Propagation of Crp regulog to Cyanothece sp. PCC 7822
| Source regulog: | Crp - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Cyanothece sp. PCC 7822 |
| Orthologous TF(s) | Cyan7822DRAFT_1304 |
| Regulated genes | 19 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: 12
Score: 4.3 Sequence: AGTGATAAAAGTCCAA
Locus tag: Cyan7822DRAFT_1276
|
||||
| Cyan7822DRAFT_1276 | 12 | 4.3 | AGTGATAAAAGTCCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifK2 | ||||
| Ortholog function: Nitrogen fixation protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0567 | 12 | 4.2 | ACTGATAATAATCCCA |
| Cyanothece sp. PCC 8801 | PCC8801_1792 | 21 | 4.3 | AGTGACAATGTTCATA |
|
Position: 21
Score: 4.4 Sequence: AGTGATAATATTCATG
Locus tag: Cyan7822DRAFT_1278
|
||||
| Cyan7822DRAFT_1278 | 21 | 4.4 | AGTGATAATATTCATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifX | ||||
| Ortholog function: Nitrogen fixation protein | ||||
| Cyanothece sp. PCC 8801 | PCC8801_1790 | 21 | 4.3 | AGTGACAATGTTCATA |
| Nostoc sp. PCC 7120 | all1436 | 21 | 4.3 | AGTGACAGAATTCATA |
| Trichodesmium erythraeum IMS101 | Tery_4140 | 21 | 4.3 | ACTGATTTTATTCATA |
|
Position: -54
Score: 3.6 Sequence: ATTGATGAAAGGCACG
Position: -23
Score: 3.6 Sequence: ACTCATAAGAATCACG
Locus tag: Cyan7822DRAFT_1288
|
||||
| Cyan7822DRAFT_1288 | -54 | 3.6 | ATTGATGAAAGGCACG | |
| -23 | 3.6 | ACTCATAAGAATCACG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifB | ||||
| Ortholog function: FeMo nitrogenase cofactor biosynthesis protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0554 | -123 | 4 | GGTGGTATAAATGACA |
| Cyanothece sp. PCC 7425 | Cyan7425_2361 | -40 | 3.9 | ACTGTTATAAAGCACC |
| Nostoc sp. PCC 7120 | all1517 | -299 | 3.1 | ACTGCTATAAATCTTA |
| Trichodesmium erythraeum IMS101 | Tery_4133 | -356 | 3.7 | TATGACTTATAGCATG |
|
Position: -76
Score: 4.9 Sequence: TGTGATCTAGATCACT
Locus tag: Cyan7822DRAFT_1570
|
||||
| Cyan7822DRAFT_1570 | -76 | 4.9 | TGTGATCTAGATCACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: murF | ||||
| Ortholog function: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2693 | -92 | 4.1 | GGTGACAAATATCACT |
| Synechocystis sp. PCC 6803 | slr1351 | -101 | 5 | GGTGATCTAGATCACA |
| Cyanothece sp. ATCC 51142 | cce_4424 | -83 | 5.1 | TGTGATCTTGATCACA |
| Cyanothece sp. PCC 8801 | PCC8801_2372 | -74 | 4.8 | AGTGATCTGGGTCACA |
| Synechococcus sp. JA-3-3Ab | CYA_0077 | -32 | 3.8 | ATTGACTAGAGTCATG |
| Thermosynechococcus elongatus BP-1 | null | 3 | 4.2 | ATTGATCTAAAACAAC |
|
Position: -21
Score: 3.7 Sequence: TATGGCCAGAATCATG
Locus tag: Cyan7822DRAFT_3777
|
||||
| Cyan7822DRAFT_3777 | -21 | 3.7 | TATGGCCAGAATCATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxB | ||||
| Ortholog function: Cytochrome c oxidase subunit 2 (EC 1.9.3.1) | ||||
| Cyanothece sp. ATCC 51142 | cce_1977 | -78 | 3.7 | TGTGATAAAAAAGCCA |
|
Position: -53
Score: 3 Sequence: AACGATTAATAACAAA
Locus tag: Cyan7822DRAFT_3779
|
||||
| Cyan7822DRAFT_3779 | -53 | 3 | AACGATTAATAACAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxC | ||||
| Ortholog function: Cytochrome c oxidase subunit 3 (EC 1.9.3.1) | ||||
| Cyanothece sp. ATCC 51142 | cce_1975 | -78 | 3.7 | TGTGATAAAAAAGCCA |
| Nostoc sp. PCC 7120 | alr2516 | -222 | 3.1 | TCTGGAATAATTCCCC |