Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Cyanothece sp. PCC 7822

Reference regulog properties
Source regulog: LexA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. PCC 7822
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 26 sites [see more]
Predicted regulatory interactions in Cyanothece sp. PCC 7822
Locus tag Position Score Sequence
Position: -15
Score: 4
Sequence: AAAATAAATGTACT
Position: -7
Score: 4.4
Sequence: TGTACTGATGTACT
Locus tag: Cyan7822DRAFT_4550
Cyan7822DRAFT_4550 -15 4 AAAATAAATGTACT
-7 4.4 TGTACTGATGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ssb
Ortholog function: single-stranded DNA-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0119 -25 3.9 AGAACAGTTGTATG
Cyanothece sp. PCC 7425 Cyan7425_1469 -18 4.1 AGTACAGGTAAACT
Microcystis aeruginosa NIES-843 MAE_39060 -33 4.3 CATACTATTGTACT
Nostoc sp. PCC 7120 alr0088 -28 5.1 AGTACTTATGTACT
Position: -330
Score: 4.1
Sequence: GGTACAGCTATTTT
Position: -48
Score: 4
Sequence: ACTACACTTGTAAT
Position: -37
Score: 3.7
Sequence: AATACTGATATTGT
Locus tag: Cyan7822DRAFT_4673
Cyan7822DRAFT_4673 -330 4.1 GGTACAGCTATTTT
-48 4 ACTACACTTGTAAT
-37 3.7 AATACTGATATTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0856
Ortholog function: Conserved hypothetical protein, no COGs
Cyanothece sp. ATCC 51142 cce_3128 -34 3.8 ACTACACTTATATT
Cyanothece sp. PCC 8801 PCC8801_1259 -47 4.4 ACTACACTTGTATT
Cyanothece sp. PCC 7425 Cyan7425_4886 -52 4.4 ACTACACTTGTATT
Nostoc sp. PCC 7120 all0854 -46 4.4 ACTACACTTGTATT
Synechococcus sp. JA-3-3Ab CYA_0805 -39 3.7 GCTACAGGAGTAGT
Gloeobacter violaceus PCC 7421 gll1134 -45 4.2 ACTACGGCTATACT
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