Propagation of Fur regulog to Synechococcus elongatus PCC 7942

Reference regulog properties
Source regulog:	Fur - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Synechococcus elongatus PCC 7942
Orthologous TF(s)	Synpcc7942_0987
Regulated genes	16

Built upon 167 sites [see more]

Predicted regulatory interactions in *Synechococcus elongatus PCC 7942*
	Locus tag	Position	Score	Sequence
Position: -1 Score: 3 Sequence: TATGAAATCGGTCTGGAAT Locus tag: Synpcc7942_0574
	Synpcc7942_0574	-1	3	TATGAAATCGGTCTGGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2351
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_A2351	-216	2.9	TTTATTATTGTTTTTTAGT
Cyanothece sp. ATCC 51142	cce_3809	-132	3.2	GTTTTTATTTTCTGTCAAT
Cyanothece sp. PCC 8801	PCC8801_2575	-247	3.1	ATTTCTCCTTATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_2644	-122	4.2	AATTAGATTAATTTTGAAT

Position: -205 Score: 3.3 Sequence: TATGAGTTCCGGTCTCGAT Locus tag: Synpcc7942_0655
	Synpcc7942_0655	-205	3.3	TATGAGTTCCGGTCTCGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803	sll0849	-298	3.3	AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142	cce_0660	-298	3.4	ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425	Cyan7425_5031	-91	3.1	GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843	MAE_41160	-274	2.9	ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab	CYA_2647	-106	3	TTTATTAATTTTTCGTAAG

Position: -53 Score: 3.2 Sequence: ACAGATTTTAATATTTATT Position: -1 Score: 2.9 Sequence: CATGCCGAGCATTCGCTTT Locus tag: Synpcc7942_0698
	Synpcc7942_0698	-53	3.2	ACAGATTTTAATATTTATT
		-1	2.9	CATGCCGAGCATTCGCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdx
Ortholog function: Predicted ferredoxin
Nostoc sp. PCC 7120	asl0884	-90	3.5	ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab	CYA_0643	-92	2.8	ATTAAAAATATGATTTAAA

Position: -43 Score: 3 Sequence: GAAGAAAATTTTTCGGAAC Locus tag: Synpcc7942_0699
	Synpcc7942_0699	-43	3	GAAGAAAATTTTTCGGAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142	cce_0893	-29	3	TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801	PCC8801_2861	-49	3.8	ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120	asl0883	-90	3.5	ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab	CYA_0642	-92	2.8	ATTAAAAATATGATTTAAA

Position: -4 Score: 3 Sequence: ATTCATGACCGGTTTTATT Locus tag: Synpcc7942_0843
	Synpcc7942_0843	-4	3	ATTCATGACCGGTTTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0913
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_A0913	-146	2.2	TTTTTACAACATTTTTAAA
		-68	3.8	AATGAGAAAATTTTGATAT
Synechocystis sp. PCC 6803	sll1911	-59	4.2	GTTGTTAAAATTTAACAAT
Cyanothece sp. ATCC 51142	cce_0019	-75	3.1	TTTTTTAATATTTTTTGAT
Cyanothece sp. PCC 8801	PCC8801_2812	-67	4.4	TATGATAAAATTTATTAAA
Trichodesmium erythraeum IMS101	Tery_4773	-64	2.4	TTTATGAAATATTTATGAT

Position: -30 Score: 4 Sequence: AATAAAAAAGTTTCGTAAT Locus tag: Synpcc7942_0938
	Synpcc7942_0938	-30	4	AATAAAAAAGTTTCGTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_4396
Ortholog function: Predicted transcription regualator, ArsR family
Cyanothece sp. PCC 7425	Cyan7425_2984	-78	2.7	TATATGAATATCTTGTAAT
		-48	3.9	ATTGCAATTATATTACAAT
Synechococcus elongatus PCC 7942	Synpcc7942_0938	-30	4	AATAAAAAAGTTTCGTAAT
Thermosynechococcus elongatus BP-1	null	-45	4	AATTAAAATTATATTCATC

Position: -81 Score: 4.2 Sequence: ATTGAGAATAAATCGCAGA Locus tag: Synpcc7942_1406
	Synpcc7942_1406	-81	4.2	ATTGAGAATAAATCGCAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_A0871	-83	5.1	GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142	cce_3801	-163	4.2	ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425	Cyan7425_3510	-105	5.3	ATTGAGAATAATTTTCAAA
		-60	4	GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843	MAE_12460	-117	4.4	TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101	Tery_3222	-94	5.1	AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942	Synpcc7942_1406	-81	4.2	ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab	CYA_2794	-26	3.8	AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421	gll1012	-64	3.7	ATTGACAATTAATTGCAGC

Position: -202 Score: 3.1 Sequence: TGTTCAATTGATTTTCGAT Locus tag: Synpcc7942_1419
	Synpcc7942_1419	-202	3.1	TGTTCAATTGATTTTCGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_A2347	-126	3.6	TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803	slr0749	-173	3.3	ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801	PCC8801_0791	-242	2.7	ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843	MAE_16230	-150	2.8	ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1	null	-211	2.8	TTTTGTATTTTTGTTTAAT

