Propagation of Fur regulog to Synechococcus elongatus PCC 7942
| Source regulog: | Fur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Synechococcus elongatus PCC 7942 |
| Orthologous TF(s) | Synpcc7942_0987 |
| Regulated genes | 16 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -1
Score: 3 Sequence: TATGAAATCGGTCTGGAAT
Locus tag: Synpcc7942_0574
|
||||
| Synpcc7942_0574 | -1 | 3 | TATGAAATCGGTCTGGAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A2351 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2351 | -216 | 2.9 | TTTATTATTGTTTTTTAGT |
| Cyanothece sp. ATCC 51142 | cce_3809 | -132 | 3.2 | GTTTTTATTTTCTGTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_2575 | -247 | 3.1 | ATTTCTCCTTATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_2644 | -122 | 4.2 | AATTAGATTAATTTTGAAT |
|
Position: -205
Score: 3.3 Sequence: TATGAGTTCCGGTCTCGAT
Locus tag: Synpcc7942_0655
|
||||
| Synpcc7942_0655 | -205 | 3.3 | TATGAGTTCCGGTCTCGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -53
Score: 3.2 Sequence: ACAGATTTTAATATTTATT
Position: -1
Score: 2.9 Sequence: CATGCCGAGCATTCGCTTT
Locus tag: Synpcc7942_0698
|
||||
| Synpcc7942_0698 | -53 | 3.2 | ACAGATTTTAATATTTATT | |
| -1 | 2.9 | CATGCCGAGCATTCGCTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fdx | ||||
| Ortholog function: Predicted ferredoxin | ||||
| Nostoc sp. PCC 7120 | asl0884 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0643 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -43
Score: 3 Sequence: GAAGAAAATTTTTCGGAAC
Locus tag: Synpcc7942_0699
|
||||
| Synpcc7942_0699 | -43 | 3 | GAAGAAAATTTTTCGGAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbM | ||||
| Ortholog function: Photosystem II reaction center M protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0893 | -29 | 3 | TTTCTTATAATTTCTTAAC |
| Cyanothece sp. PCC 8801 | PCC8801_2861 | -49 | 3.8 | ATTGTAAAAAAATATTAAC |
| Nostoc sp. PCC 7120 | asl0883 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0642 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -4
Score: 3 Sequence: ATTCATGACCGGTTTTATT
Locus tag: Synpcc7942_0843
|
||||
| Synpcc7942_0843 | -4 | 3 | ATTCATGACCGGTTTTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0913 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0913 | -146 | 2.2 | TTTTTACAACATTTTTAAA |
| -68 | 3.8 | AATGAGAAAATTTTGATAT | ||
| Synechocystis sp. PCC 6803 | sll1911 | -59 | 4.2 | GTTGTTAAAATTTAACAAT |
| Cyanothece sp. ATCC 51142 | cce_0019 | -75 | 3.1 | TTTTTTAATATTTTTTGAT |
| Cyanothece sp. PCC 8801 | PCC8801_2812 | -67 | 4.4 | TATGATAAAATTTATTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4773 | -64 | 2.4 | TTTATGAAATATTTATGAT |
|
Position: -30
Score: 4 Sequence: AATAAAAAAGTTTCGTAAT
Locus tag: Synpcc7942_0938
|
||||
| Synpcc7942_0938 | -30 | 4 | AATAAAAAAGTTTCGTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cce_4396 | ||||
| Ortholog function: Predicted transcription regualator, ArsR family | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_2984 | -78 | 2.7 | TATATGAATATCTTGTAAT |
| -48 | 3.9 | ATTGCAATTATATTACAAT | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_0938 | -30 | 4 | AATAAAAAAGTTTCGTAAT |
| Thermosynechococcus elongatus BP-1 | null | -45 | 4 | AATTAAAATTATATTCATC |
|
Position: -81
Score: 4.2 Sequence: ATTGAGAATAAATCGCAGA
Locus tag: Synpcc7942_1406
|
||||
| Synpcc7942_1406 | -81 | 4.2 | ATTGAGAATAAATCGCAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: afuC | ||||
| Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0871 | -83 | 5.1 | GTTGAGAATAGTTCTTAAT |
| Cyanothece sp. ATCC 51142 | cce_3801 | -163 | 4.2 | ATTGAAAATTAATGCTAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_3510 | -105 | 5.3 | ATTGAGAATAATTTTCAAA |
| -60 | 4 | GTTGAATAATAGTCTTAAT | ||
| Microcystis aeruginosa NIES-843 | MAE_12460 | -117 | 4.4 | TTTGAGAAAGTTTCCTAAT |
| Trichodesmium erythraeum IMS101 | Tery_3222 | -94 | 5.1 | AATGAAAAAAATATTCAAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1406 | -81 | 4.2 | ATTGAGAATAAATCGCAGA |
| Synechococcus sp. JA-3-3Ab | CYA_2794 | -26 | 3.8 | AGTGAAAATCTTTTGCAAC |
| Gloeobacter violaceus PCC 7421 | gll1012 | -64 | 3.7 | ATTGACAATTAATTGCAGC |
|
Position: -202
Score: 3.1 Sequence: TGTTCAATTGATTTTCGAT
Locus tag: Synpcc7942_1419
|
||||
| Synpcc7942_1419 | -202 | 3.1 | TGTTCAATTGATTTTCGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlL | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2347 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Synechocystis sp. PCC 6803 | slr0749 | -173 | 3.3 | ATTTTATTTTTGTCTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0791 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16230 | -150 | 2.8 | ATTTATATAATTTTTAAGC |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -177
Score: 3.7 Sequence: ATTGAGAGTAATTTCTGAT
Position: -45
Score: 5.2 Sequence: ATTGAGAATTATTGTAAAT
Position: -35
Score: 4.3 Sequence: ATTGTAAATTACTGGCATT
Locus tag: Synpcc7942_1542
|
||||
| Synpcc7942_1542 | -177 | 3.7 | ATTGAGAGTAATTTCTGAT | |
| -45 | 5.2 | ATTGAGAATTATTGTAAAT | ||
| -35 | 4.3 | ATTGTAAATTACTGGCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: isiA | ||||
| Ortholog function: Photosystem II chlorophyll-binding protein | ||||
| Synechocystis sp. PCC 6803 | sll0247 | -269 | 2.8 | ATTTCTTAATAATTTTAGT |
| Cyanothece sp. ATCC 51142 | cce_1785 | -18 | 4.4 | ATTGCAAATCTTTTTAAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_2434 | -61 | 4.7 | ATTGAGTTTATTTCTCAAC |
| Nostoc sp. PCC 7120 | all4001 | -161 | 4.8 | ATTAAGAATCTTTTTCAAT |
| Trichodesmium erythraeum IMS101 | Tery_1667 | -156 | 3.2 | TTTTATAATTTCTTTTAAA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1542 | -45 | 5.2 | ATTGAGAATTATTGTAAAT |
| Thermosynechococcus elongatus BP-1 | null | -121 | 5.5 | AATGCTATTAATTCTCAAT |
|
Position: -28
Score: 3.1 Sequence: ATTGCAAATATCTGGAGAT
Position: -17
Score: 3.5 Sequence: CTGGAGATTGCTAAGCAAT
Position: -11
Score: 3.1 Sequence: ATTGCTAAGCAATGACGAT
Locus tag: Synpcc7942_1637
|
||||
| Synpcc7942_1637 | -28 | 3.1 | ATTGCAAATATCTGGAGAT | |
| -17 | 3.5 | CTGGAGATTGCTAAGCAAT | ||
| -11 | 3.1 | ATTGCTAAGCAATGACGAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -264
Score: 4.1 Sequence: ATTCTTGATGGTTCTCAAT
Locus tag: Synpcc7942_1849
|
||||
| Synpcc7942_1849 | -264 | 4.1 | ATTCTTGATGGTTCTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sigC | ||||
| Ortholog function: RNA polymerase sigma-subunit | ||||
| Nostoc sp. PCC 7120 | all1692 | -320 | 3.5 | AATAAACATAATTTTTACT |
|
Position: -296
Score: 3.3 Sequence: TCTTTGAATTATTGTTAAT
Position: -290
Score: 3.1 Sequence: AATTATTGTTAATCGCCTT
Locus tag: Synpcc7942_2049
|
||||
| Synpcc7942_2049 | -296 | 3.3 | TCTTTGAATTATTGTTAAT | |
| -290 | 3.1 | AATTATTGTTAATCGCCTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psaA | ||||
| Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1 | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1961 | -206 | 3.4 | AGTTTTAAATATTGTTAAT |
| Cyanothece sp. ATCC 51142 | cce_0989 | -205 | 3.4 | AATTTTAATTATTGTTAAG |
| Microcystis aeruginosa NIES-843 | MAE_47560 | -297 | 3.2 | ATTAATAAACTTTTGTAAA |
| Nostoc sp. PCC 7120 | alr5154 | -177 | 3.4 | ATTTTGAATTATTGTTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4669 | -80 | 4 | ATTGATAATTCTTTACAAC |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2049 | -296 | 3.3 | TCTTTGAATTATTGTTAAT |
| Gloeobacter violaceus PCC 7421 | gvip470 | -195 | 2.2 | TTTTTAAAAATTGTTAAGT |
|
Position: -108
Score: 3.4 Sequence: TATGAAGTTACTTGTCAAA
Position: -38
Score: 3.1 Sequence: TTTTCTGTTAGAACTCAAT
Locus tag: Synpcc7942_2137
|
||||
| Synpcc7942_2137 | -108 | 3.4 | TATGAAGTTACTTGTCAAA | |
| -38 | 3.1 | TTTTCTGTTAGAACTCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlH | ||||
| Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1018 | -57 | 3.8 | ATAGTTATAAATTTTTAAT |
| Cyanothece sp. ATCC 51142 | cce_4358 | -183 | 2.7 | AATAAATAATTTTTGTAAA |
| -138 | 2.3 | ATTTGTCAATATTTGTAAC | ||
| Cyanothece sp. PCC 8801 | PCC8801_4320 | -186 | 2.3 | ATTTGTCAATATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_12190 | -247 | 2.8 | ATTAAATATTAATTTTTGT |
| Nostoc sp. PCC 7120 | all4365 | -272 | 2.9 | GTTTTTTATTTTTTTCATC |
| -232 | 3 | AATATTAATTTTTCTTTAC | ||
| Trichodesmium erythraeum IMS101 | Tery_3224 | -65 | 3 | GTTTAAAATTTTTTGATAT |
|
Position: -168
Score: 3.2 Sequence: ATTCACTAAAGATGACAAT
Position: -158
Score: 4.3 Sequence: GATGACAATATTTTTCGAT
Position: -102
Score: 3 Sequence: TACGAGTTCTGTAGTTATT
Position: -46
Score: 3 Sequence: TTTTTGAAGATTTAGCGTT
Locus tag: Synpcc7942_2601
|
||||
| Synpcc7942_2601 | -168 | 3.2 | ATTCACTAAAGATGACAAT | |
| -158 | 4.3 | GATGACAATATTTTTCGAT | ||
| -102 | 3 | TACGAGTTCTGTAGTTATT | ||
| -46 | 3 | TTTTTGAAGATTTAGCGTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaA | ||||
| Ortholog function: Heme A synthase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0256 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22920 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1780 | -278 | 3.5 | ATTGTTAAAATTATGAAAT |
| -167 | 3.3 | ATTAAAAAAAAATTTAAAA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_2601 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1340 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -25
Score: 3.2 Sequence: TGCGACTCCTATTTTCAAT
Locus tag: Synpcc7942_2603
|
||||
| Synpcc7942_2603 | -25 | 3.2 | TGCGACTCCTATTTTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxA | ||||
| Ortholog function: Cytochrome c oxidase, subunit I | ||||
| Cyanothece sp. ATCC 51142 | cce_1976 | -136 | 3.7 | AATTTCAATCAATTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0568 | -152 | 2.7 | TTTGTTTATTATTTGTTAC |
| Microcystis aeruginosa NIES-843 | MAE_22940 | -216 | 2.5 | TTTTAGATATTCTTTAGAT |
| Nostoc sp. PCC 7120 | alr0951 | -134 | 3.7 | TTTACTCAAGATTATTAAT |