Propagation of Fur regulog to Nodularia spumigena CCY9414
| Source regulog: | Fur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Nodularia spumigena CCY9414 |
| Orthologous TF(s) | N9414_08133 |
| Regulated genes | 37 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -341
Score: 3 Sequence: AATCAAGATGATTACTGAT
Position: -328
Score: 3.3 Sequence: ACTGATGAGTAATGGCAAT
Position: -321
Score: 3 Sequence: AGTAATGGCAATTAGCTAT
Position: -317
Score: 3.2 Sequence: ATGGCAATTAGCTATTAGT
Position: -310
Score: 3 Sequence: TTAGCTATTAGTTATTTAG
Position: -81
Score: 3 Sequence: CTCAGTAACTATTTTTAAT
Locus tag: N9414_04450
|
||||
| N9414_04450 | -341 | 3 | AATCAAGATGATTACTGAT | |
| -328 | 3.3 | ACTGATGAGTAATGGCAAT | ||
| -321 | 3 | AGTAATGGCAATTAGCTAT | ||
| -317 | 3.2 | ATGGCAATTAGCTATTAGT | ||
| -310 | 3 | TTAGCTATTAGTTATTTAG | ||
| -81 | 3 | CTCAGTAACTATTTTTAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaB | ||||
| Ortholog function: Protoheme IX farnesyltransferase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0255 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22910 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1781 | -41 | 4.1 | AATTATAACCAGTTTCAAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2600 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1339 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -331
Score: 3.1 Sequence: GTTTTAAGATTTTATTAAT
Position: -330
Score: 3 Sequence: TTTTAAGATTTTATTAATT
Position: -327
Score: 3.1 Sequence: TAAGATTTTATTAATTTTT
Position: -233
Score: 3.1 Sequence: TGTGAAAAAATTTAAGAAA
Position: -223
Score: 3 Sequence: TTTAAGAAAGAATTTAGAT
Position: -216
Score: 3 Sequence: AAGAATTTAGATTAGCAAA
Position: -206
Score: 3.4 Sequence: ATTAGCAAAGTTAATGATT
Position: -200
Score: 3.3 Sequence: AAAGTTAATGATTAATTAT
Position: -196
Score: 3.9 Sequence: TTAATGATTAATTATCAAT
Position: -190
Score: 3.4 Sequence: ATTAATTATCAATTGCTAT
Position: -61
Score: 3.1 Sequence: GTTACTAAAAATTGAAAAT
Position: -51
Score: 3.2 Sequence: ATTGAAAATTTTAAGAGAG
Locus tag: N9414_04455
|
||||
| N9414_04455 | -331 | 3.1 | GTTTTAAGATTTTATTAAT | |
| -330 | 3 | TTTTAAGATTTTATTAATT | ||
| -327 | 3.1 | TAAGATTTTATTAATTTTT | ||
| -233 | 3.1 | TGTGAAAAAATTTAAGAAA | ||
| -223 | 3 | TTTAAGAAAGAATTTAGAT | ||
| -216 | 3 | AAGAATTTAGATTAGCAAA | ||
| -206 | 3.4 | ATTAGCAAAGTTAATGATT | ||
| -200 | 3.3 | AAAGTTAATGATTAATTAT | ||
| -196 | 3.9 | TTAATGATTAATTATCAAT | ||
| -190 | 3.4 | ATTAATTATCAATTGCTAT | ||
| -61 | 3.1 | GTTACTAAAAATTGAAAAT | ||
| -51 | 3.2 | ATTGAAAATTTTAAGAGAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaA | ||||
| Ortholog function: Heme A synthase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0256 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22920 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1780 | -278 | 3.5 | ATTGTTAAAATTATGAAAT |
