Propagation of NtcB regulog to Cyanothece sp. ATCC 51142

Built upon 44 sites [see more]

Predicted regulatory interactions in *Cyanothece sp. ATCC 51142*
	Locus tag	Position	Score	Sequence
Position: -69 Score: 4.4 Sequence: ATGCGTTTTTTGTAT Locus tag: cce_1062
	cce_1062	-69	4.4	ATGCGTTTTTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrdC
Ortholog function: putative YrdC-like RNA-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_A1732	-51	4.8	ATGCAGCAATTGCAT
Cyanothece sp. ATCC 51142	cce_1062	-69	4.4	ATGCGTTTTTTGTAT

Position: -127 Score: 4.7 Sequence: ATGCAAAAAATCCAT Position: -105 Score: 4.1 Sequence: ATGCAAAAAACGGAT Locus tag: cce_1223
	cce_1223	-127	4.7	ATGCAAAAAATCCAT
		-105	4.1	ATGCAAAAAACGGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirA
Ortholog function: ferredoxin--nitrite reductase
Synechococcus sp. PCC 7002	SYNPCC7002_A1827	-162	4	ATGCGGCGATCGCAT
Synechocystis sp. PCC 6803	slr0898	-103	4.8	ATGCGTAAACTGCAT
Cyanothece sp. ATCC 51142	cce_1223	-127	4.7	ATGCAAAAAATCCAT
		-105	4.1	ATGCAAAAAACGGAT
Cyanothece sp. PCC 8801	PCC8801_2468	-126	3.9	ATGCAAAATAATCAT
Cyanothece sp. PCC 7425	Cyan7425_4573	-174	4.5	ATGCAGGTTTGGCAT
Microcystis aeruginosa NIES-843	MAE_18410	-241	4.6	ATGCACTTACTGCAT
Nostoc sp. PCC 7120	alr0607	-562	4.8	ATGCAGAAAACGCAT
Trichodesmium erythraeum IMS101	Tery_1068	-250	4.7	ATGTAATAAATGCAT
Synechococcus elongatus PCC 7942	Synpcc7942_1240	-109	4.3	TTGCAGAACATGCAT
Synechococcus sp. JA-3-3Ab	CYA_0612	-101	4.4	ATGACAAAACTGCAT
Thermosynechococcus elongatus BP-1	tlr1349	-111	4.4	ATACAAAAACTGTAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --