Propagation of Crp regulog to Nodularia spumigena CCY9414

Reference regulog properties
Source regulog:	Crp - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	repressor (activator)
Biological process:
Effector:	Cyclic 3',5'-AMP
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Nodularia spumigena CCY9414
Orthologous TF(s)	N9414_13490
Regulated genes	20

Built upon 106 sites [see more]

Predicted regulatory interactions in *Nodularia spumigena CCY9414*
	Locus tag	Position	Score	Sequence
Position: -39 Score: 3.4 Sequence: ACTGACTGAGGGCAAA Locus tag: N9414_14760
	N9414_14760	-39	3.4	ACTGACTGAGGGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxA
Ortholog function: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
Nostoc sp. PCC 7120	alr2515	-222	3.1	TCTGGAATAATTCCCC
Trichodesmium erythraeum IMS101	Tery_1778	-193	4	TGTAACCTAAAACAAA
		-93	3.9	TCTGAGAAATATCAAA

Position: 21 Score: 4.5 Sequence: AGTGACCGAATTCACA Locus tag: N9414_15010
	N9414_15010	21	4.5	AGTGACCGAATTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifX
Ortholog function: Nitrogen fixation protein
Cyanothece sp. PCC 8801	PCC8801_1790	21	4.3	AGTGACAATGTTCATA
Nostoc sp. PCC 7120	all1436	21	4.3	AGTGACAGAATTCATA
Trichodesmium erythraeum IMS101	Tery_4140	21	4.3	ACTGATTTTATTCATA

Position: -240 Score: 3.1 Sequence: AGTAAACAAATTGATA Position: -143 Score: 3.3 Sequence: TGTGGCATTTAGCCCA Locus tag: N9414_15110
	N9414_15110	-240	3.1	AGTAAACAAATTGATA
		-143	3.3	TGTGGCATTTAGCCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifB
Ortholog function: FeMo nitrogenase cofactor biosynthesis protein
Cyanothece sp. ATCC 51142	cce_0554	-123	4	GGTGGTATAAATGACA
Cyanothece sp. PCC 7425	Cyan7425_2361	-40	3.9	ACTGTTATAAAGCACC
Nostoc sp. PCC 7120	all1517	-299	3.1	ACTGCTATAAATCTTA
Trichodesmium erythraeum IMS101	Tery_4133	-356	3.7	TATGACTTATAGCATG

Position: 27 Score: 3.6 Sequence: TGTGTACCTAGTCAAA Locus tag: N9414_05454
	N9414_05454	27	3.6	TGTGTACCTAGTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcC
Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated
Cyanothece sp. ATCC 51142	cce_2911	5	4.1	AATGTTTAAAGTCACC
Cyanothece sp. PCC 8801	PCC8801_2788	5	3.9	GATGTTTAAAGTCACC
Microcystis aeruginosa NIES-843	MAE_10240	5	4.1	GATGTTCAAAATCACC
Trichodesmium erythraeum IMS101	Tery_3647	5	4.2	AATGTTTAAGATCACA
Synechococcus sp. JA-3-3Ab	CYA_2225	5	3.7	CATGTTTAAGATCACG
Synechococcus sp. WH 8102	SYNW0483	5	3.9	GTTGTTCAAAGTCACC
Thermosynechococcus elongatus BP-1	null	-233	3.6	CATGAAAGAAGTCACC

Position: -144 Score: 3.8 Sequence: AATGACCAATAACAAA Locus tag: N9414_16589
	N9414_16589	-144	3.8	AATGACCAATAACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0687
Ortholog function: Conserved hypothetical protein
Synechocystis sp. PCC 6803	slr0013	-56	4.1	TTTGATCAAAGTCCTA
Cyanothece sp. ATCC 51142	cce_3288	-137	3.8	TTTGACTTAAATAACC
Cyanothece sp. PCC 8801	PCC8801_0091	-153	3.8	TTTGATCTCGATCATT
Prochlorococcus marinus str. MIT 9313	PMT0719	17	3.7	TTTGAAACAATTCACC

Position: -56 Score: 3.7 Sequence: TATGATTGGGTTCAAA Position: -1 Score: 4.1 Sequence: TGTGATTAGAGTCGCA Locus tag: N9414_23143
	N9414_23143	-56	3.7	TATGATTGGGTTCAAA
		-1	4.1	TGTGATTAGAGTCGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gap2
Ortholog function: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
Synechococcus sp. PCC 7002	SYNPCC7002_A0106	-65	3.7	TATGATTGGGGTCATC
Cyanothece sp. PCC 8801	PCC8801_2557	-31	4	ATTGAGCTAAAGCATA
Nostoc sp. PCC 7120	all5062	-56	3.8	TATGATTGGGGTCAAA
		-1	4.1	TGTGATTAGAGTCGCA
Trichodesmium erythraeum IMS101	Tery_4030	-410	3.6	TATGATAATTCTCAAG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Crp regulog to Nodularia spumigena CCY9414

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --