Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SufR regulog to Synechococcus sp. CC9311

Reference regulog properties
Source regulog: SufR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus sp. CC9311
Orthologous TF(s) sync_2485
Regulated genes 2
Built upon 48 sites [see more]
Predicted regulatory interactions in Synechococcus sp. CC9311
Locus tag Position Score Sequence
Position: -43
Score: 5
Sequence: AAACGAAACCTCTATGTTTCGTAT
Locus tag: sync_2484
sync_2484 -43 5 AAACGAAACCTCTATGTTTCGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftrC
Ortholog function: Ferredoxin thioredoxin reductase catalytic chain
Synechococcus elongatus PCC 7942 Synpcc7942_1734 -101 5.1 TTTGACAACATTGATGTTGTTCAA
-63 5.1 TTAAGCAACGTCTGTGTTGTTCAA
Synechococcus sp. WH 8102 SYNW0318 -39 4.9 TAAGGAAACCAGGTCGTTTCGTAA
Position: -195
Score: 5.2
Sequence: ATACGAAACATAGAGGTTTCGTTT
Locus tag: sync_2485
sync_2485 -195 5.2 ATACGAAACATAGAGGTTTCGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis regulator SufR in Cyanobacteria
Synechococcus sp. PCC 7002 SYNPCC7002_A1815 -80 5.5 TTTAACAACTGTTTGGTTGTTTTA
-39 5.8 TTTAACAACAAAAAAGTTGTCAAA
Synechocystis sp. PCC 6803 sll0088 -163 5.6 TAAAACAACAGGTAAGTTGTTTTA
-123 5.6 ATTAGCAACCCGATTGTTGTCAAA
Cyanothece sp. ATCC 51142 cce_0683 -149 5.7 TAAAACAACATTTATGTTTCTTTA
-109 5.7 ATTAACAACTCAATTGTTGTCAAA
Cyanothece sp. PCC 8801 PCC8801_0414 -200 5.7 TTAAACAACATTTTTGTTGCTCAA
-160 5.6 AATAACAACCCCATTGTTGTCAAA
Cyanothece sp. PCC 7425 Cyan7425_3451 -113 5.5 TTAAACAACTCAGGCGTTGCTTAA
-74 5.8 TTTAGCAACACATCAGTTGTCTAA
Microcystis aeruginosa NIES-843 MAE_23100 -182 5.9 TTAAACAACAATAAAGTTGTTTAA
-142 5.7 ATTAACAACAAAGCTGTTGTCAAA
Nostoc sp. PCC 7120 all2491 -101 5.9 TAAAACAACATCGATGTTGTTTAA
-56 5.7 ATTAACAACAACAATGTTGTCAAA
Trichodesmium erythraeum IMS101 Tery_4354 -212 6 TTAAACAACTTATTTGTTGTTTAA
Synechococcus elongatus PCC 7942 Synpcc7942_1733 -136 5.7 TTGAACAACACAGACGTTGCTTAA
-98 5.7 TTGAACAACATCAATGTTGTCAAA
Prochlorococcus marinus str. MIT 9313 PMT1607 -204 5 AAACGAAACCTATTGGTTTCGTTT
Synechococcus sp. JA-3-3Ab CYA_2189 -119 6 TAAAACAACACGGTTGTTGCTTAA
Synechococcus sp. WH 8102 SYNW0317 -68 4.9 TTACGAAACGACCTGGTTTCCTTA
Thermosynechococcus elongatus BP-1 tlr0491 -78 5.7 TTAAGCAACGAGATGGTTGCTTTA
-40 5.9 TTTAGCAACAAAACGGTTGTTTTA
© 2009-2020 RegPrecise