Position: -177 Score: 3.7 Sequence: ATTGAGAGTAATTTCTGAT Position: -45 Score: 5.2 Sequence: ATTGAGAATTATTGTAAAT Position: -35 Score: 4.3 Sequence: ATTGTAAATTACTGGCATT Locus tag: Synpcc7942_1542
	Synpcc7942_1542	-177	3.7	ATTGAGAGTAATTTCTGAT
		-45	5.2	ATTGAGAATTATTGTAAAT
		-35	4.3	ATTGTAAATTACTGGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Photosystem II chlorophyll-binding protein
Synechocystis sp. PCC 6803	sll0247	-269	2.8	ATTTCTTAATAATTTTAGT
Cyanothece sp. ATCC 51142	cce_1785	-18	4.4	ATTGCAAATCTTTTTAAAT
Cyanothece sp. PCC 7425	Cyan7425_2434	-61	4.7	ATTGAGTTTATTTCTCAAC
Nostoc sp. PCC 7120	all4001	-161	4.8	ATTAAGAATCTTTTTCAAT
Trichodesmium erythraeum IMS101	Tery_1667	-156	3.2	TTTTATAATTTCTTTTAAA
Synechococcus elongatus PCC 7942	Synpcc7942_1542	-45	5.2	ATTGAGAATTATTGTAAAT
Thermosynechococcus elongatus BP-1	null	-121	5.5	AATGCTATTAATTCTCAAT

Position: -28 Score: 3.1 Sequence: ATTGCAAATATCTGGAGAT Position: -17 Score: 3.5 Sequence: CTGGAGATTGCTAAGCAAT Position: -11 Score: 3.1 Sequence: ATTGCTAAGCAATGACGAT Locus tag: Synpcc7942_1637
	Synpcc7942_1637	-28	3.1	ATTGCAAATATCTGGAGAT
		-17	3.5	CTGGAGATTGCTAAGCAAT
		-11	3.1	ATTGCTAAGCAATGACGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803	sll0849	-298	3.3	AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142	cce_0660	-298	3.4	ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425	Cyan7425_5031	-91	3.1	GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843	MAE_41160	-274	2.9	ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab	CYA_2647	-106	3	TTTATTAATTTTTCGTAAG

Position: -264 Score: 4.1 Sequence: ATTCTTGATGGTTCTCAAT Locus tag: Synpcc7942_1849
	Synpcc7942_1849	-264	4.1	ATTCTTGATGGTTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigC
Ortholog function: RNA polymerase sigma-subunit
Nostoc sp. PCC 7120	all1692	-320	3.5	AATAAACATAATTTTTACT

Position: -296 Score: 3.3 Sequence: TCTTTGAATTATTGTTAAT Position: -290 Score: 3.1 Sequence: AATTATTGTTAATCGCCTT Locus tag: Synpcc7942_2049
	Synpcc7942_2049	-296	3.3	TCTTTGAATTATTGTTAAT
		-290	3.1	AATTATTGTTAATCGCCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002	SYNPCC7002_A1961	-206	3.4	AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142	cce_0989	-205	3.4	AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843	MAE_47560	-297	3.2	ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120	alr5154	-177	3.4	ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101	Tery_4669	-80	4	ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942	Synpcc7942_2049	-296	3.3	TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421	gvip470	-195	2.2	TTTTTAAAAATTGTTAAGT

Position: -108 Score: 3.4 Sequence: TATGAAGTTACTTGTCAAA Position: -38 Score: 3.1 Sequence: TTTTCTGTTAGAACTCAAT Locus tag: Synpcc7942_2137
	Synpcc7942_2137	-108	3.4	TATGAAGTTACTTGTCAAA
		-38	3.1	TTTTCTGTTAGAACTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002	SYNPCC7002_A1018	-57	3.8	ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142	cce_4358	-183	2.7	AATAAATAATTTTTGTAAA
		-138	2.3	ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801	PCC8801_4320	-186	2.3	ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843	MAE_12190	-247	2.8	ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120	all4365	-272	2.9	GTTTTTTATTTTTTTCATC
		-232	3	AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101	Tery_3224	-65	3	GTTTAAAATTTTTTGATAT

Position: -168 Score: 3.2 Sequence: ATTCACTAAAGATGACAAT Position: -158 Score: 4.3 Sequence: GATGACAATATTTTTCGAT Position: -102 Score: 3 Sequence: TACGAGTTCTGTAGTTATT Position: -46 Score: 3 Sequence: TTTTTGAAGATTTAGCGTT Locus tag: Synpcc7942_2601
	Synpcc7942_2601	-168	3.2	ATTCACTAAAGATGACAAT
		-158	4.3	GATGACAATATTTTTCGAT
		-102	3	TACGAGTTCTGTAGTTATT
		-46	3	TTTTTGAAGATTTAGCGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801	PCC8801_0256	-185	2.2	TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843	MAE_22920	-282	2.5	TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_1780	-278	3.5	ATTGTTAAAATTATGAAAT
		-167	3.3	ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942	Synpcc7942_2601	-158	4.3	GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313	PMT1340	-30	2.6	ATTTAAATTATTTTATTGT

Position: -25 Score: 3.2 Sequence: TGCGACTCCTATTTTCAAT Locus tag: Synpcc7942_2603
	Synpcc7942_2603	-25	3.2	TGCGACTCCTATTTTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxA
Ortholog function: Cytochrome c oxidase, subunit I
Cyanothece sp. ATCC 51142	cce_1976	-136	3.7	AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0568	-152	2.7	TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843	MAE_22940	-216	2.5	TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120	alr0951	-134	3.7	TTTACTCAAGATTATTAAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fur regulog to Synechococcus elongatus PCC 7942

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --