Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Synechococcus sp. WH 5701

Reference regulog properties
Source regulog: LexA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus sp. WH 5701
Orthologous TF(s) WH5701_14696
Regulated genes 2
Built upon 26 sites [see more]
Predicted regulatory interactions in Synechococcus sp. WH 5701
Locus tag Position Score Sequence
Position: -171
Score: 4.7
Sequence: CGTACGCCTGTACT
Locus tag: WH5701_05700
WH5701_05700 -171 4.7 CGTACGCCTGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Synechococcus sp. PCC 7002 SYNPCC7002_A0426 -64 4.3 AGTACGATTGAACT
Cyanothece sp. ATCC 51142 cce_4639 -47 4.8 AATACTTTTGTACT
Cyanothece sp. PCC 7425 Cyan7425_1671 -39 4.5 AGTACGGATATACT
Microcystis aeruginosa NIES-843 MAE_16070 -40 4.6 CATACTGCTGTACT
Nostoc sp. PCC 7120 all3272 -66 4.6 AGTATATCTGTTCT
Prochlorococcus marinus str. MIT 9313 PMT1727 -145 4.9 GGTACGTCTGTACT
Synechococcus sp. WH 8102 SYNW2062 -78 4.7 CGTACGCCTGTACT
Position: -41
Score: 4.6
Sequence: AGTACATCTGCACT
Locus tag: WH5701_10629
WH5701_10629 -41 4.6 AGTACATCTGCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: umuD
Ortholog function: DNA polymerase V, subunit D
Prochlorococcus marinus str. MIT 9313 PMT0635 -20 4.4 GGAACGGGTGTACT
Synechococcus sp. WH 8102 SYNW1044 -39 4.6 AATACATCAGTACT
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