Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Crp regulog to Acaryochloris marina MBIC11017

Reference regulog properties
Source regulog: Crp - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Phylum: Cyanobacteria
Propagated regulon:
Target genome Acaryochloris marina MBIC11017
Orthologous TF(s) AM1_5140
Regulated genes 18
Built upon 106 sites [see more]
Predicted regulatory interactions in Acaryochloris marina MBIC11017
Locus tag Position Score Sequence
Position: -13
Score: 3.5
Sequence: TGTGGGCCAGATCATG
Locus tag: AM1_0445
AM1_0445 -13 3.5 TGTGGGCCAGATCATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Cyanothece sp. ATCC 51142 cce_0800 -23 3.6 CATGATTTTATTCAGA
Cyanothece sp. PCC 8801 PCC8801_3887 -203 4.3 GGTGACAGAAATCAAA
Microcystis aeruginosa NIES-843 MAE_02800 -44 3.6 TTTGATTATGATCGCC
Nostoc sp. PCC 7120 all2561 -44 4.4 AATGATATAGCTCACA
Synechococcus elongatus PCC 7942 Synpcc7942_2079 -63 4.2 TGTGATTAAGCACACA
Position: 3
Score: 3.7
Sequence: ATTGATTTAAAGCAGC
Locus tag: AM1_2069
AM1_2069 3 3.7 ATTGATTTAAAGCAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: serS
Ortholog function: Seryl-tRNA synthetase (EC 6.1.1.11)
Synechocystis sp. PCC 6803 slr1703 -211 3.6 ATTGATAGAAGGCACT
Cyanothece sp. ATCC 51142 cce_0927 -170 4 GTTGATAAAGTTCATA
Cyanothece sp. PCC 8801 PCC8801_3186 -155 3.7 TTTGATCAATTTGACA
Cyanothece sp. PCC 7425 Cyan7425_4645 -420 3.7 TGTGATACATCACACC
Thermosynechococcus elongatus BP-1 null 3 4.2 ATTGATCTAAAACAAC
Position: -258
Score: 3.8
Sequence: TCTGAATTATGTCAAA
Locus tag: AM1_2307
AM1_2307 -258 3.8 TCTGAATTATGTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppa
Ortholog function: inorganic pyrophosphatase
Cyanothece sp. ATCC 51142 cce_4329 -265 4.5 TGTGATTATTATCAAA
-104 4.4 TGTGATTATTATCAAC
Cyanothece sp. PCC 8801 PCC8801_2042 -177 4 TGTGATACTCATCATA
Cyanothece sp. PCC 7425 Cyan7425_1645 -273 3.7 ACTGATTAAGGGCACT
Nostoc sp. PCC 7120 all3570 -160 3.7 TGTGATATTTTTCCAC
Trichodesmium erythraeum IMS101 Tery_1519 -237 3.9 AATGATAGAGTTCACG
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