| -167 | 3.3 | ATTAAAAAAAAATTTAAAA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_2601 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1340 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -244
Score: 4 Sequence: ATAGCAATTGATAATTAAT
Position: -238
Score: 3.5 Sequence: ATTGATAATTAATCATTAA
Position: -234
Score: 3.2 Sequence: ATAATTAATCATTAACTTT
Position: -228
Score: 3.1 Sequence: AATCATTAACTTTGCTAAT
Position: -218
Score: 3.3 Sequence: TTTGCTAATCTAAATTCTT
Position: -211
Score: 3.2 Sequence: ATCTAAATTCTTTCTTAAA
Position: 26
Score: 3.1 Sequence: ATTAATAATTGGTGTCGTC
Locus tag: N9414_04460
|
||||
| N9414_04460 | -244 | 4 | ATAGCAATTGATAATTAAT | |
| -238 | 3.5 | ATTGATAATTAATCATTAA | ||
| -234 | 3.2 | ATAATTAATCATTAACTTT | ||
| -228 | 3.1 | AATCATTAACTTTGCTAAT | ||
| -218 | 3.3 | TTTGCTAATCTAAATTCTT | ||
| -211 | 3.2 | ATCTAAATTCTTTCTTAAA | ||
| 26 | 3.1 | ATTAATAATTGGTGTCGTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxB | ||||
| Ortholog function: Cytochrome c oxidase, subunit II | ||||
| Cyanothece sp. ATCC 51142 | cce_1977 | -136 | 3.7 | AATTTCAATCAATTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0567 | -152 | 2.7 | TTTGTTTATTATTTGTTAC |
| Microcystis aeruginosa NIES-843 | MAE_22930 | -216 | 2.5 | TTTTAGATATTCTTTAGAT |
| Nostoc sp. PCC 7120 | alr0950 | -134 | 3.7 | TTTACTCAAGATTATTAAT |
|
Position: -40
Score: 3.2 Sequence: GCTGATAACTGTTAACTGT
Locus tag: N9414_04465
|
||||
| N9414_04465 | -40 | 3.2 | GCTGATAACTGTTAACTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxA | ||||
| Ortholog function: Cytochrome c oxidase, subunit I | ||||
| Cyanothece sp. ATCC 51142 | cce_1976 | -136 | 3.7 | AATTTCAATCAATTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0568 | -152 | 2.7 | TTTGTTTATTATTTGTTAC |
| Microcystis aeruginosa NIES-843 | MAE_22940 | -216 | 2.5 | TTTTAGATATTCTTTAGAT |
| Nostoc sp. PCC 7120 | alr0951 | -134 | 3.7 | TTTACTCAAGATTATTAAT |
|
Position: -201
Score: 3.2 Sequence: AGTAAACACTTTTCTAATT
Position: -184
Score: 3.9 Sequence: TTTGTCAAGATTTATAAAT
Position: -174
Score: 3.3 Sequence: TTTATAAATAAATATTTAT
Position: -173
Score: 3.1 Sequence: TTATAAATAAATATTTATT
Position: -168
Score: 3 Sequence: AATAAATATTTATTTTTTT
Position: -101
Score: 3 Sequence: TTTCTGATAAAAAATTAAT
Locus tag: N9414_04750
|
||||
| N9414_04750 | -201 | 3.2 | AGTAAACACTTTTCTAATT | |
| -184 | 3.9 | TTTGTCAAGATTTATAAAT | ||
| -174 | 3.3 | TTTATAAATAAATATTTAT | ||
| -173 | 3.1 | TTATAAATAAATATTTATT | ||
| -168 | 3 | AATAAATATTTATTTTTTT | ||
| -101 | 3 | TTTCTGATAAAAAATTAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlH | ||||
| Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1018 | -57 | 3.8 | ATAGTTATAAATTTTTAAT |
| Cyanothece sp. ATCC 51142 | cce_4358 | -183 | 2.7 | AATAAATAATTTTTGTAAA |
| -138 | 2.3 | ATTTGTCAATATTTGTAAC | ||
| Cyanothece sp. PCC 8801 | PCC8801_4320 | -186 | 2.3 | ATTTGTCAATATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_12190 | -247 | 2.8 | ATTAAATATTAATTTTTGT |
| Nostoc sp. PCC 7120 | all4365 | -272 | 2.9 | GTTTTTTATTTTTTTCATC |
| -232 | 3 | AATATTAATTTTTCTTTAC | ||
| Trichodesmium erythraeum IMS101 | Tery_3224 | -65 | 3 | GTTTAAAATTTTTTGATAT |
|
Position: -344
Score: 3 Sequence: ATAGAAAAAAAATAAAAAG
Position: -275
Score: 3.5 Sequence: TTGACGAATTGTTATCCTT
Position: -268
Score: 3.8 Sequence: ATTGTTATCCTTTGTAAAT
Position: -177
Score: 3.3 Sequence: AATTTGAATTATTGTTAAA
Position: -163
Score: 3 Sequence: TTAAAATGTGTTTAACAAT
Position: -136
Score: 3 Sequence: AATGAGTCTATAATTCAAC
Position: -107
Score: 3.1 Sequence: TTCCACATAGATTCTTCAT
Locus tag: N9414_14710
|
||||
| N9414_14710 | -344 | 3 | ATAGAAAAAAAATAAAAAG | |
| -275 | 3.5 | TTGACGAATTGTTATCCTT | ||
| -268 | 3.8 | ATTGTTATCCTTTGTAAAT | ||
| -177 | 3.3 | AATTTGAATTATTGTTAAA | ||
| -163 | 3 | TTAAAATGTGTTTAACAAT | ||
| -136 | 3 | AATGAGTCTATAATTCAAC | ||
| -107 | 3.1 | TTCCACATAGATTCTTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psaA | ||||
| Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1 | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1961 | -206 | 3.4 | AGTTTTAAATATTGTTAAT |
| Cyanothece sp. ATCC 51142 | cce_0989 | -205 | 3.4 | AATTTTAATTATTGTTAAG |
| Microcystis aeruginosa NIES-843 | MAE_47560 | -297 | 3.2 | ATTAATAAACTTTTGTAAA |
| Nostoc sp. PCC 7120 | alr5154 | -177 | 3.4 | ATTTTGAATTATTGTTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4669 | -80 | 4 | ATTGATAATTCTTTACAAC |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2049 | -296 | 3.3 | TCTTTGAATTATTGTTAAT |
| Gloeobacter violaceus PCC 7421 | gvip470 | -195 | 2.2 | TTTTTAAAAATTGTTAAGT |
|
Position: -80
Score: 3 Sequence: AAGAAAGACTAATTTCAAT
Position: -1
Score: 3.3 Sequence: TATGCAAAAAGTTCCTGTT
Locus tag: N9414_14755
|
||||
| N9414_14755 | -80 | 3 | AAGAAAGACTAATTTCAAT | |
| -1 | 3.3 | TATGCAAAAAGTTCCTGTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxB | ||||
| Ortholog function: Cytochrome c oxidase, subunit II | ||||
| Nostoc sp. PCC 7120 | alr2514 | -190 | 3 | AgTTAaAAagtTaaTaAgT |
|
Position: -55
Score: 3.3 Sequence: AATCATCATTCTAAACAAT
Locus tag: N9414_14765
|
||||
| N9414_14765 | -55 | 3.3 | AATCATCATTCTAAACAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxC | ||||
| Ortholog function: Cytochrome c oxidase, subunit III | ||||
| Cyanothece sp. ATCC 51142 | cce_1975 | -136 | 3.7 | AATTTCAATCAATTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0569 | -152 | 2.7 | TTTGTTTATTATTTGTTAC |
| Microcystis aeruginosa NIES-843 | MAE_22950 | -216 | 2.5 | TTTTAGATATTCTTTAGAT |
| Nostoc sp. PCC 7120 | alr2516 | -190 | 3 | AgTTAaAAagtTaaTaAgT |
|
Position: -123
Score: 3.4 Sequence: ATGGATAAACGTTAGCGTA
Locus tag: N9414_17598
|
||||
| N9414_17598 | -123 | 3.4 | ATGGATAAACGTTAGCGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cce_4533 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -128
Score: 3.8 Sequence: TTTGATAAACTTGATATTT
Position: -122
Score: 2.9 Sequence: AAACTTGATATTTCTTAAT
Position: -119
Score: 3.9 Sequence: CTTGATATTTCTTAATATT
Position: -112
Score: 3.4 Sequence: TTTCTTAATATTTTGTAAT
Position: -101
Score: 3 Sequence: TTTGTAATAAGCTACCATA
Position: -81
Score: 3.1 Sequence: ATTAAGTAGGATGGTCTAT
Position: -24
Score: 2.9 Sequence: CAGTCAAAAAGGTATCAAT
Position: -17
Score: 3 Sequence: AAAGGTATCAATCAGCTAT
Locus tag: N9414_00260
|
||||
| N9414_00260 | -128 | 3.8 | TTTGATAAACTTGATATTT | |
| -122 | 2.9 | AAACTTGATATTTCTTAAT | ||
| -119 | 3.9 | CTTGATATTTCTTAATATT | ||
| -112 | 3.4 | TTTCTTAATATTTTGTAAT | ||
| -101 | 3 | TTTGTAATAAGCTACCATA | ||
| -81 | 3.1 | ATTAAGTAGGATGGTCTAT | ||
| -24 | 2.9 | CAGTCAAAAAGGTATCAAT | ||
| -17 | 3 | AAAGGTATCAATCAGCTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fdx | ||||
| Ortholog function: Predicted ferredoxin | ||||
| Nostoc sp. PCC 7120 | asl0884 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0643 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -62
Score: 3.3 Sequence: ATCGATAATGCTATTCTAA
Locus tag: N9414_00265
|
||||
| N9414_00265 | -62 | 3.3 | ATCGATAATGCTATTCTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbM | ||||
| Ortholog function: Photosystem II reaction center M protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0893 | -29 | 3 | TTTCTTATAATTTCTTAAC |
| Cyanothece sp. PCC 8801 | PCC8801_2861 | -49 | 3.8 | ATTGTAAAAAAATATTAAC |
| Nostoc sp. PCC 7120 | asl0883 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0642 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -281
Score: 3.1 Sequence: AATAATTCATCTTCCCAAT
Position: -264
Score: 3.6 Sequence: ATTGCTAAAAACAGTTTTT
Position: -190
Score: 3.4 Sequence: ATTTAAATTATTAAGTTTT
Position: -154
Score: 4 Sequence: TTTAATAAATACTTGCAAT
Position: -128
Score: 3.1 Sequence: ATGCAGAATGCTGAACAAT
Position: -76
Score: 3.2 Sequence: ATTGGGAAACAACGTCAAG
Position: -56
Score: 3.1 Sequence: CCTGAAAGTATCAACCAAT
Position: -35
Score: 3.7 Sequence: ATTGAGTCCTTTTAGCAAC
Locus tag: N9414_11549
|
||||
| N9414_11549 | -281 | 3.1 | AATAATTCATCTTCCCAAT | |
| -264 | 3.6 | ATTGCTAAAAACAGTTTTT | ||
| -190 | 3.4 | ATTTAAATTATTAAGTTTT | ||
| -154 | 4 | TTTAATAAATACTTGCAAT | ||
| -128 | 3.1 | ATGCAGAATGCTGAACAAT | ||
| -76 | 3.2 | ATTGGGAAACAACGTCAAG | ||
| -56 | 3.1 | CCTGAAAGTATCAACCAAT | ||
| -35 | 3.7 | ATTGAGTCCTTTTAGCAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: isiA | ||||
| Ortholog function: Photosystem II chlorophyll-binding protein | ||||
| Synechocystis sp. PCC 6803 | sll0247 | -269 | 2.8 | ATTTCTTAATAATTTTAGT |
| Cyanothece sp. ATCC 51142 | cce_1785 | -18 | 4.4 | ATTGCAAATCTTTTTAAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_2434 | -61 | 4.7 | ATTGAGTTTATTTCTCAAC |
| Nostoc sp. PCC 7120 | all4001 | -161 | 4.8 | ATTAAGAATCTTTTTCAAT |
| Trichodesmium erythraeum IMS101 | Tery_1667 | -156 | 3.2 | TTTTATAATTTCTTTTAAA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1542 | -45 | 5.2 | ATTGAGAATTATTGTAAAT |
| Thermosynechococcus elongatus BP-1 | null | -121 | 5.5 | AATGCTATTAATTCTCAAT |
|
Position: -66
Score: 3.3 Sequence: GTTGCTAATTCTCTCCATT
Position: -7
Score: 3.5 Sequence: TTCGCGCATGATTCGCAGT
Locus tag: N9414_00680
|
||||
| N9414_00680 | -66 | 3.3 | GTTGCTAATTCTCTCCATT | |
| -7 | 3.5 | TTCGCGCATGATTCGCAGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A2351 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2351 | -216 | 2.9 | TTTATTATTGTTTTTTAGT |
| Cyanothece sp. ATCC 51142 | cce_3809 | -132 | 3.2 | GTTTTTATTTTCTGTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_2575 | -247 | 3.1 | ATTTCTCCTTATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_2644 | -122 | 4.2 | AATTAGATTAATTTTGAAT |
|
Position: -137
Score: 3.8 Sequence: ATTAGAAAAACTAATCATT
Locus tag: N9414_03855
|
||||
| N9414_03855 | -137 | 3.8 | ATTAGAAAAACTAATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbA | ||||
| Ortholog function: photosystem II, reaction center protein | ||||
| Nostoc sp. PCC 7120 | alr3727 | -105 | 3.7 | TTTAGTAATATTAATTAAT |
| Nostoc sp. PCC 7120 | alr4592 | -28 | 4.1 | ATAAATAATTAATCGCAAT |
|
Position: -34
Score: 3.2 Sequence: TTTTAGTAAAATTTTAGAT
Position: -17
Score: 3.2 Sequence: ATTGGAGATTTAAATAAAT
Locus tag: N9414_03141
|
||||
| N9414_03141 | -34 | 3.2 | TTTTAGTAAAATTTTAGAT | |
| -17 | 3.2 | ATTGGAGATTTAAATAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: all2367 | ||||
| Ortholog function: Predicted thioredoxin | ||||
| Nostoc sp. PCC 7120 | all2367 | -181 | 3.2 | TATTGTAATATCTTTTAAT |
|
Position: -176
Score: 3.3 Sequence: AATGACTAAATCAAGAATT
Position: -157
Score: 3.2 Sequence: TAGTGGAAAAATTAACAAT
Position: -147
Score: 3.3 Sequence: ATTAACAATATGTGTTTAT
Position: -131
Score: 3 Sequence: TATAATTATGAGAGTCAGT
Position: -125
Score: 3.4 Sequence: TATGAGAGTCAGTAAAAAT
Position: -60
Score: 3.2 Sequence: CTGTAAAAGGTTTATCTAT
Position: -16
Score: 3.7 Sequence: TTGGAGATTCCTTCTCATG
Locus tag: N9414_16409
|
||||
| N9414_16409 | -176 | 3.3 | AATGACTAAATCAAGAATT | |
| -157 | 3.2 | TAGTGGAAAAATTAACAAT | ||
| -147 | 3.3 | ATTAACAATATGTGTTTAT | ||
| -131 | 3 | TATAATTATGAGAGTCAGT | ||
| -125 | 3.4 | TATGAGAGTCAGTAAAAAT | ||
| -60 | 3.2 | CTGTAAAAGGTTTATCTAT | ||
| -16 | 3.7 | TTGGAGATTCCTTCTCATG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -303
Score: 3 Sequence: TTTGAACTAAGTTGTAGAT
Locus tag: N9414_03583
|
||||
| N9414_03583 | -303 | 3 | TTTGAACTAAGTTGTAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: apcF | ||||
| Ortholog function: Allophycocyanin, beta subunit | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1631 | -257 | 3.3 | TTTTATTATTTTTTTTAAA |
| Cyanothece sp. ATCC 51142 | cce_1944 | -151 | 4.4 | ATTGCTAAAATCTATAATT |
| Cyanothece sp. PCC 7425 | Cyan7425_1838 | -245 | 3 | TTTTATATTATCTTTTAAC |
| Thermosynechococcus elongatus BP-1 | null | -157 | 3.1 | AATTATGAACTTTTGTAAT |
|
Position: -129
Score: 3.1 Sequence: AATGAGTACATAACTAATA
Position: -59
Score: 2.9 Sequence: ATTCATATATTTAATTTTA
Position: -51
Score: 3 Sequence: ATTTAATTTTATTCTAACC
Locus tag: N9414_15637
|
||||
| N9414_15637 | -129 | 3.1 | AATGAGTACATAACTAATA | |
| -59 | 2.9 | ATTCATATATTTAATTTTA | ||
| -51 | 3 | ATTTAATTTTATTCTAACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifJ | ||||
| Ortholog function: Pyruvate-flavodoxin oxidoreductase | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1443 | -165 | 2.2 | TTTTCTTATAACTTTTAGC |
| Cyanothece sp. PCC 8801 | PCC8801_3918 | -67 | 3.4 | TTTGTCAATAATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_38140 | -292 | 3.9 | ATTCTGAATATTAATTAAT |
| Nostoc sp. PCC 7120 | alr2803 | -92 | 3.8 | ATTTTTAATCAGTATTAAT |
|
Position: -220
Score: 3.5 Sequence: GATGATCAAGATAATTTTT
Locus tag: N9414_08123
|
||||
| N9414_08123 | -220 | 3.5 | GATGATCAAGATAATTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sigC | ||||
| Ortholog function: RNA polymerase sigma-subunit | ||||
| Nostoc sp. PCC 7120 | all1692 | -320 | 3.5 | AATAAACATAATTTTTACT |
|
Position: -13
Score: 3.2 Sequence: TTTAGTAACCATCATGAAT
Position: 3
Score: 3.5 Sequence: AATGACAGTTATATCAAAT
Locus tag: N9414_19437
|
||||
| N9414_19437 | -13 | 3.2 | TTTAGTAACCATCATGAAT | |
| 3 | 3.5 | AATGACAGTTATATCAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fecB | ||||
| Ortholog function: Fe(3+) dicitrate ABC transport system, substrate-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0102 | -46 | 3.2 | ATTAAGAACTTTTTGAAGT |
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0005 | -38 | 4.6 | TTTGAGAATTATTTTTAGT |
| Synechocystis sp. PCC 6803 | slr1492 | -86 | 4.1 | TTTGAGAATTAGTTGCAGT |
| Cyanothece sp. PCC 7425 | Cyan7425_2440 | -66 | 5.1 | ATTGAGAGTATTTCTTATT |
| Nostoc sp. PCC 7120 | alr2627 | -106 | 4.7 | TTTGATATTAATTACTAAT |
|
Position: -322
Score: 3.7 Sequence: TCTGATATTAATAATAAGT
Position: -319
Score: 3.3 Sequence: GATATTAATAATAAGTAAT
Position: -297
Score: 2.9 Sequence: TTTGTGTTTAATAGCTAAT
Position: -246
Score: 3.6 Sequence: AATGTGATAAGTTAAGAAT
Locus tag: N9414_01999
|
||||
| N9414_01999 | -322 | 3.7 | TCTGATATTAATAATAAGT | |
| -319 | 3.3 | GATATTAATAATAAGTAAT | ||
| -297 | 2.9 | TTTGTGTTTAATAGCTAAT | ||
| -246 | 3.6 | AATGTGATAAGTTAAGAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -315
Score: 3.3 Sequence: CATGAAAACTATATACAAA
Position: -291
Score: 3 Sequence: ATACAGTTATTTTGTCTTT
Position: -248
Score: 3.6 Sequence: AACTAAAAATTTAATTAAT
Position: -231
Score: 3.1 Sequence: ATTGCTTTTTTAAGCCAAT
Position: -221
Score: 3.4 Sequence: TAAGCCAATTAATAGTATT
Position: -192
Score: 3.1 Sequence: AAAATTAAACATAATCTTT
Position: -190
Score: 3.1 Sequence: AATTAAACATAATCTTTTT
Position: -108
Score: 3 Sequence: TTTGGACAATAATGACAAT
Position: -98
Score: 3 Sequence: AATGACAATCACACAGATC
Position: -37
Score: 3 Sequence: CACGAGTTTGACAAACAAT
Position: -30
Score: 3 Sequence: TTGACAAACAATTATCAGA
Locus tag: N9414_12963
|
||||
| N9414_12963 | -315 | 3.3 | CATGAAAACTATATACAAA | |
| -291 | 3 | ATACAGTTATTTTGTCTTT | ||
| -248 | 3.6 | AACTAAAAATTTAATTAAT | ||
| -231 | 3.1 | ATTGCTTTTTTAAGCCAAT | ||
| -221 | 3.4 | TAAGCCAATTAATAGTATT | ||
| -192 | 3.1 | AAAATTAAACATAATCTTT | ||
| -190 | 3.1 | AATTAAACATAATCTTTTT | ||
| -108 | 3 | TTTGGACAATAATGACAAT | ||
| -98 | 3 | AATGACAATCACACAGATC | ||
| -37 | 3 | CACGAGTTTGACAAACAAT | ||
| -30 | 3 | TTGACAAACAATTATCAGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlL | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2347 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Synechocystis sp. PCC 6803 | slr0749 | -173 | 3.3 | ATTTTATTTTTGTCTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0791 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16230 | -150 | 2.8 | ATTTATATAATTTTTAAGC |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -7
Score: 3.1 Sequence: AATTAAAATGACGATCGCT
Locus tag: N9414_12973
|
||||
| N9414_12973 | -7 | 3.1 | AATTAAAATGACGATCGCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlN | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, subunit N | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2345 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Cyanothece sp. ATCC 51142 | cce_4534 | -118 | 3.7 | TTTGAGTTTTATTTAAAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0789 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16250 | -107 | 2.8 | ATTAAGTAATTCTTTATAT |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -330
Score: 3.8 Sequence: AGCTAAATTCTTTCTCAAT
Position: -202
Score: 4.9 Sequence: ATTTCAAAATATTCTCATT
Position: -53
Score: 3.7 Sequence: TATGTAAAAGATAAGCAGT
Locus tag: N9414_09771
|
||||
| N9414_09771 | -330 | 3.8 | AGCTAAATTCTTTCTCAAT | |
| -202 | 4.9 | ATTTCAAAATATTCTCATT | ||
| -53 | 3.7 | TATGTAAAAGATAAGCAGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dpsA | ||||
| Ortholog function: Nutrient stress-induced DNA-binding protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0479 | -144 | 4.7 | GATGCAATATATTCTCAAT |
| Nostoc sp. PCC 7120 | alr3808 | -204 | 3.5 | GTTTAGAAATTATTGCAAT |