Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SmtB regulog to Synechococcus elongatus PCC 7942

Reference regulog properties
Source regulog: SmtB - Cyanobacteria
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process: Zinc resistance
Effector: Zinc ion, (Zn2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus elongatus PCC 7942
Orthologous TF(s) Synpcc7942_1291
Regulated genes 2
Built upon 16 sites [see more]
Predicted regulatory interactions in Synechococcus elongatus PCC 7942
Locus tag Position Score Sequence
Position: -74
Score: 6.3
Sequence: CATACCTGAATCAAGATTCAGATGTT
Position: -42
Score: 7.1
Sequence: AACACATGAACAGTTATTCAGATATT
Locus tag: Synpcc7942_1290
Synpcc7942_1290 -74 6.3 CATACCTGAATCAAGATTCAGATGTT
-42 7.1 AACACATGAACAGTTATTCAGATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: smtA
Ortholog function: Metallothionein
Cyanothece sp. PCC 8801 PCC8801_0861 -71 6.9 AATATCTGAATACCTGTTCAGATGTT
Synechococcus elongatus PCC 7942 Synpcc7942_1290 -74 6.3 CATACCTGAATCAAGATTCAGATGTT
-42 7.1 AACACATGAACAGTTATTCAGATATT
Synechococcus sp. PCC 7002 SYNPCC7002_A2563 -85 7.2 AATACCTGAATAATTGTTCATGTGTT
-53 6.2 AAAATGTGAACAATCGTTCAACTATT
Thermosynechococcus elongatus BP-1 tsl1016 (deprecated) -79 5.9 GACGTATGAACAGTTGTTCAAGTATA
Position: -84
Score: 7.1
Sequence: AATATCTGAATAACTGTTCATGTGTT
Locus tag: Synpcc7942_1291
Synpcc7942_1291 -84 7.1 AATATCTGAATAACTGTTCATGTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: smtB
Ortholog function: Zinc stress transcriptional regulator, ArsR family
Cyanothece sp. PCC 7425 Cyan7425_4462 -124 7.3 AACATCTGAACAACTGTTCATATGTT
Microcystis aeruginosa NIES-843 MAE_02380 -269 6.7 AATCCATGAACATCTGTTCAGATGTT
Nostoc sp. PCC 7120 all7621 (deprecated) -85 6.4 AACAATTGAACAACTATTCAATTGTA
Synechococcus elongatus PCC 7942 Synpcc7942_1291 -84 7.1 AATATCTGAATAACTGTTCATGTGTT
-52 6.3 AACATCTGAATCTTGATTCAGGTATG
Synechococcus sp. PCC 7002 SYNPCC7002_A2564 -75 6.2 AATAGTTGAACGATTGTTCACATTTT
-43 7.2 AACACATGAACAATTATTCAGGTATT
Synechocystis sp. PCC 6803 sll0792 -97 6.5 AACACCTGAAGATATGCTCAGATATT
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