Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PirR regulog to Cyanothece sp. ATCC 51142

Reference regulog properties
Source regulog: PirR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor
Biological process: Salt stress response
Effector:
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. ATCC 51142
Orthologous TF(s) cce_3753
Regulated genes 1
Built upon 11 sites [see more]
Predicted regulatory interactions in Cyanothece sp. ATCC 51142
Locus tag Position Score Sequence
Position: -22
Score: 5.3
Sequence: TTGTCAATCATTTAGATACAA
Position: 19
Score: 5.3
Sequence: TTGTCTTTTATTTAAAAACAA
Locus tag: cce_2769
cce_2769 -22 5.3 TTGTCAATCATTTAGATACAA
19 5.3 TTGTCTTTTATTTAAAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pirA
Ortholog function: Pirin-like protein
Cyanothece sp. ATCC 51142 cce_2769 -51 5.1 TTGTGTCTTTTTTAGATACTT
-22 5.3 TTGTCAATCATTTAGATACAA
19 5.3 TTGTCTTTTATTTAAAAACAA
Synechococcus sp. PCC 7002 SYNPCC7002_A2717 -115 5.3 TTGTTTCTTTTTGAGATACAT
-74 5.1 TTGTCTTTTATTTGGCGGCAA
Synechocystis sp. PCC 6803 sll1773 -118 5.3 TTGTCCCTATTTTGGATGCAA
-77 5 TTGTCTTTATTGGGGATGCAA
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