Propagation of Fur regulog to Thermosynechococcus elongatus BP-1
| Source regulog: | Fur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Thermosynechococcus elongatus BP-1 |
| Orthologous TF(s) | tll0048 (deprecated) |
| Regulated genes | 18 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -92
Score: 3.6 Sequence: ATTGCAACTCATTGGCAAA
Position: -59
Score: 4.4 Sequence: CATTGTAATTATTCTCAAT
Locus tag: tll0048 (deprecated)
|
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| tll0048 (deprecated) | -92 | 3.6 | ATTGCAACTCATTGGCAAA | |
| -59 | 4.4 | CATTGTAATTATTCTCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fur | ||||
| Ortholog function: Ferric uptake regulator, Fur family | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1649 | -88 | 3.5 | GTTAGTATTTATTTGCAAT |
| Cyanothece sp. ATCC 51142 | cce_2330 | -96 | 5.1 | GTTGCTAATTATTTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0870 | -97 | 4.6 | GTTGCAAATTATTTGCAAT |
| Trichodesmium erythraeum IMS101 | Tery_1958 | -44 | 4.7 | ATTGTGTATCATTGTCAAT |
| Thermosynechococcus elongatus BP-1 | null | -59 | 4.4 | CATTGTAATTATTCTCAAT |
|
Position: -217
Score: 3.3 Sequence: TTTGCAATTTGTTACCACA
Locus tag: tlr0271 (deprecated)
|
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| tlr0271 (deprecated) | -217 | 3.3 | TTTGCAATTTGTTACCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlH | ||||
| Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1018 | -57 | 3.8 | ATAGTTATAAATTTTTAAT |
| Cyanothece sp. ATCC 51142 | cce_4358 | -183 | 2.7 | AATAAATAATTTTTGTAAA |
| -138 | 2.3 | ATTTGTCAATATTTGTAAC | ||
| Cyanothece sp. PCC 8801 | PCC8801_4320 | -186 | 2.3 | ATTTGTCAATATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_12190 | -247 | 2.8 | ATTAAATATTAATTTTTGT |
| Nostoc sp. PCC 7120 | all4365 | -272 | 2.9 | GTTTTTTATTTTTTTCATC |
| -232 | 3 | AATATTAATTTTTCTTTAC | ||
| Trichodesmium erythraeum IMS101 | Tery_3224 | -65 | 3 | GTTTAAAATTTTTTGATAT |
|
Position: -99
Score: 3.1 Sequence: GATTAGAGTCGTTATTAAG
Locus tag: tlr0455 (deprecated)
|
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| tlr0455 (deprecated) | -99 | 3.1 | GATTAGAGTCGTTATTAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -24
Score: 3.7 Sequence: ATCGAGCTGAATTCTCGAT
Locus tag: tlr0499 (deprecated)
|
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| tlr0499 (deprecated) | -24 | 3.7 | ATCGAGCTGAATTCTCGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sigC | ||||
| Ortholog function: RNA polymerase sigma-subunit | ||||
| Nostoc sp. PCC 7120 | all1692 | -320 | 3.5 | AATAAACATAATTTTTACT |
|
Position: -76
Score: 3.7 Sequence: ATTGCGAAAGAATTGCAAA
Locus tag: tll0513 (deprecated)
|
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| tll0513 (deprecated) | -76 | 3.7 | ATTGCGAAAGAATTGCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: Fe ABC transport system, substrate-binding protein | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_3508 | -165 | 3.5 | ATTAGGAATGAATCGTAAT |
| Trichodesmium erythraeum IMS101 | Tery_3377 | -97 | 4.4 | ATTAAGAATAAATTGCAAT |
|
Position: -153
Score: 3.5 Sequence: AATGTTAATTATCGGCAAA
Position: -55
Score: 3.6 Sequence: ATTCACGATTCTTCACAAT
Locus tag: tlr0731 (deprecated)
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| tlr0731 (deprecated) | -153 | 3.5 | AATGTTAATTATCGGCAAA | |
| -55 | 3.6 | ATTCACGATTCTTCACAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psaA | ||||
| Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1 | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_4671 | -292 | 3.4 | TCTATGAATTTTTATTAAT |
|
Position: -45
Score: 4 Sequence: AATTAAAATTATATTCATC
Locus tag: tll0769 (deprecated)
|
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| tll0769 (deprecated) | -45 | 4 | AATTAAAATTATATTCATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cce_4396 | ||||
| Ortholog function: Predicted transcription regualator, ArsR family | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_2984 | -78 | 2.7 | TATATGAATATCTTGTAAT |
