_4477	-83	4.9	AGTAGCATTTGATACA
Synechococcus elongatus PCC 7942	Synpcc7942_0442	-151	4.1	TGTTACATCGATTACA
Prochlorococcus marinus str. MIT 9313	PMT1853	-160	3.8	TGTAACAAAATGAACT
Synechococcus sp. WH 8102	SYNW0253	-100	4.2	TGTATCAATTAACACA
Thermosynechococcus elongatus BP-1	amt1	-190	4.4	TGTATAACGTGATACA

Position: -119 Score: 4.2 Sequence: TGTATCTTCGTTTACT Locus tag: PMN2A_1048
	PMN2A_1048	-119	4.2	TGTATCTTCGTTTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: urtA
Ortholog function: Urea ABC transporter, substrate-binding protein
Prochlorococcus marinus str. MIT 9313	PMT2229	-146	4	TGTTGCAACAGCTACC
		-95	4.7	TGTATCATTCACTACA
Synechococcus sp. WH 8102	SYNW2442	-118	4	TGTTGCAACAGCTACC

Position: -257 Score: 3.6 Sequence: TGTTTAAGATGTAACT Position: -248 Score: 3.6 Sequence: TGTAACTCTAAAGACT Position: -177 Score: 3.5 Sequence: AGTAAGTTAAAAAACA Locus tag: PMN2A_1078
	PMN2A_1078	-257	3.6	TGTTTAAGATGTAACT
		-248	3.6	TGTAACTCTAAAGACT
		-177	3.5	AGTAAGTTAAAAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltS
Ortholog function: Glutamate synthase (NADPH dependent) large chain (EC 1.4.1.13)
Nostoc sp. PCC 7120	alr4344	-265	3.5	TGGAAAAATTAAAACA
Trichodesmium erythraeum IMS101	Tery_0466	-228	4.2	TGTATCCTAGGCAACA

Position: -101 Score: 4.3 Sequence: TGTATTGAATGATACC Position: -67 Score: 4.4 Sequence: GGTAAAAACTGATACA Locus tag: PMN2A_1298
	PMN2A_1298	-101	4.3	TGTATTGAATGATACC
		-67	4.4	GGTAAAAACTGATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirA
Ortholog function: Nitrite reductase, ferredoxin dependent
Synechococcus sp. PCC 7002	SYNPCC7002_A1827	-111	4	CGTAGTTAACACTACA
Synechocystis sp. PCC 6803	slr0898	-74	4.7	TGTAATTTACGTTACA
Cyanothece sp. ATCC 51142	cce_1223	-76	4.7	TGTTACATTAGCTACA
Cyanothece sp. PCC 8801	PCC8801_2468	-75	4.6	TGTTACAATTAATACA
Cyanothece sp. PCC 7425	Cyan7425_4573	-123	4.5	TGTAACTTAATATACC
Microcystis aeruginosa NIES-843	MAE_18410	-190	4.1	TGTTACAGACAATACA
Trichodesmium erythraeum IMS101	Tery_1068	-276	3.8	TGTATTTTTATATAGT
		-199	4.1	TGTTATATAAGCTACG
Synechococcus elongatus PCC 7942	Synpcc7942_1240	-220	4.9	TGTAGCAATTGCTACT
		-149	4.3	AGTATCAATGATTACT
		-80	4.4	TGTAGTTTCTGTTACC
Synechococcus sp. JA-3-3Ab	CYA_0612	-72	3.9	TGTAACTGCCAATACC
Gloeobacter violaceus PCC 7421	gvip212	-146	4	TGTATCTGGGGTTACG
Thermosynechococcus elongatus BP-1	tlr1349	-82	4.6	AGTAGCAAAATTTACA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NtcA regulog to Prochlorococcus marinus str. NATL2A

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --