Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Prochlorococcus marinus sp. MIT9215

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus sp. MIT9215
Orthologous TF(s) MIT9215_580
Regulated genes 9
Built upon 167 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus sp. MIT9215
Locus tag Position Score Sequence
Position: -99
Score: 3.6
Sequence: TTTAAGACTGTTAATCAGT
Position: -82
Score: 4.2
Sequence: GTTGATAAAAATTGTTGAT
Position: -35
Score: 2.9
Sequence: TATAGTCTTAATACTTAAT
Position: -29
Score: 3.1
Sequence: CTTAATACTTAATAGAAAT
Position: -22
Score: 3.8
Sequence: CTTAATAGAAATTGTTAAT
Position: -18
Score: 3.5
Sequence: ATAGAAATTGTTAATTAAA
Position: -1
Score: 3.1
Sequence: AATGGAAACGACTAATTTT
Locus tag: MIT9215_958
MIT9215_958 -99 3.6 TTTAAGACTGTTAATCAGT
-82 4.2 GTTGATAAAAATTGTTGAT
-35 2.9 TATAGTCTTAATACTTAAT
-29 3.1 CTTAATACTTAATAGAAAT
-22 3.8 CTTAATAGAAATTGTTAAT
-18 3.5 ATAGAAATTGTTAATTAAA
-1 3.1 AATGGAAACGACTAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142 cce_0893 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2861 -49 3.8 ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120 asl0883 -90 3.5 ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab CYA_0642 -92 2.8 ATTAAAAATATGATTTAAA
Position: 30
Score: 3.5
Sequence: AATAATAAAAGTCTTCAAC
Locus tag: MIT9215_776
MIT9215_776 30 3.5 AATAATAAAAGTCTTCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxA
Ortholog function: Cytochrome c oxidase, subunit I
Cyanothece sp. ATCC 51142 cce_1976 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0568 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22940 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr0951 -134 3.7 TTTACTCAAGATTATTAAT
Position: -256
Score: 3.6
Sequence: TTTGAAATTTGTATTTATA
Position: -244
Score: 3.2
Sequence: ATTTATATTTTTAAGATAT
Position: -239
Score: 3.3
Sequence: TATTTTTAAGATATTCAAT
Position: -223
Score: 3.1
Sequence: AATTTTTAAAATTCTGCAT
Position: -201
Score: 3
Sequence: TTGTTAAAAGAAAATCATT
Position: -195
Score: 3.7
Sequence: AAAGAAAATCATTTAAATT
Position: -189
Score: 2.9
Sequence: AATCATTTAAATTCATATC
Position: -155
Score: 3.1
Sequence: AAATAAAAGGAGTATTATT
Position: -149
Score: 3.3
Sequence: AAGGAGTATTATTAATAAC
Position: -139
Score: 3
Sequence: ATTAATAACTTTTTAGAGT
Position: -105
Score: 3.4
Sequence: AAAGATTAAATCAATTAAT
Position: -102
Score: 3
Sequence: GATTAAATCAATTAATTAT
Position: -101
Score: 3.3
Sequence: ATTAAATCAATTAATTATT
Position: -98
Score: 3.2
Sequence: AAATCAATTAATTATTTTT
Position: -92
Score: 4
Sequence: ATTAATTATTTTTAGAATT
Position: -83
Score: 3.3
Sequence: TTTTAGAATTAAACATATT
Position: -77
Score: 3
Sequence: AATTAAACATATTAATTTT
Position: -76
Score: 3.4
Sequence: ATTAAACATATTAATTTTT
Position: -73
Score: 3.8
Sequence: AAACATATTAATTTTTAAT
Position: -48
Score: 3.1
Sequence: TTGGTTTTTAAATCTAAAT
Position: -41
Score: 3.1
Sequence: TTAAATCTAAATTATCATG
Position: -19
Score: 3.2
Sequence: GATAATAGGTTTTATCCAT
Position: -3
Score: 3.2
Sequence: CATTTGATTAATAACCAAT
Position: 6
Score: 3.1
Sequence: AATAACCAATTATATAAAT
Position: 22
Score: 3.7
Sequence: AATCAAAATATCTGCCAAT
Locus tag: MIT9215_774
MIT9215_774 -256 3.6 TTTGAAATTTGTATTTATA
-244 3.2 ATTTATATTTTTAAGATAT
-239 3.3 TATTTTTAAGATATTCAAT
-223 3.1 AATTTTTAAAATTCTGCAT
-201 3 TTGTTAAAAGAAAATCATT
-195 3.7 AAAGAAAATCATTTAAATT
-189 2.9 AATCATTTAAATTCATATC
-155 3.1 AAATAAAAGGAGTATTATT
-149 3.3 AAGGAGTATTATTAATAAC
-139 3 ATTAATAACTTTTTAGAGT
-105 3.4 AAAGATTAAATCAATTAAT
-102 3 GATTAAATCAATTAATTAT
-101 3.3 ATTAAATCAATTAATTATT
-98 3.2 AAATCAATTAATTATTTTT
-92 4 ATTAATTATTTTTAGAATT
-83 3.3 TTTTAGAATTAAACATATT
-77 3 AATTAAACATATTAATTTT
-76 3.4 ATTAAACATATTAATTTTT
-73 3.8 AAACATATTAATTTTTAAT
-48 3.1 TTGGTTTTTAAATCTAAAT
-41 3.1 TTAAATCTAAATTATCATG
-19 3.2 GATAATAGGTTTTATCCAT
-3 3.2 CATTTGATTAATAACCAAT
6 3.1 AATAACCAATTATATAAAT
22 3.7 AATCAAAATATCTGCCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: -189
Score: 4.2
Sequence: TTTACTAATAAATTTCAAT
Position: -127
Score: 3
Sequence: TAAGAATGTAGTTATCAGA
Position: -90
Score: 3
Sequence: ATACAAATAAATAAATATT
Position: -73
Score: 3
Sequence: TTTGTTTAGAAATATATTT
Position: -70
Score: 3.1
Sequence: GTTTAGAAATATATTTCAT
Position: -69
Score: 3
Sequence: TTTAGAAATATATTTCATG
Position: -1
Score: 4.3
Sequence: AATGACAAGTACTATAAAT
Locus tag: MIT9215_676
MIT9215_676 -189 4.2 TTTACTAATAAATTTCAAT
-127 3 TAAGAATGTAGTTATCAGA
-90 3 ATACAAATAAATAAATATT
-73 3 TTTGTTTAGAAATATATTT
-70 3.1 GTTTAGAAATATATTTCAT
-69 3 TTTAGAAATATATTTCATG
-1 4.3 AATGACAAGTACTATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -154
Score: 2.9
Sequence: ATAGCTTAAAAATAGTTTT
Position: -150
Score: 3.9
Sequence: CTTAAAAATAGTTTTCATA
Position: -147
Score: 2.9
Sequence: AAAAATAGTTTTCATAATT
Position: -141
Score: 3.2
Sequence: AGTTTTCATAATTCACATT
Position: -125
Score: 3.2
Sequence: ATTTAAGTATTTAAACATT
Position: -109
Score: 3
Sequence: ATTCATATAAGTTTTTTAA
Position: -98
Score: 3.4
Sequence: TTTTTTAAATGTGTTCATT
Position: -78
Score: 3
Sequence: TGTAAGAGAACTTATAAAT
Position: -49
Score: 3
Sequence: AATTAAAAAGTTTATGCAA
Position: -1
Score: 3.2
Sequence: AATGAGTAAAGTTGAATTT
Locus tag: MIT9215_674
MIT9215_674 -154 2.9 ATAGCTTAAAAATAGTTTT
-150 3.9 CTTAAAAATAGTTTTCATA
-147 2.9 AAAAATAGTTTTCATAATT
-141 3.2 AGTTTTCATAATTCACATT
-125 3.2 ATTTAAGTATTTAAACATT
-109 3 ATTCATATAAGTTTTTTAA
-98 3.4 TTTTTTAAATGTGTTCATT
-78 3 TGTAAGAGAACTTATAAAT
-49 3 AATTAAAAAGTTTATGCAA
-1 3.2 AATGAGTAAAGTTGAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase, subunit N
Synechococcus sp. PCC 7002 SYNPCC7002_A2345 -126 3.6 TTTTATAAAAACTCTAAGT
Cyanothece sp. ATCC 51142 cce_4534 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0789 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16250 -107 2.8 ATTAAGTAATTCTTTATAT
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -102
Score: 3.4
Sequence: TTTGTAAAAAAATTTTTTT
Position: -101
Score: 3.2
Sequence: TTGTAAAAAAATTTTTTTT
Position: -27
Score: 3.1
Sequence: CTGGATAGAAATACTTAAA
Position: -17
Score: 3.3
Sequence: ATACTTAAATAAAATCAAT
Locus tag: MIT9215_229
MIT9215_229 -102 3.4 TTTGTAAAAAAATTTTTTT
-101 3.2 TTGTAAAAAAATTTTTTTT
-27 3.1 CTGGATAGAAATACTTAAA
-17 3.3 ATACTTAAATAAAATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
Position: -160
Score: 3.2
Sequence: GTTCAGATAATTTAACAAA
Position: -138
Score: 2.9
Sequence: AGGGAGTATTCTTACCTAT
Position: -83
Score: 2.9
Sequence: TTTCAGATATACAAATATT
Position: 28
Score: 3
Sequence: AAAGAGGATGGTTCGATAT
Locus tag: MIT9215_1926
MIT9215_1926 -160 3.2 GTTCAGATAATTTAACAAA
-138 2.9 AGGGAGTATTCTTACCTAT
-83 2.9 TTTCAGATATACAAATATT
28 3 AAAGAGGATGGTTCGATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -316
Score: 3
Sequence: GATGAGATTATATCTTGTA
Position: -235
Score: 3
Sequence: CTGGGTATATATACTCAAA
Position: -115
Score: 3.4
Sequence: TTTGGTAACCAAATTCTTT
Position: -80
Score: 2.9
Sequence: ACCTAAAAAGTTTACTATT
Position: -64
Score: 3.6
Sequence: ATTAATAAATGTAGGCTTT
Locus tag: MIT9215_1497
MIT9215_1497 -316 3 GATGAGATTATATCTTGTA
-235 3 CTGGGTATATATACTCAAA
-115 3.4 TTTGGTAACCAAATTCTTT
-80 2.9 ACCTAAAAAGTTTACTATT
-64 3.6 ATTAATAAATGTAGGCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT