Propagation of NtcA regulog to Arthrospira maxima CS-328

Reference regulog properties
Source regulog:	NtcA - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	2-oxoglutarate
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Arthrospira maxima CS-328
Orthologous TF(s)	AmaxDRAFT_4666
Regulated genes	29

Built upon 228 sites [see more]

Predicted regulatory interactions in *Arthrospira maxima CS-328*
	Locus tag	Position	Score	Sequence
Position: -35 Score: 3.5 Sequence: AGCAGTTTGTATTACA Locus tag: AmaxDRAFT_0569
	AmaxDRAFT_0569	-35	3.5	AGCAGTTTGTATTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
Cyanothece sp. PCC 8801	PCC8801_0569	-148	3.8	TTTATTATTTGTTACC
Microcystis aeruginosa NIES-843	MAE_22950	-141	3.8	AGTTATTTTAAATACT
Nostoc sp. PCC 7120	alr2516	-291	3.5	AGAAGTAGAAGCTACT

Position: -77 Score: 4.3 Sequence: GGTAGCAGGAGTTACA Locus tag: AmaxDRAFT_0729
	AmaxDRAFT_0729	-77	4.3	GGTAGCAGGAGTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrrA
Ortholog function: Transcriptional regulator, OmpR family
Synechococcus sp. PCC 7002	SYNPCC7002_A0496	-75	4.1	CGTAACCACGGTTACA
Synechocystis sp. PCC 6803	sll1330	-75	4.6	GGTAACTGTTGTTACA
Cyanothece sp. ATCC 51142	cce_1808	-76	4.3	CGTAGCCGATGTTACA
Cyanothece sp. PCC 8801	PCC8801_3375	-76	4.5	CGTAGCAGATGTTACA
Cyanothece sp. PCC 7425	Cyan7425_0851	-82	4.1	AGTAGCTAGAGTTACG
Nostoc sp. PCC 7120	all4312	-75	4.5	AGTAACAAAGACTACA
Trichodesmium erythraeum IMS101	Tery_0675	-89	4.7	AGTAGCTTCTGTTACA
Thermosynechococcus elongatus BP-1	tlr1330	-138	4	AGTATTATTCGTTACG

Position: -250 Score: 4 Sequence: TGTATCACGATTTACC Locus tag: AmaxDRAFT_1137
	AmaxDRAFT_1137	-250	4	TGTATCACGATTTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnB
Ortholog function: nitrogen regulatory protein P-II
Synechocystis sp. PCC 6803	ssl0707	-184	3.7	GGTACTGATTTTTACA
Nostoc sp. PCC 7120	all2319	-214	3.8	AGTTACACAGACTACA
Synechococcus elongatus PCC 7942	Synpcc7942_0321	-103	4.8	TGTAGCAGTAACTACA
Synechococcus sp. JA-3-3Ab	CYA_1508	-74	4.5	TGTATCCGTTTTTACA
Thermosynechococcus elongatus BP-1	tll0591	-80	5.1	TGTAGCTATTGCTACA

Position: -111 Score: 4.2 Sequence: TGTAGTCTTTTGTACA Position: -39 Score: 3.5 Sequence: GGTAGAATGATTTACG Locus tag: AmaxDRAFT_2046
	AmaxDRAFT_2046	-111	4.2	TGTAGTCTTTTGTACA
		-39	3.5	GGTAGAATGATTTACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: trxA
Ortholog function: Thioredoxin-1
Nostoc sp. PCC 7120	alr0052	17	3.7	AGTTACAGATTCTACT
Gloeobacter violaceus PCC 7421	gll0880	-379	3.6	TGTATCTAGAACTAGC

Position: -314 Score: 3.8 Sequence: AATAGATTTTAATACA Locus tag: AmaxDRAFT_2576
	AmaxDRAFT_2576	-314	3.8	AATAGATTTTAATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A1954
Ortholog function: putative two-component sensor histidine kinase
Cyanothece sp. PCC 8801	PCC8801_3053	-198	4.8	TGTAATCATAGTTACA
Microcystis aeruginosa NIES-843	MAE_14410	-75	3.7	TGTAAACTGGGAAACA
Nostoc sp. PCC 7120	alr3982	-250	4.6	TGTAGTGATAGCTACA
Trichodesmium erythraeum IMS101	Tery_3912	-156	4.3	TGTAGTTATGGCTACC

Position: -106 Score: 4.1 Sequence: TGTATTCACTTATACT Locus tag: AmaxDRAFT_2765
	AmaxDRAFT_2765	-106	4.1	TGTATTCACTTATACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0076
Ortholog function: hypothetical protein
Cyanothece sp. PCC 7425	Cyan7425_0729	-128	4.3	TGTAACATTTGTTATT
		-71	4.1	AGTATTGGTGGATACA
Nostoc sp. PCC 7120	asr0064	-107	3.7	CGTATAGCAAAATACA
Trichodesmium erythraeum IMS101	Tery_2891	-191	4.1	TGTAATTTAGACAACA
		-110	4.6	TGTAACTATATATACT
Thermosynechococcus elongatus BP-1	tsr2448	-63	4.1	AGTATTGGATATTACA

Position: -112 Score: 4.4 Sequence: TGTAGCACTCAATACA Locus tag: AmaxDRAFT_3347
	AmaxDRAFT_3347	-112	4.4	TGTAGCACTCAATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: glutamine synthetase, type I
Synechococcus sp. PCC 7002	SYNPCC7002_A1630	-125	3.5	TGTgACccAgacTACA
Synechocystis sp. PCC 6803	slr1756	-98	4.3	GGTAGCGAAAAATACA
Cyanothece sp. ATCC 51142	cce_4432	-89	4.5	AGTATCCAATTATACA
		-30	4	TGTATATATTGAAACC
Cyanothece sp. PCC 8801	PCC8801_0808	-92	4	CGTATCATGGTATACA
Cyanothece sp. PCC 7425	Cyan7425_1839	-221	4.9	TGTAACTCATGATACA
Microcystis aeruginosa NIES-843	MAE_19270	-92	4.7	TGTATCgaAaaATACA
Nostoc sp. PCC 7120	alr2328	-142	4.8	TGTAACAAAGACTACA
Trichodesmium erythraeum IMS101	Tery_3834	-250	4	CGTAACACCCGATACA
Synechococcus elongatus PCC 7942	Synpcc7942_2156	-194	4.8	TGTATCAgcTGTTACA
Prochlorococcus marinus str. MIT 9313	PMT0601	-79	4.2	GGTACCTGTTGCTACA
Synechococcus sp. JA-3-3Ab	CYA_1363	-138	4.3	CGTATCAGAAACTACA
Gloeobacter violaceus PCC 7421	gvip146	-116	4	CGTATCTCAGACTACA

Position: -77 Score: 4.4 Sequence: TGTATTGAGTGCTACA Locus tag: AmaxDRAFT_3348
	AmaxDRAFT_3348	-77	4.4	TGTATTGAGTGCTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: phycobilisome core component
Cyanothece sp. ATCC 51142	cce_1944	-177	3.8	TGTGATAAGAAATACA
Cyanothece sp. PCC 8801	PCC8801_0807	-251	4	TGTATACCATGATACG
Cyanothece sp. PCC 7425	Cyan7425_1838	-281	4.9	TGTATCATGAGTTACA
Nostoc sp. PCC 7120	all2327	-233	4.8	TGTAGTCTTTGTTACA
Synechococcus elongatus PCC 7942	Synpcc7942_2158	-214	4.8	TGTAACAGCTGATACA

Position: -329 Score: 3.4 Sequence: TGTAATCAGATTTAAA Locus tag: AmaxDRAFT_3478
	AmaxDRAFT_3478	-329	3.4	TGTAATCAGATTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltS
Ortholog function: Glutamate synthase (NADPH dependent) large chain (EC 1.4.1.13)
Nostoc sp. PCC 7120	alr4344	-265	3.5	TGGAAAAATTAAAACA
Trichodesmium erythraeum IMS101	Tery_0466	-228	4.2	TGTATCCTAGGCAACA

Position: -30 Score: 3.9 Sequence: GGTATTCAAAAATACT Locus tag: AmaxDRAFT_3713
	AmaxDRAFT_3713	-30	3.9	GGTATTCAAAAATACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirA
Ortholog function: Nitrite reductase, ferredoxin dependent
Synechococcus sp. PCC 7002	SYNPCC7002_A1827	-111	4	CGTAGTTAACACTACA
Synechocystis sp. PCC 6803	slr0898	-74	4.7	TGTAATTTACGTTACA
Cyanothece sp. ATCC 51142	cce_1223	-76	4.7	TGTTACATTAGCTACA
Cyanothece sp. PCC 8801	PCC8801_2468	-75	4.6	TGTTACAATTAATACA
Cyanothece sp. PCC 7425	Cyan7425_4573	-123	4.5	TGTAACTTAATATACC
Microcystis aeruginosa NIES-843	MAE_18410	-190	4.1	TGTTACAGACAATACA
Trichodesmium erythraeum IMS101	Tery_1068	-276	3.8	TGTATTTTTATATAGT
		-199	4.1	TGTTATATAAGCTACG
Synechococcus elongatus PCC 7942	Synpcc7942_1240	-220	4.9	TGTAGCAATTGCTACT
		-149	4.3	AGTATCAATGATTACT
		-80	4.4	TGTAGTTTCTGTTACC
Synechococcus sp. JA-3-3Ab	CYA_0612	-72	3.9	TGTAACTGCCAATACC
Gloeobacter violaceus PCC 7421	gvip212	-146	4	TGTATCTGGGGTTACG
Thermosynechococcus elongatus BP-1	tlr1349	-82	4.6	AGTAGCAAAATTTACA

Position: -163 Score: 3.8 Sequence: CGTAAAATAAAAAACA Position: -137 Score: 4.3 Sequence: TGTAGTTGCCGATACA Locus tag: AmaxDRAFT_3857
	AmaxDRAFT_3857	-163	3.8	CGTAAAATAAAAAACA
		-137	4.3	TGTAGTTGCCGATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrtA
Ortholog function: Nitrate/nitrite ABC transporter, substrate-binding protein
Synechocystis sp. PCC 6803	sll1450	-96	3.9	AGTTACAAACTATACA
Cyanothece sp. PCC 8801	PCC8801_4396	-184	4.6	TGTAGCAAATAATACG
		-106	3.9	AGTATTTATAGACACA
Cyanothece sp. PCC 7425	Cyan7425_4572	-123	4.5	TGTAACTTAATATACC
Microcystis aeruginosa NIES-843	MAE_14800	-177	4.2	TGTAACAATCTATACG
Synechococcus elongatus PCC 7942	Synpcc7942_1239	-220	4.9	TGTAGCAATTGCTACT
		-149	4.3	AGTATCAATGATTACT
		-80	4.4	TGTAGTTTCTGTTACC
Synechococcus sp. JA-3-3Ab	CYA_0613	-72	3.9	TGTAACTGCCAATACC
Thermosynechococcus elongatus BP-1	tlr1350	-82	4.6	AGTAGCAAAATTTACA

Position: -350 Score: 4 Sequence: TGTATTGCAGTATACA Locus tag: AmaxDRAFT_4502
	AmaxDRAFT_4502	-350	4	TGTATTGCAGTATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: amt1
Ortholog function: ammonium transporter
Synechococcus sp. PCC 7002	SYNPCC7002_A2208	-52	3.7	GGTTACTTCTGCTACC
Synechocystis sp. PCC 6803	sll0108	-189	4	AGTAGTAAATCATACA
		-18	4.4	TGTAGATTAAAGTACA
Cyanothece sp. ATCC 51142	cce_3261	-152	3.5	TGTtAaggtTGTaACA
Cyanothece sp. PCC 8801	PCC8801_1229	-264	5	TGTATTTTTTGATACA
		-229	4.1	AGTAATAAAAAAAACA
Microcystis aeruginosa NIES-843	MAE_40010	-213	4.6	TGTATCAACGAATACA
Trichodesmium erythraeum IMS101	Tery_4477	-83	4.9	AGTAGCATTTGATACA
Synechococcus elongatus PCC 7942	Synpcc7942_0442	-151	4.1	TGTTACATCGATTACA
Prochlorococcus marinus str. MIT 9313	PMT1853	-160	3.8	TGTAACAAAATGAACT
Synechococcus sp. WH 8102	SYNW0253	-100	4.2	TGTATCAATTAACACA
Thermosynechococcus elongatus BP-1	amt1	-190	4.4	TGTATAACGTGATACA

Position: -273 Score: 3.6 Sequence: ACTTACAAATACTACA Locus tag: AmaxDRAFT_4514
	AmaxDRAFT_4514	-273	3.6	ACTTACAAATACTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: icd
Ortholog function: Isocitrate dehydrogenase (NADP+)
Microcystis aeruginosa NIES-843	MAE_62530	-30	3.7	CGTATAGATAAATACT
Nostoc sp. PCC 7120	alr1827	-6	3.4	TGAAATATGTACAACA

Position: -89 Score: 3.3 Sequence: TGTATCTGTACCTGCA Locus tag: AmaxDRAFT_4747
	AmaxDRAFT_4747	-89	3.3	TGTATCTGTACCTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbZ
Ortholog function: Photosystem II reaction center protein Z
Cyanothece sp. ATCC 51142	cce_3633	-20	4.2	TGTAACTGTATTAACA
Nostoc sp. PCC 7120	all1258	-161	3.4	TGTTACAAAAATTAGG

Position: -84 Score: 4.5 Sequence: TGTAGCAATTTTTACC Locus tag: AmaxDRAFT_4787
	AmaxDRAFT_4787	-84	4.5	TGTAGCAATTTTTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ntcB
Ortholog function: Nitrogen assimilation transcriptional activator, LysR family
Synechococcus sp. PCC 7002	SYNPCC7002_A1632	-87	3.9	TGTAACATccGgaACA
Cyanothece sp. ATCC 51142	cce_0198	-73	4.2	AGTATCAATTTCTACG
Cyanothece sp. PCC 8801	PCC8801_2329	-80	4.7	TGTATCAAATTCTACT
Cyanothece sp. PCC 7425	Cyan7425_1599	-78	4.6	TGTATCACTATCTACA
Microcystis aeruginosa NIES-843	MAE_09380	-80	4.1	gGTAgCAatTtcTACc
Nostoc sp. PCC 7120	all0602	-80	4.5	TGTAACAAAATCTACC
		-21	4.7	TGTAATTAAGGCTACA
Trichodesmium erythraeum IMS101	Tery_4333	-27	4	TGTATAAAATAACACA
Synechococcus elongatus PCC 7942	Synpcc7942_1242	-153	4.3	AGTAATCATTGATACT
		-82	4.9	AGTAGCAATTGCTACA
Synechococcus sp. JA-3-3Ab	CYA_0984	-89	4.2	TGTAACGGTGTTTACA
Gloeobacter violaceus PCC 7421	gvip213	-46	4	CGTAACCCCAGATACA
Thermosynechococcus elongatus BP-1	null	-122	3.9	TGTATCAATCAACACA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NtcA regulog to Arthrospira maxima CS-328

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --