Propagation of Crp regulog to Synechococcus elongatus PCC 7942
| Source regulog: | Crp - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Synechococcus elongatus PCC 7942 |
| Orthologous TF(s) | Synpcc7942_1243 |
| Regulated genes | 10 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: 5
Score: 3.6 Sequence: GATGTTCCGAATCACC
Locus tag: Synpcc7942_0325
|
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| Synpcc7942_0325 | 5 | 3.6 | GATGTTCCGAATCACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: apcC | ||||
| Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated | ||||
| Cyanothece sp. ATCC 51142 | cce_2911 | 5 | 4.1 | AATGTTTAAAGTCACC |
| Cyanothece sp. PCC 8801 | PCC8801_2788 | 5 | 3.9 | GATGTTTAAAGTCACC |
| Microcystis aeruginosa NIES-843 | MAE_10240 | 5 | 4.1 | GATGTTCAAAATCACC |
| Trichodesmium erythraeum IMS101 | Tery_3647 | 5 | 4.2 | AATGTTTAAGATCACA |
| Synechococcus sp. JA-3-3Ab | CYA_2225 | 5 | 3.7 | CATGTTTAAGATCACG |
| Synechococcus sp. WH 8102 | SYNW0483 | 5 | 3.9 | GTTGTTCAAAGTCACC |
| Thermosynechococcus elongatus BP-1 | null | -233 | 3.6 | CATGAAAGAAGTCACC |
|
Position: -1
Score: 4.1 Sequence: AATGACATCAATCACG
Locus tag: Synpcc7942_1969
|
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| Synpcc7942_1969 | -1 | 4.1 | AATGACATCAATCACG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0129 | ||||
| Ortholog function: Transcription regulator, AbrB family | ||||
| Synechococcus elongatus PCC 7942 | Synpcc7942_1969 | -1 | 4.1 | AATGACATCAATCACG |
|
Position: -63
Score: 4.2 Sequence: TGTGATTAAGCACACA
Locus tag: Synpcc7942_2079
|
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| Synpcc7942_2079 | -63 | 4.2 | TGTGATTAAGCACACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackA | ||||
| Ortholog function: Acetate kinase (EC 2.7.2.1) | ||||
| Cyanothece sp. ATCC 51142 | cce_0800 | -23 | 3.6 | CATGATTTTATTCAGA |
| Cyanothece sp. PCC 8801 | PCC8801_3887 | -203 | 4.3 | GGTGACAGAAATCAAA |
| Microcystis aeruginosa NIES-843 | MAE_02800 | -44 | 3.6 | TTTGATTATGATCGCC |
| Nostoc sp. PCC 7120 | all2561 | -44 | 4.4 | AATGATATAGCTCACA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2079 | -63 | 4.2 | TGTGATTAAGCACACA |