| -48 | 3.9 | ATTGCAATTATATTACAAT | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_0938 | -30 | 4 | AATAAAAAAGTTTCGTAAT |
| Thermosynechococcus elongatus BP-1 | null | -45 | 4 | AATTAAAATTATATTCATC |
|
Position: -25
Score: 3.4 Sequence: CTTCACAAAAGGTAACAAT
Locus tag: tll0889 (deprecated)
|
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| tll0889 (deprecated) | -25 | 3.4 | CTTCACAAAAGGTAACAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0913 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0913 | -146 | 2.2 | TTTTTACAACATTTTTAAA |
| -68 | 3.8 | AATGAGAAAATTTTGATAT | ||
| Synechocystis sp. PCC 6803 | sll1911 | -59 | 4.2 | GTTGTTAAAATTTAACAAT |
| Cyanothece sp. ATCC 51142 | cce_0019 | -75 | 3.1 | TTTTTTAATATTTTTTGAT |
| Cyanothece sp. PCC 8801 | PCC8801_2812 | -67 | 4.4 | TATGATAAAATTTATTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4773 | -64 | 2.4 | TTTATGAAATATTTATGAT |
|
Position: -212
Score: 3.2 Sequence: TATCTTTACATTTCTCAAG
Position: -128
Score: 4 Sequence: CTTGCTAAATGCTATTAAT
Position: -121
Score: 5.5 Sequence: AATGCTATTAATTCTCAAT
Position: -111
Score: 3 Sequence: ATTCTCAATAATCTGCTAT
Position: -76
Score: 4.6 Sequence: ATTGAGACAGATATTCAAT
Position: 6
Score: 3 Sequence: ATCGCCAGTGAATCTCCAA
Locus tag: tlr1050 (deprecated)
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| tlr1050 (deprecated) | -212 | 3.2 | TATCTTTACATTTCTCAAG | |
| -128 | 4 | CTTGCTAAATGCTATTAAT | ||
| -121 | 5.5 | AATGCTATTAATTCTCAAT | ||
| -111 | 3 | ATTCTCAATAATCTGCTAT | ||
| -76 | 4.6 | ATTGAGACAGATATTCAAT | ||
| 6 | 3 | ATCGCCAGTGAATCTCCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: isiA | ||||
| Ortholog function: Photosystem II chlorophyll-binding protein | ||||
| Synechocystis sp. PCC 6803 | sll0247 | -269 | 2.8 | ATTTCTTAATAATTTTAGT |
| Cyanothece sp. ATCC 51142 | cce_1785 | -18 | 4.4 | ATTGCAAATCTTTTTAAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_2434 | -61 | 4.7 | ATTGAGTTTATTTCTCAAC |
| Nostoc sp. PCC 7120 | all4001 | -161 | 4.8 | ATTAAGAATCTTTTTCAAT |
| Trichodesmium erythraeum IMS101 | Tery_1667 | -156 | 3.2 | TTTTATAATTTCTTTTAAA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1542 | -45 | 5.2 | ATTGAGAATTATTGTAAAT |
| Thermosynechococcus elongatus BP-1 | null | -121 | 5.5 | AATGCTATTAATTCTCAAT |
|
Position: -120
Score: 3.6 Sequence: ACTGCAAATAATTTCCAAC
Position: 22
Score: 3.6 Sequence: ATTGCAGACAGTTCACTTT
Locus tag: tll1492 (deprecated)
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| tll1492 (deprecated) | -120 | 3.6 | ACTGCAAATAATTTCCAAC | |
| 22 | 3.6 | ATTGCAGACAGTTCACTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: afuC | ||||
| Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0871 | -83 | 5.1 | GTTGAGAATAGTTCTTAAT |
| Cyanothece sp. ATCC 51142 | cce_3801 | -163 | 4.2 | ATTGAAAATTAATGCTAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_3510 | -105 | 5.3 | ATTGAGAATAATTTTCAAA |
| -60 | 4 | GTTGAATAATAGTCTTAAT | ||
| Microcystis aeruginosa NIES-843 | MAE_12460 | -117 | 4.4 | TTTGAGAAAGTTTCCTAAT |
| Trichodesmium erythraeum IMS101 | Tery_3222 | -94 | 5.1 | AATGAAAAAAATATTCAAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1406 | -81 | 4.2 | ATTGAGAATAAATCGCAGA |
| Synechococcus sp. JA-3-3Ab | CYA_2794 | -26 | 3.8 | AGTGAAAATCTTTTGCAAC |
| Gloeobacter violaceus PCC 7421 | gll1012 | -64 | 3.7 | ATTGACAATTAATTGCAGC |
|
Position: -174
Score: 3.4 Sequence: TATACAAAAATTTAGCGTT
Position: -152
Score: 3.2 Sequence: ATGAACAAATTTTATTAAG
Locus tag: tll1529 (deprecated)
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| tll1529 (deprecated) | -174 | 3.4 | TATACAAAAATTTAGCGTT | |
| -152 | 3.2 | ATGAACAAATTTTATTAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fdx | ||||
| Ortholog function: Predicted ferredoxin | ||||
| Nostoc sp. PCC 7120 | asl0884 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0643 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -277
Score: 3.1 Sequence: CTTGATATTTCGTAAGAAT
Position: -143
Score: 3 Sequence: AAGGGAAGGGTTTCTTATT
Locus tag: tlr1630 (deprecated)
|
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| tlr1630 (deprecated) | -277 | 3.1 | CTTGATATTTCGTAAGAAT | |
| -143 | 3 | AAGGGAAGGGTTTCTTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -135
Score: 3.8 Sequence: ATTTAGTTTTACTAACAAT
Position: -56
Score: 3.7 Sequence: GTTGATGACTGTTTTCAAG
Locus tag: tlr1843 (deprecated)
|
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| tlr1843 (deprecated) | -135 | 3.8 | ATTTAGTTTTACTAACAAT | |
| -56 | 3.7 | GTTGATGACTGTTTTCAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbA | ||||
| Ortholog function: photosystem II, reaction center protein | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_1059 | -182 | 3.4 | ATTATTAATAAGTTTCAAA |
| Thermosynechococcus elongatus BP-1 | null | -135 | 3.8 | ATTTAGTTTTACTAACAAT |
|
Position: -13
Score: 3.8 Sequence: ATTCATAACGACTATGACT
Locus tag: tlr1844 (deprecated)
|
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| tlr1844 (deprecated) | -13 | 3.8 | ATTCATAACGACTATGACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbA | ||||
| Ortholog function: photosystem II, reaction center protein | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_1059 | -182 | 3.4 | ATTATTAATAAGTTTCAAA |
| Thermosynechococcus elongatus BP-1 | null | -135 | 3.8 | ATTTAGTTTTACTAACAAT |
|
Position: -83
Score: 3.1 Sequence: AAAGCTATAGATTTTCACG
Locus tag: tll1894 (deprecated)
|
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| tll1894 (deprecated) | -83 | 3.1 | AAAGCTATAGATTTTCACG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaA | ||||
| Ortholog function: Heme A synthase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0256 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22920 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1780 | -278 | 3.5 | ATTGTTAAAATTATGAAAT |
| -167 | 3.3 | ATTAAAAAAAAATTTAAAA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_2601 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1340 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -157
Score: 3.1 Sequence: AATTATGAACTTTTGTAAT
Position: -147
Score: 3.2 Sequence: TTTTGTAATACTTCGCAAC
Locus tag: tlr2034 (deprecated)
|
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| tlr2034 (deprecated) | -157 | 3.1 | AATTATGAACTTTTGTAAT | |
| -147 | 3.2 | TTTTGTAATACTTCGCAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: apcF | ||||
| Ortholog function: Allophycocyanin, beta subunit | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1631 | -257 | 3.3 | TTTTATTATTTTTTTTAAA |
| Cyanothece sp. ATCC 51142 | cce_1944 | -151 | 4.4 | ATTGCTAAAATCTATAATT |
| Cyanothece sp. PCC 7425 | Cyan7425_1838 | -245 | 3 | TTTTATATTATCTTTTAAC |
| Thermosynechococcus elongatus BP-1 | null | -157 | 3.1 | AATTATGAACTTTTGTAAT |
|
Position: -269
Score: 3 Sequence: GCAGACAAACTTTAGCTTT
Position: -173
Score: 3 Sequence: CAAAAAAATGAAAATTAAT
Position: -167
Score: 4.1 Sequence: AATGAAAATTAATTTCTTA
Position: -115
Score: 3 Sequence: CTTGAAAAATTTTTTACTG
Position: -106
Score: 3.2 Sequence: TTTTTTACTGATTTTCAAG
Position: -69
Score: 3.1 Sequence: CACAAAAATAATTTTCTTG
Locus tag: tll2347 (deprecated)
|
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| tll2347 (deprecated) | -269 | 3 | GCAGACAAACTTTAGCTTT | |
| -173 | 3 | CAAAAAAATGAAAATTAAT | ||
| -167 | 4.1 | AATGAAAATTAATTTCTTA | ||
| -115 | 3 | CTTGAAAAATTTTTTACTG | ||
| -106 | 3.2 | TTTTTTACTGATTTTCAAG | ||
| -69 | 3.1 | CACAAAAATAATTTTCTTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlL | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2347 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Synechocystis sp. PCC 6803 | slr0749 | -173 | 3.3 | ATTTTATTTTTGTCTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0791 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16230 | -150 | 2.8 | ATTTATATAATTTTTAAGC |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |