Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SufR regulog to Cyanothece sp. ATCC 51142

Reference regulog properties
Source regulog: SufR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. ATCC 51142
Orthologous TF(s) cce_0683
Regulated genes 3
Built upon 48 sites [see more]
Predicted regulatory interactions in Cyanothece sp. ATCC 51142
Locus tag Position Score Sequence
Position: -149
Score: 5.7
Sequence: TAAAACAACATTTATGTTTCTTTA
Position: -109
Score: 5.7
Sequence: ATTAACAACTCAATTGTTGTCAAA
Locus tag: cce_0683
cce_0683 -149 5.7 TAAAACAACATTTATGTTTCTTTA
-109 5.7 ATTAACAACTCAATTGTTGTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis regulator SufR in Cyanobacteria
Synechococcus sp. PCC 7002 SYNPCC7002_A1815 -80 5.5 TTTAACAACTGTTTGGTTGTTTTA
-39 5.8 TTTAACAACAAAAAAGTTGTCAAA
Synechocystis sp. PCC 6803 sll0088 -163 5.6 TAAAACAACAGGTAAGTTGTTTTA
-123 5.6 ATTAGCAACCCGATTGTTGTCAAA
Cyanothece sp. ATCC 51142 cce_0683 -149 5.7 TAAAACAACATTTATGTTTCTTTA
-109 5.7 ATTAACAACTCAATTGTTGTCAAA
Cyanothece sp. PCC 8801 PCC8801_0414 -200 5.7 TTAAACAACATTTTTGTTGCTCAA
-160 5.6 AATAACAACCCCATTGTTGTCAAA
Cyanothece sp. PCC 7425 Cyan7425_3451 -113 5.5 TTAAACAACTCAGGCGTTGCTTAA
-74 5.8 TTTAGCAACACATCAGTTGTCTAA
Microcystis aeruginosa NIES-843 MAE_23100 -182 5.9 TTAAACAACAATAAAGTTGTTTAA
-142 5.7 ATTAACAACAAAGCTGTTGTCAAA
Nostoc sp. PCC 7120 all2491 -101 5.9 TAAAACAACATCGATGTTGTTTAA
-56 5.7 ATTAACAACAACAATGTTGTCAAA
Trichodesmium erythraeum IMS101 Tery_4354 -212 6 TTAAACAACTTATTTGTTGTTTAA
Synechococcus elongatus PCC 7942 Synpcc7942_1733 -136 5.7 TTGAACAACACAGACGTTGCTTAA
-98 5.7 TTGAACAACATCAATGTTGTCAAA
Prochlorococcus marinus str. MIT 9313 PMT1607 -204 5 AAACGAAACCTATTGGTTTCGTTT
Synechococcus sp. JA-3-3Ab CYA_2189 -119 6 TAAAACAACACGGTTGTTGCTTAA
Synechococcus sp. WH 8102 SYNW0317 -68 4.9 TTACGAAACGACCTGGTTTCCTTA
Thermosynechococcus elongatus BP-1 tlr0491 -78 5.7 TTAAGCAACGAGATGGTTGCTTTA
-40 5.9 TTTAGCAACAAAACGGTTGTTTTA
Position: -133
Score: 5.6
Sequence: AAAAACAACCCTAATGTTGTGTTA
Locus tag: cce_0953
cce_0953 -133 5.6 AAAAACAACCCTAATGTTGTGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate oxidoreductase
Synechococcus sp. PCC 7002 SYNPCC7002_A1443 -152 5.1 TTTAGCAAGCATTTTGTTGTTAAA
Synechocystis sp. PCC 6803 sll0741 -172 4.9 AAAAACAATCTTGACGTTGTTTAA
Cyanothece sp. ATCC 51142 cce_0953 -133 5.6 AAAAACAACCCTAATGTTGTGTTA
Cyanothece sp. PCC 8801 PCC8801_3918 -134 5.5 AAAAACAACCATGAAGTTGTCTTA
Position: -137
Score: 5.8
Sequence: TTTAACAACATTTTTGTTGCTAAA
Locus tag: cce_1005
cce_1005 -137 5.8 TTTAACAACATTTTTGTTGCTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufD
Ortholog function: Iron-sulfur assembly protein
Synechococcus sp. PCC 7002 SYNPCC7002_A1812 -145 5.2 TTTGACAACTTTTTTGTTGTTAAA
-104 5.6 TAAAACAACCAAACAGTTGTTAAA
Synechocystis sp. PCC 6803 slr0076 -116 5.3 TAAAACAACTTACCTGTTGTTTTA
Cyanothece sp. ATCC 51142 cce_1005 -137 5.8 TTTAACAACATTTTTGTTGCTAAA
Cyanothece sp. PCC 8801 PCC8801_0417 -188 4.8 TTTGACAACAATGGGGTTGTTATT
-148 5.9 TTGAGCAACAAAAATGTTGTTTAA
Cyanothece sp. PCC 7425 Cyan7425_3443 -106 5 TTAGACAACTGATGTGTTGCTAAA
-67 5.3 TTAAGCAACGCCTGAGTTGTTTAA
Microcystis aeruginosa NIES-843 MAE_23070 -105 5.1 TTTGACAACAGCTTTGTTGTTAAT
-65 5.9 TTAAACAACTTTATTGTTGTTTAA
Nostoc sp. PCC 7120 alr2494 -193 5.2 TTTGACAACATTGTTGTTGTTAAT
-148 6 TTAAACAACATCGATGTTGTTTTA
Trichodesmium erythraeum IMS101 Tery_4357 -62 6 TTAAACAACAAATAAGTTGTTTAA
Synechococcus elongatus PCC 7942 Synpcc7942_1737 -101 5.1 TTTGACAACATTGATGTTGTTCAA
-63 5.1 TTAAGCAACGTCTGTGTTGTTCAA
Prochlorococcus marinus str. MIT 9313 PMT1604 -194 5 AAACGAAACCAATAGGTTTCGTTT
Synechococcus sp. WH 8102 SYNW0321 -39 4.9 TAAGGAAACCAGGTCGTTTCGTAA
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