Propagation of Fur regulog to Prochlorococcus marinus str. NATL1A
| Source regulog: | Fur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Prochlorococcus marinus str. NATL1A |
| Orthologous TF(s) | null |
| Regulated genes | 8 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -174
Score: 3.9 Sequence: TTTGAAAATTATTTTTCGT
Position: -152
Score: 3.3 Sequence: TTTTCAAATCAATGTAATT
Position: -142
Score: 3.2 Sequence: AATGTAATTGAAAAACTTT
Position: -136
Score: 4 Sequence: ATTGAAAAACTTTTTAAAC
Position: -125
Score: 3.4 Sequence: TTTTAAACTTATAATTTTT
Position: -32
Score: 3.2 Sequence: AGTAAAATTTGTTCTGAGT
Position: -1
Score: 3 Sequence: TATGGAAACCACTAGTTTT
Locus tag: null
|
||||
| null | -174 | 3.9 | TTTGAAAATTATTTTTCGT | |
| -152 | 3.3 | TTTTCAAATCAATGTAATT | ||
| -142 | 3.2 | AATGTAATTGAAAAACTTT | ||
| -136 | 4 | ATTGAAAAACTTTTTAAAC | ||
| -125 | 3.4 | TTTTAAACTTATAATTTTT | ||
| -32 | 3.2 | AGTAAAATTTGTTCTGAGT | ||
| -1 | 3 | TATGGAAACCACTAGTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbM | ||||
| Ortholog function: Photosystem II reaction center M protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0893 | -29 | 3 | TTTCTTATAATTTCTTAAC |
| Cyanothece sp. PCC 8801 | PCC8801_2861 | -49 | 3.8 | ATTGTAAAAAAATATTAAC |
| Nostoc sp. PCC 7120 | asl0883 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0642 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -1
Score: 3.3 Sequence: CATGACTATTTCACTCAAA
Locus tag: null
|
||||
| null | -1 | 3.3 | CATGACTATTTCACTCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxA | ||||
| Ortholog function: Cytochrome c oxidase, subunit I | ||||
| Cyanothece sp. ATCC 51142 | cce_1976 | -136 | 3.7 | AATTTCAATCAATTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0568 | -152 | 2.7 | TTTGTTTATTATTTGTTAC |
| Microcystis aeruginosa NIES-843 | MAE_22940 | -216 | 2.5 | TTTTAGATATTCTTTAGAT |
| Nostoc sp. PCC 7120 | alr0951 | -134 | 3.7 | TTTACTCAAGATTATTAAT |
|
Position: -156
Score: 3.6 Sequence: ATGGGCAAAAGTAATTAAT
Position: -116
Score: 2.9 Sequence: AAGATGAATAATTTTTTTT
Position: -113
Score: 3.3 Sequence: ATGAATAATTTTTTTTAAA
Position: -103
Score: 3.1 Sequence: TTTTTTAAAGAGAATCTTT
Position: -101
Score: 3.2 Sequence: TTTTAAAGAGAATCTTTAT
Position: -97
Score: 3.4 Sequence: AAAGAGAATCTTTATGTTC
Position: -20
Score: 2.9 Sequence: CTTGATGGATTTTTGCATA
Locus tag: null
|
||||
| null | -156 | 3.6 | ATGGGCAAAAGTAATTAAT | |
| -116 | 2.9 | AAGATGAATAATTTTTTTT | ||
| -113 | 3.3 | ATGAATAATTTTTTTTAAA | ||
| -103 | 3.1 | TTTTTTAAAGAGAATCTTT | ||
| -101 | 3.2 | TTTTAAAGAGAATCTTTAT | ||
| -97 | 3.4 | AAAGAGAATCTTTATGTTC | ||
| -20 | 2.9 | CTTGATGGATTTTTGCATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaA | ||||
| Ortholog function: Heme A synthase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0256 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22920 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1780 | -278 | 3.5 | ATTGTTAAAATTATGAAAT |
| -167 | 3.3 | ATTAAAAAAAAATTTAAAA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_2601 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1340 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -296
Score: 3.2 Sequence: ACTTAATCTCTTTCGCATT
Position: -154
Score: 3 Sequence: ATGAGTAGAAATACGCATT
Position: -124
Score: 3.1 Sequence: ATATGTATATATATTCATT
Position: -109
Score: 3 Sequence: CATTCGAAGATATATCTTT
Position: -90
Score: 3 Sequence: AATGTTAAATGTATCGAAT
Position: -78
Score: 3.2 Sequence: ATCGAATTCTCTAAACATT
Position: -1
Score: 3 Sequence: AATGACTTCGACAATAACT
Position: 5
Score: 3.4 Sequence: TTCGACAATAACTCGTAAG
Locus tag: null
|
||||
| null | -296 | 3.2 | ACTTAATCTCTTTCGCATT | |
| -154 | 3 | ATGAGTAGAAATACGCATT | ||
| -124 | 3.1 | ATATGTATATATATTCATT | ||
| -109 | 3 | CATTCGAAGATATATCTTT | ||
| -90 | 3 | AATGTTAAATGTATCGAAT | ||
| -78 | 3.2 | ATCGAATTCTCTAAACATT | ||
| -1 | 3 | AATGACTTCGACAATAACT | ||
| 5 | 3.4 | TTCGACAATAACTCGTAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlL | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2347 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Synechocystis sp. PCC 6803 | slr0749 | -173 | 3.3 | ATTTTATTTTTGTCTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0791 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16230 | -150 | 2.8 | ATTTATATAATTTTTAAGC |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -285
Score: 3.5 Sequence: ATTCGATACATTTAACATT
Position: -251
Score: 3.3 Sequence: AATGAATATATATACATAT
Position: -250
Score: 3 Sequence: ATGAATATATATACATATT
Position: -180
Score: 2.9 Sequence: ATTTAATTAGCCTCTAAAT
Position: -95
Score: 2.9 Sequence: AACTAAAAAGTAACTAAAT
Position: -79
Score: 3 Sequence: AATGCGAAAGAGATTAAGT
Position: -28
Score: 3.2 Sequence: TTTGAGTATATACATGTAT
Locus tag: null
|
||||
| null | -285 | 3.5 | ATTCGATACATTTAACATT | |
| -251 | 3.3 | AATGAATATATATACATAT | ||
| -250 | 3 | ATGAATATATATACATATT | ||
| -180 | 2.9 | ATTTAATTAGCCTCTAAAT | ||
| -95 | 2.9 | AACTAAAAAGTAACTAAAT | ||
| -79 | 3 | AATGCGAAAGAGATTAAGT | ||
| -28 | 3.2 | TTTGAGTATATACATGTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlN | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, subunit N | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2345 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Cyanothece sp. ATCC 51142 | cce_4534 | -118 | 3.7 | TTTGAGTTTTATTTAAAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0789 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16250 | -107 | 2.8 | ATTAAGTAATTCTTTATAT |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -146
Score: 3 Sequence: TTTGACAATTAATAAGTAG
Position: -126
Score: 3.3 Sequence: AATAAAAAAAATTGATTTT
Position: -118
Score: 3.2 Sequence: AAATTGATTTTATCTCATT
Locus tag: null
|
||||
| null | -146 | 3 | TTTGACAATTAATAAGTAG | |
| -126 | 3.3 | AATAAAAAAAATTGATTTT | ||
| -118 | 3.2 | AAATTGATTTTATCTCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -271
Score: 3.1 Sequence: ATTAAGAAAAACCATGGAT
Locus tag: null
|
||||
| null | -271 | 3.1 | ATTAAGAAAAACCATGGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psaA | ||||
| Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1 | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1961 | -206 | 3.4 | AGTTTTAAATATTGTTAAT |
| Cyanothece sp. ATCC 51142 | cce_0989 | -205 | 3.4 | AATTTTAATTATTGTTAAG |
| Microcystis aeruginosa NIES-843 | MAE_47560 | -297 | 3.2 | ATTAATAAACTTTTGTAAA |
| Nostoc sp. PCC 7120 | alr5154 | -177 | 3.4 | ATTTTGAATTATTGTTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4669 | -80 | 4 | ATTGATAATTCTTTACAAC |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2049 | -296 | 3.3 | TCTTTGAATTATTGTTAAT |
| Gloeobacter violaceus PCC 7421 | gvip470 | -195 | 2.2 | TTTTTAAAAATTGTTAAGT |