Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Arthrospira maxima CS-328

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Arthrospira maxima CS-328
Orthologous TF(s) AmaxDRAFT_3171
Regulated genes 19
Built upon 167 sites [see more]
Predicted regulatory interactions in Arthrospira maxima CS-328
Locus tag Position Score Sequence
Position: -298
Score: 3.6
Sequence: GATCATAAAATTTAACACT
Position: -162
Score: 4.9
Sequence: TATGGTAATAATACTCAAT
Locus tag: AmaxDRAFT_0429
AmaxDRAFT_0429 -298 3.6 GATCATAAAATTTAACACT
-162 4.9 TATGGTAATAATACTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
Position: -12
Score: 3.1
Sequence: GATTAGAATTTCATGCAAT
Position: 5
Score: 3.1
Sequence: ATTTACATCAGTTGACAAG
Locus tag: AmaxDRAFT_0569
AmaxDRAFT_0569 -12 3.1 GATTAGAATTTCATGCAAT
5 3.1 ATTTACATCAGTTGACAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase, subunit III
Cyanothece sp. ATCC 51142 cce_1975 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0569 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22950 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr2516 -190 3 AgTTAaAAagtTaaTaAgT
Position: -10
Score: 3.4
Sequence: TGTGAGACTCATGACCAAT
Position: -1
Score: 3.4
Sequence: CATGACCAATACTGTCTAT
Locus tag: AmaxDRAFT_0572
AmaxDRAFT_0572 -10 3.4 TGTGAGACTCATGACCAAT
-1 3.4 CATGACCAATACTGTCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: -261
Score: 3.7
Sequence: TTAAATAATGGTAATCTAT
Position: -255
Score: 3.1
Sequence: AATGGTAATCTATTCAATT
Position: -167
Score: 3.1
Sequence: AGAGCAAAAAATTTTTTTT
Position: -152
Score: 3.5
Sequence: TTTTGTAATATTTCTTAAA
Position: -151
Score: 3
Sequence: TTTGTAATATTTCTTAAAT
Position: -78
Score: 3.5
Sequence: TCCGTAAAAAATTATCATA
Position: -72
Score: 3.3
Sequence: AAAAATTATCATAATCAAC
Position: -60
Score: 3.1
Sequence: AATCAACACAATTTTTGAT
Position: -47
Score: 4.4
Sequence: TTTGATAAAATTTAACATA
Locus tag: AmaxDRAFT_0862
AmaxDRAFT_0862 -261 3.7 TTAAATAATGGTAATCTAT
-255 3.1 AATGGTAATCTATTCAATT
-167 3.1 AGAGCAAAAAATTTTTTTT
-152 3.5 TTTTGTAATATTTCTTAAA
-151 3 TTTGTAATATTTCTTAAAT
-78 3.5 TCCGTAAAAAATTATCATA
-72 3.3 AAAAATTATCATAATCAAC
-60 3.1 AATCAACACAATTTTTGAT
-47 4.4 TTTGATAAAATTTAACATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0913
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0913 -146 2.2 TTTTTACAACATTTTTAAA
-68 3.8 AATGAGAAAATTTTGATAT
Synechocystis sp. PCC 6803 sll1911 -59 4.2 GTTGTTAAAATTTAACAAT
Cyanothece sp. ATCC 51142 cce_0019 -75 3.1 TTTTTTAATATTTTTTGAT
Cyanothece sp. PCC 8801 PCC8801_2812 -67 4.4 TATGATAAAATTTATTAAA
Trichodesmium erythraeum IMS101 Tery_4773 -64 2.4 TTTATGAAATATTTATGAT
Position: -104
Score: 3
Sequence: GTTGATTATGTCTAAATTT
Locus tag: AmaxDRAFT_0880
AmaxDRAFT_0880 -104 3 GTTGATTATGTCTAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase, subunit N
Synechococcus sp. PCC 7002 SYNPCC7002_A2345 -126 3.6 TTTTATAAAAACTCTAAGT
Cyanothece sp. ATCC 51142 cce_4534 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0789 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16250 -107 2.8 ATTAAGTAATTCTTTATAT
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -345
Score: 3
Sequence: GTTTATTGTAACTCTTTTT
Position: -341
Score: 3.1
Sequence: ATTGTAACTCTTTTTATAT
Position: -307
Score: 3.9
Sequence: TTTGATAAAAGTTCATAAA
Position: -267
Score: 3
Sequence: AACGATAAAAAATTCATAT
Position: -205
Score: 3.8
Sequence: ATTGATAGCCTCTTTCCAT
Position: -186
Score: 3.7
Sequence: TTGGGGAAAATTCATCAAT
Position: -177
Score: 3.6
Sequence: ATTCATCAATAATGGCAAT
Position: -173
Score: 3.4
Sequence: ATCAATAATGGCAATCAAG
Locus tag: AmaxDRAFT_0882
AmaxDRAFT_0882 -345 3 GTTTATTGTAACTCTTTTT
-341 3.1 ATTGTAACTCTTTTTATAT
-307 3.9 TTTGATAAAAGTTCATAAA
-267 3 AACGATAAAAAATTCATAT
-205 3.8 ATTGATAGCCTCTTTCCAT
-186 3.7 TTGGGGAAAATTCATCAAT
-177 3.6 ATTCATCAATAATGGCAAT
-173 3.4 ATCAATAATGGCAATCAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -160
Score: 3.7
Sequence: TACTAAAAATGTTCTTAAT
Position: -159
Score: 3.1
Sequence: ACTAAAAATGTTCTTAATT
Position: -153
Score: 3.4
Sequence: AATGTTCTTAATTCAGAAT
Position: -143
Score: 5
Sequence: ATTCAGAATAATTCTGATT
Position: -118
Score: 3.7
Sequence: TTTGTAAATGAGTATTTAT
Position: -112
Score: 3.9
Sequence: AATGAGTATTTATAACTAT
Position: -105
Score: 3.2
Sequence: ATTTATAACTATTTTAAGA
Position: -93
Score: 4
Sequence: TTTAAGAATGAGTCTGATT
Position: -87
Score: 2.9
Sequence: AATGAGTCTGATTTCAAGT
Locus tag: AmaxDRAFT_2296
AmaxDRAFT_2296 -160 3.7 TACTAAAAATGTTCTTAAT
-159 3.1 ACTAAAAATGTTCTTAATT
-153 3.4 AATGTTCTTAATTCAGAAT
-143 5 ATTCAGAATAATTCTGATT
-118 3.7 TTTGTAAATGAGTATTTAT
-112 3.9 AATGAGTATTTATAACTAT
-105 3.2 ATTTATAACTATTTTAAGA
-93 4 TTTAAGAATGAGTCTGATT
-87 2.9 AATGAGTCTGATTTCAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: Predicted peroxide stress response regulator, Fur family
Synechocystis sp. PCC 6803 slr1738 -194 3 ATTAATATTTTTTTTATAA
Cyanothece sp. PCC 7425 Cyan7425_1597 -88 4.9 TTTGAGAATTATACTAAAT
Position: -181
Score: 3.4
Sequence: AATGACAAAATTTAGCGCG
Locus tag: AmaxDRAFT_2389
AmaxDRAFT_2389 -181 3.4 AATGACAAAATTTAGCGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate-flavodoxin oxidoreductase
Synechococcus sp. PCC 7002 SYNPCC7002_A1443 -165 2.2 TTTTCTTATAACTTTTAGC
Cyanothece sp. PCC 8801 PCC8801_3918 -67 3.4 TTTGTCAATAATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_38140 -292 3.9 ATTCTGAATATTAATTAAT
Nostoc sp. PCC 7120 alr2803 -92 3.8 ATTTTTAATCAGTATTAAT
Position: -213
Score: 3.4
Sequence: ATTGATATACCGACTAATT
Locus tag: AmaxDRAFT_3170
AmaxDRAFT_3170 -213 3.4 ATTGATATACCGACTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigC
Ortholog function: RNA polymerase sigma-subunit
Nostoc sp. PCC 7120 all1692 -320 3.5 AATAAACATAATTTTTACT
Position: -91
Score: 4.1
Sequence: ATCAGAATTGATTATCAAT
Position: -42
Score: 3.8
Sequence: CTTGTGTATCATTGTCAGT
Locus tag: AmaxDRAFT_3171
AmaxDRAFT_3171 -91 4.1 ATCAGAATTGATTATCAAT
-42 3.8 CTTGTGTATCATTGTCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Ferric uptake regulator, Fur family
Synechococcus sp. PCC 7002 SYNPCC7002_A1649 -88 3.5 GTTAGTATTTATTTGCAAT
Cyanothece sp. ATCC 51142 cce_2330 -96 5.1 GTTGCTAATTATTTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0870 -97 4.6 GTTGCAAATTATTTGCAAT
Trichodesmium erythraeum IMS101 Tery_1958 -44 4.7 ATTGTGTATCATTGTCAAT
Thermosynechococcus elongatus BP-1 null -59 4.4 CATTGTAATTATTCTCAAT
Position: -79
Score: 3.5
Sequence: AATGTGAACTGTAATATAT
Locus tag: AmaxDRAFT_3254
AmaxDRAFT_3254 -79 3.5 AATGTGAACTGTAATATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -90
Score: 4.2
Sequence: ATTGATTAAGTTTTGTATT
Position: 14
Score: 3.1
Sequence: AACGAGCCTGATTAAAAAT
Locus tag: AmaxDRAFT_3348
AmaxDRAFT_3348 -90 4.2 ATTGATTAAGTTTTGTATT
14 3.1 AACGAGCCTGATTAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: Allophycocyanin, beta subunit
Synechococcus sp. PCC 7002 SYNPCC7002_A1631 -257 3.3 TTTTATTATTTTTTTTAAA
Cyanothece sp. ATCC 51142 cce_1944 -151 4.4 ATTGCTAAAATCTATAATT
Cyanothece sp. PCC 7425 Cyan7425_1838 -245 3 TTTTATATTATCTTTTAAC
Thermosynechococcus elongatus BP-1 null -157 3.1 AATTATGAACTTTTGTAAT
Position: -16
Score: 3
Sequence: GATTCAAAAATTCATCATG
Position: -7
Score: 3
Sequence: ATTCATCATGGCTAACATC
Locus tag: AmaxDRAFT_3602
AmaxDRAFT_3602 -16 3 GATTCAAAAATTCATCATG
-7 3 ATTCATCATGGCTAACATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdx
Ortholog function: Predicted ferredoxin
Nostoc sp. PCC 7120 asl0884 -90 3.5 ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab CYA_0643 -92 2.8 ATTAAAAATATGATTTAAA
Position: -224
Score: 4.2
Sequence: ATTGATAATTAATACTTTT
Position: -218
Score: 3.2
Sequence: AATTAATACTTTTAGTTAT
Position: -217
Score: 3.5
Sequence: ATTAATACTTTTAGTTATT
Position: -201
Score: 3.3
Sequence: ATTCACCATATTATTGATT
Position: -198
Score: 3.1
Sequence: CACCATATTATTGATTATT
Position: -195
Score: 3.1
Sequence: CATATTATTGATTATTGAT
Position: -189
Score: 3.4
Sequence: ATTGATTATTGATAATAAA
Position: -182
Score: 3.7
Sequence: ATTGATAATAAATTTAAGC
Position: -84
Score: 4.7
Sequence: ATTGAAAGTTATTTACAAT
Position: -74
Score: 3.1
Sequence: ATTTACAATAAGGCTTAAC
Position: -50
Score: 4.2
Sequence: ATTGAGATACTTATGCAAT
Locus tag: AmaxDRAFT_4039
AmaxDRAFT_4039 -224 4.2 ATTGATAATTAATACTTTT
-218 3.2 AATTAATACTTTTAGTTAT
-217 3.5 ATTAATACTTTTAGTTATT
-201 3.3 ATTCACCATATTATTGATT
-198 3.1 CACCATATTATTGATTATT
-195 3.1 CATATTATTGATTATTGAT
-189 3.4 ATTGATTATTGATAATAAA
-182 3.7 ATTGATAATAAATTTAAGC
-84 4.7 ATTGAAAGTTATTTACAAT
-74 3.1 ATTTACAATAAGGCTTAAC
-50 4.2 ATTGAGATACTTATGCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Photosystem II chlorophyll-binding protein
Synechocystis sp. PCC 6803 sll0247 -269 2.8 ATTTCTTAATAATTTTAGT
Cyanothece sp. ATCC 51142 cce_1785 -18 4.4 ATTGCAAATCTTTTTAAAT
Cyanothece sp. PCC 7425 Cyan7425_2434 -61 4.7 ATTGAGTTTATTTCTCAAC
Nostoc sp. PCC 7120 all4001 -161 4.8 ATTAAGAATCTTTTTCAAT
Trichodesmium erythraeum IMS101 Tery_1667 -156 3.2 TTTTATAATTTCTTTTAAA
Synechococcus elongatus PCC 7942 Synpcc7942_1542 -45 5.2 ATTGAGAATTATTGTAAAT
Thermosynechococcus elongatus BP-1 null -121 5.5 AATGCTATTAATTCTCAAT
Position: -292
Score: 3.2
Sequence: TTAGGAATTCTTAATTATT
Position: -54
Score: 3.1
Sequence: TTTCAGAATCTGCAACAAT
Locus tag: AmaxDRAFT_4128
AmaxDRAFT_4128 -292 3.2 TTAGGAATTCTTAATTATT
-54 3.1 TTTCAGAATCTGCAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -158
Score: 3.4
Sequence: TCTGAGAATTTATGTTTAT
Position: -35
Score: 3.5
Sequence: ACTGGAAATCATAATTTAT
Position: -1
Score: 3.1
Sequence: TATGACAATAGCAGTCGAA
Locus tag: AmaxDRAFT_4474
AmaxDRAFT_4474 -158 3.4 TCTGAGAATTTATGTTTAT
-35 3.5 ACTGGAAATCATAATTTAT
-1 3.1 TATGACAATAGCAGTCGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -60
Score: 3.9
Sequence: GATTGGAAAGTTTATCAAT
Locus tag: AmaxDRAFT_4981
AmaxDRAFT_4981 -60 3.9 GATTGGAAAGTTTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0871 -83 5.1 GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142 cce_3801 -163 4.2 ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425 Cyan7425_3510 -105 5.3 ATTGAGAATAATTTTCAAA
-60 4 GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843 MAE_12460 -117 4.4 TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101 Tery_3222 -94 5.1 AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_1406 -81 4.2 ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab CYA_2794 -26 3.8 AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421 gll1012 -64 3.7 ATTGACAATTAATTGCAGC
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