Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Synechococcus sp. PCC 7002

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus sp. PCC 7002
Orthologous TF(s) SYNPCC7002_A1649
Regulated genes 37
Built upon 167 sites [see more]
Predicted regulatory interactions in Synechococcus sp. PCC 7002
Locus tag Position Score Sequence
Position: -38
Score: 4.6
Sequence: TTTGAGAATTATTTTTAGT
Locus tag: SYNPCC7002_G0006
SYNPCC7002_G0006 -38 4.6 TTTGAGAATTATTTTTAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iutA
Ortholog function: Ferric aerobactin receptor
Synechococcus sp. PCC 7002 SYNPCC7002_G0006 -38 4.6 TTTGAGAATTATTTTTAGT
Position: -51
Score: 5.3
Sequence: GATGCTAATAATTCTCATT
Locus tag: SYNPCC7002_G0007
SYNPCC7002_G0007 -51 5.3 GATGCTAATAATTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pchR
Ortholog function: Predicted siderophore synthesis regulator, AraC family
Cyanothece sp. PCC 7425 Cyan7425_2415 -264 4.6 ATTGATGATTATTTTCAAC
Position: -250
Score: 3.2
Sequence: AACAACACTATTTCGCTTT
Position: -135
Score: 3
Sequence: AAAGCCTATAAGTATTTAT
Position: -129
Score: 3.5
Sequence: TATAAGTATTTATATCAAA
Position: -119
Score: 2.9
Sequence: TATATCAAATGATATAAAT
Position: -112
Score: 3.3
Sequence: AATGATATAAATTCAGCCT
Position: -71
Score: 3
Sequence: AATAAATAGATTGATAAAT
Position: -68
Score: 3
Sequence: AAATAGATTGATAAATAAT
Position: -62
Score: 4.1
Sequence: ATTGATAAATAATTTAAGT
Locus tag: SYNPCC7002_G0061
SYNPCC7002_G0061 -250 3.2 AACAACACTATTTCGCTTT
-135 3 AAAGCCTATAAGTATTTAT
-129 3.5 TATAAGTATTTATATCAAA
-119 2.9 TATATCAAATGATATAAAT
-112 3.3 AATGATATAAATTCAGCCT
-71 3 AATAAATAGATTGATAAAT
-68 3 AAATAGATTGATAAATAAT
-62 4.1 ATTGATAAATAATTTAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0061
Ortholog function: Two-component sensor histidine kinase
Synechococcus sp. PCC 7002 SYNPCC7002_G0061 -62 4.1 ATTGATAAATAATTTAAGT
Cyanothece sp. PCC 8801 PCC8801_1928 -184 2 AATATTTTATATTTATAGT
Nostoc sp. PCC 7120 alr3155 -98 4.1 ATTACGAATTAATATAAAT
Position: 27
Score: 3.8
Sequence: ATTGAAGACGATGAGCTAT
Locus tag: SYNPCC7002_G0062
SYNPCC7002_G0062 27 3.8 ATTGAAGACGATGAGCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0062
Ortholog function: Two-component response regulator, LuxR family
Synechococcus sp. PCC 7002 SYNPCC7002_G0062 -62 4.1 ATTGATAAATAATTTAAGT
Cyanothece sp. ATCC 51142 cce_3895 16 2.8 GTTTAAAAATTCTTTTAGT
Cyanothece sp. PCC 8801 PCC8801_1927 -184 2 AATATTTTATATTTATAGT
Nostoc sp. PCC 7120 alr3156 -98 4.1 ATTACGAATTAATATAAAT
Position: 11
Score: 3.1
Sequence: AAGGCGATTCATTATTTTC
Locus tag: SYNPCC7002_G0092
SYNPCC7002_G0092 11 3.1 AAGGCGATTCATTATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecB
Ortholog function: Fe(3+) dicitrate ABC transport system, substrate-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_G0102 -46 3.2 ATTAAGAACTTTTTGAAGT
Synechococcus sp. PCC 7002 SYNPCC7002_G0005 -38 4.6 TTTGAGAATTATTTTTAGT
Synechocystis sp. PCC 6803 slr1492 -86 4.1 TTTGAGAATTAGTTGCAGT
Cyanothece sp. PCC 7425 Cyan7425_2440 -66 5.1 ATTGAGAGTATTTCTTATT
Nostoc sp. PCC 7120 alr2627 -106 4.7 TTTGATATTAATTACTAAT
Position: 3
Score: 3.7
Sequence: AATAATCATCTATGTCATT
Locus tag: SYNPCC7002_G0098
SYNPCC7002_G0098 3 3.7 AATAATCATCTATGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0098
Ortholog function: Predicted TonB-dependent siderophore receptor
Synechococcus sp. PCC 7002 SYNPCC7002_G0098 -94 3.7 ATTTCTTATTAATATAAAT
Position: -94
Score: 3.7
Sequence: ATTTCTTATTAATATAAAT
Position: -65
Score: 4
Sequence: CATGCTAGACTTTTTCATT
Locus tag: SYNPCC7002_G0099
SYNPCC7002_G0099 -94 3.7 ATTTCTTATTAATATAAAT
-65 4 CATGCTAGACTTTTTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pchR
Ortholog function: Predicted siderophore synthesis regulator, AraC family
Synechococcus sp. PCC 7002 SYNPCC7002_G0099 -94 3.7 ATTTCTTATTAATATAAAT
Cyanothece sp. PCC 7425 Cyan7425_2411 -71 4.9 ATTGTTAATCTTTTTCATT
Nostoc sp. PCC 7120 all2237 -40 5.1 TTTGAGAAAGTTTATCTAT
Position: -46
Score: 3.2
Sequence: ATTAAGAACTTTTTGAAGT
Position: 7
Score: 3.5
Sequence: ATTGGTATCGATTATTAGG
Locus tag: SYNPCC7002_G0103
SYNPCC7002_G0103 -46 3.2 ATTAAGAACTTTTTGAAGT
7 3.5 ATTGGTATCGATTATTAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: Outer membrane ferrichrome-iron receptor
Synechococcus sp. PCC 7002 SYNPCC7002_G0103 -46 3.2 ATTAAGAACTTTTTGAAGT
Position: -279
Score: 4.2
Sequence: ATTAAGAGATTATCTCAAT
Position: -244
Score: 4.1
Sequence: ATCGAGAATCTATTTTATT
Locus tag: SYNPCC7002_G0137
SYNPCC7002_G0137 -279 4.2 ATTAAGAGATTATCTCAAT
-244 4.1 ATCGAGAATCTATTTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: Iron-siderophore complex transporter
Synechococcus sp. PCC 7002 SYNPCC7002_G0137 -279 4.2 ATTAAGAGATTATCTCAAT
Synechocystis sp. PCC 6803 sll1404 -286 4.6 TATGTGAAATATTATTATT
-110 6 ATTGAAAATAGTTATCAAT
-64 4.6 ATTGAGAATTACTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_3017 -38 5.7 ATTGATAACTTTTCTCAAT
Cyanothece sp. PCC 7425 Cyan7425_2418 -264 4.6 ATTGATGATTATTTTCAAC
Position: -67
Score: 4.6
Sequence: ATTGAGATAATCTCTTAAT
Locus tag: SYNPCC7002_G0138
SYNPCC7002_G0138 -67 4.6 ATTGAGATAATCTCTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iutA
Ortholog function: Ferric aerobactin receptor
Synechococcus sp. PCC 7002 SYNPCC7002_G0138 -67 4.6 ATTGAGATAATCTCTTAAT
Position: -73
Score: 3.8
Sequence: CTTGAAAAGGACTTTTATT
Locus tag: SYNPCC7002_A0270
SYNPCC7002_A0270 -73 3.8 CTTGAAAAGGACTTTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigC
Ortholog function: RNA polymerase sigma-subunit
Nostoc sp. PCC 7120 all1692 -320 3.5 AATAAACATAATTTTTACT
Position: -83
Score: 5.1
Sequence: GTTGAGAATAGTTCTTAAT
Locus tag: SYNPCC7002_A0871
SYNPCC7002_A0871 -83 5.1 GTTGAGAATAGTTCTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0871 -83 5.1 GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142 cce_3801 -163 4.2 ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425 Cyan7425_3510 -105 5.3 ATTGAGAATAATTTTCAAA
-60 4 GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843 MAE_12460 -117 4.4 TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101 Tery_3222 -94 5.1 AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_1406 -81 4.2 ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab CYA_2794 -26 3.8 AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421 gll1012 -64 3.7 ATTGACAATTAATTGCAGC
Position: -64
Score: 2.9
Sequence: AGAAAATTTTGATATCATT
Position: -57
Score: 3
Sequence: TTTGATATCATTTACAACA
Position: -48
Score: 2.9
Sequence: ATTTACAACAAGTAATGTT
Position: -18
Score: 3
Sequence: AAAGAAAATTTAAATCCTA
Locus tag: SYNPCC7002_A0913
SYNPCC7002_A0913 -64 2.9 AGAAAATTTTGATATCATT
-57 3 TTTGATATCATTTACAACA
-48 2.9 ATTTACAACAAGTAATGTT
-18 3 AAAGAAAATTTAAATCCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0913
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0913 -146 2.2 TTTTTACAACATTTTTAAA
-68 3.8 AATGAGAAAATTTTGATAT
Synechocystis sp. PCC 6803 sll1911 -59 4.2 GTTGTTAAAATTTAACAAT
Cyanothece sp. ATCC 51142 cce_0019 -75 3.1 TTTTTTAATATTTTTTGAT
Cyanothece sp. PCC 8801 PCC8801_2812 -67 4.4 TATGATAAAATTTATTAAA
Trichodesmium erythraeum IMS101 Tery_4773 -64 2.4 TTTATGAAATATTTATGAT
Position: -64
Score: 4.2
Sequence: CAGGAGAATAGTTATAAAT
Position: -57
Score: 3.8
Sequence: ATAGTTATAAATTTTTAAT
Position: -51
Score: 3.2
Sequence: ATAAATTTTTAATATCCAT
Locus tag: SYNPCC7002_A1018
SYNPCC7002_A1018 -64 4.2 CAGGAGAATAGTTATAAAT
-57 3.8 ATAGTTATAAATTTTTAAT
-51 3.2 ATAAATTTTTAATATCCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
Position: -291
Score: 3.3
Sequence: ACTGATGACAAATCTTGAT
Position: -248
Score: 3
Sequence: ACTCAATTATGTAATCTAT
Position: -216
Score: 3.2
Sequence: TAAGATTATATTTAGATTT
Position: -110
Score: 3.2
Sequence: ATTAACGAGATTTAGCTAT
Locus tag: SYNPCC7002_A1161
SYNPCC7002_A1161 -291 3.3 ACTGATGACAAATCTTGAT
-248 3 ACTCAATTATGTAATCTAT
-216 3.2 TAAGATTATATTTAGATTT
-110 3.2 ATTAACGAGATTTAGCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: -295
Score: 3
Sequence: ATAGCTAAATCTCGTTAAT
Position: -187
Score: 2.9
Sequence: ATCTAAATATAATCTTAAG
Position: -114
Score: 3.4
Sequence: ATCAAGATTTGTCATCAGT
Locus tag: SYNPCC7002_A1162
SYNPCC7002_A1162 -295 3 ATAGCTAAATCTCGTTAAT
-187 2.9 ATCTAAATATAATCTTAAG
-114 3.4 ATCAAGATTTGTCATCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase, subunit II
Cyanothece sp. ATCC 51142 cce_1977 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0567 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22930 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr0950 -134 3.7 TTTACTCAAGATTATTAAT
Position: 27
Score: 3.7
Sequence: ATCGCCACCGATTATCAAA
Locus tag: SYNPCC7002_A1164
SYNPCC7002_A1164 27 3.7 ATCGCCACCGATTATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase, subunit III
Cyanothece sp. ATCC 51142 cce_1975 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0569 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22950 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr2516 -190 3 AgTTAaAAagtTaaTaAgT
Position: -299
Score: 3.1
Sequence: TTTTACAAAAGTTAACTTG
Position: -275
Score: 2.9
Sequence: ACTGAGAATAATTGTAGGA
Position: -261
Score: 3
Sequence: TAGGATAAAGCCAATCCTT
Position: -241
Score: 3.7
Sequence: ATTGCCAAATATATGCGAT
Locus tag: SYNPCC7002_A1292
SYNPCC7002_A1292 -299 3.1 TTTTACAAAAGTTAACTTG
-275 2.9 ACTGAGAATAATTGTAGGA
-261 3 TAGGATAAAGCCAATCCTT
-241 3.7 ATTGCCAAATATATGCGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Photosystem II chlorophyll-binding protein
Synechocystis sp. PCC 6803 sll0247 -269 2.8 ATTTCTTAATAATTTTAGT
Cyanothece sp. ATCC 51142 cce_1785 -18 4.4 ATTGCAAATCTTTTTAAAT
Cyanothece sp. PCC 7425 Cyan7425_2434 -61 4.7 ATTGAGTTTATTTCTCAAC
Nostoc sp. PCC 7120 all4001 -161 4.8 ATTAAGAATCTTTTTCAAT
Trichodesmium erythraeum IMS101 Tery_1667 -156 3.2 TTTTATAATTTCTTTTAAA
Synechococcus elongatus PCC 7942 Synpcc7942_1542 -45 5.2 ATTGAGAATTATTGTAAAT
Thermosynechococcus elongatus BP-1 null -121 5.5 AATGCTATTAATTCTCAAT
Position: -341
Score: 2.9
Sequence: AAAGCAAAAAATAACTTTT
Position: -335
Score: 3.9
Sequence: AAAAATAACTTTTCTTATT
Position: -282
Score: 3.7
Sequence: TTCACTGATTTTTATCATT
Position: -221
Score: 3.1
Sequence: AATTAGAAGTGTAAATATT
Position: -174
Score: 3.4
Sequence: AATTCTATTTTTTCTTATA
Position: -162
Score: 3.3
Sequence: TCTTATAACTTTTAGCAAG
Position: -107
Score: 3.1
Sequence: AAAAATAGCTAACATCAAT
Position: -103
Score: 3.5
Sequence: ATAGCTAACATCAATCACT
Locus tag: SYNPCC7002_A1443
SYNPCC7002_A1443 -341 2.9 AAAGCAAAAAATAACTTTT
-335 3.9 AAAAATAACTTTTCTTATT
-282 3.7 TTCACTGATTTTTATCATT
-221 3.1 AATTAGAAGTGTAAATATT
-174 3.4 AATTCTATTTTTTCTTATA
-162 3.3 TCTTATAACTTTTAGCAAG
-107 3.1 AAAAATAGCTAACATCAAT
-103 3.5 ATAGCTAACATCAATCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate-flavodoxin oxidoreductase
Synechococcus sp. PCC 7002 SYNPCC7002_A1443 -165 2.2 TTTTCTTATAACTTTTAGC
Cyanothece sp. PCC 8801 PCC8801_3918 -67 3.4 TTTGTCAATAATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_38140 -292 3.9 ATTCTGAATATTAATTAAT
Nostoc sp. PCC 7120 alr2803 -92 3.8 ATTTTTAATCAGTATTAAT
Position: -204
Score: 3.5
Sequence: TTTAAGAAACGTTAACCAT
Position: -117
Score: 3.6
Sequence: ATTTATACCTATTGGCTTT
Position: -92
Score: 3.2
Sequence: TTTGACAGGGAGAATCCAT
Position: -10
Score: 3.6
Sequence: ATTAAAAACTATGACTATT
Locus tag: SYNPCC7002_A1560
SYNPCC7002_A1560 -204 3.5 TTTAAGAAACGTTAACCAT
-117 3.6 ATTTATACCTATTGGCTTT
-92 3.2 TTTGACAGGGAGAATCCAT
-10 3.6 ATTAAAAACTATGACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -297
Score: 3.1
Sequence: AAAAACAAAAATCGTCTTT
Position: -266
Score: 3.5
Sequence: TTAGAGCAGTTTTATTATT
Position: -257
Score: 3.3
Sequence: TTTTATTATTTTTTTTAAA
Position: -243
Score: 3.9
Sequence: TTAAAGAAATGTAATCAAT
Locus tag: SYNPCC7002_A1631
SYNPCC7002_A1631 -297 3.1 AAAAACAAAAATCGTCTTT
-266 3.5 TTAGAGCAGTTTTATTATT
-257 3.3 TTTTATTATTTTTTTTAAA
-243 3.9 TTAAAGAAATGTAATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: Allophycocyanin, beta subunit
Synechococcus sp. PCC 7002 SYNPCC7002_A1631 -257 3.3 TTTTATTATTTTTTTTAAA
Cyanothece sp. ATCC 51142 cce_1944 -151 4.4 ATTGCTAAAATCTATAATT
Cyanothece sp. PCC 7425 Cyan7425_1838 -245 3 TTTTATATTATCTTTTAAC
Thermosynechococcus elongatus BP-1 null -157 3.1 AATTATGAACTTTTGTAAT
Position: -88
Score: 3.5
Sequence: GTTAGTATTTATTTGCAAT
Locus tag: SYNPCC7002_A1649
SYNPCC7002_A1649 -88 3.5 GTTAGTATTTATTTGCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Ferric uptake regulator, Fur family
Synechococcus sp. PCC 7002 SYNPCC7002_A1649 -88 3.5 GTTAGTATTTATTTGCAAT
Cyanothece sp. ATCC 51142 cce_2330 -96 5.1 GTTGCTAATTATTTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0870 -97 4.6 GTTGCAAATTATTTGCAAT
Trichodesmium erythraeum IMS101 Tery_1958 -44 4.7 ATTGTGTATCATTGTCAAT
Thermosynechococcus elongatus BP-1 null -59 4.4 CATTGTAATTATTCTCAAT
Position: -206
Score: 3.4
Sequence: AGTTTTAAATATTGTTAAT
Position: -196
Score: 3
Sequence: ATTGTTAATGTCCCCCAAC
Position: -154
Score: 3.4
Sequence: ATTTACATCAATGCTTTTT
Position: -125
Score: 3.2
Sequence: TTTTAGAGCAGTCCTAAAT
Position: -62
Score: 3.1
Sequence: TTTGAATACATCTATTTAG
Position: -49
Score: 3
Sequence: ATTTAGATAGAACCTTTAT
Locus tag: SYNPCC7002_A1961
SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
-196 3 ATTGTTAATGTCCCCCAAC
-154 3.4 ATTTACATCAATGCTTTTT
-125 3.2 TTTTAGAGCAGTCCTAAAT
-62 3.1 TTTGAATACATCTATTTAG
-49 3 ATTTAGATAGAACCTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -173
Score: 3
Sequence: TCTGAAATGGTTTACCGAT
Position: -96
Score: 3.1
Sequence: ATTGGCTCCTAGTATCTTT
Position: 11
Score: 3
Sequence: ATTTCCAAAATTTAGCCAA
Locus tag: SYNPCC7002_A1962
SYNPCC7002_A1962 -173 3 TCTGAAATGGTTTACCGAT
-96 3.1 ATTGGCTCCTAGTATCTTT
11 3 ATTTCCAAAATTTAGCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaB
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A2
Synechococcus sp. PCC 7002 SYNPCC7002_A1962 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0990 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47570 -297 3.2 ATTAATAAACTTTTGTAAA
Gloeobacter violaceus PCC 7421 gvip471 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -111
Score: 3.1
Sequence: GTTTAGGAAGATATTCTTT
Position: -105
Score: 3.1
Sequence: GAAGATATTCTTTGGGAAT
Position: 23
Score: 3
Sequence: CATTGCAACGATTCTTTTT
Locus tag: SYNPCC7002_A2151
SYNPCC7002_A2151 -111 3.1 GTTTAGGAAGATATTCTTT
-105 3.1 GAAGATATTCTTTGGGAAT
23 3 CATTGCAACGATTCTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142 cce_0893 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2861 -49 3.8 ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120 asl0883 -90 3.5 ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab CYA_0642 -92 2.8 ATTAAAAATATGATTTAAA
Position: -305
Score: 3.4
Sequence: TTGAAGAATCTATATCTAT
Position: -260
Score: 3
Sequence: CGTGAACAACGGTGTCATT
Position: -148
Score: 3.6
Sequence: ATTAAGAAAGGTAAACTTT
Position: -141
Score: 3.1
Sequence: AAGGTAAACTTTTCTCACA
Position: -119
Score: 3.8
Sequence: GTCTAGATTCACTATCATT
Locus tag: SYNPCC7002_A2199
SYNPCC7002_A2199 -305 3.4 TTGAAGAATCTATATCTAT
-260 3 CGTGAACAACGGTGTCATT
-148 3.6 ATTAAGAAAGGTAAACTTT
-141 3.1 AAGGTAAACTTTTCTCACA
-119 3.8 GTCTAGATTCACTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -16
Score: 3.3
Sequence: ATTTAGGAAAATTTTTATG
Position: -13
Score: 3.1
Sequence: TAGGAAAATTTTTATGACC
Locus tag: SYNPCC7002_A2345
SYNPCC7002_A2345 -16 3.3 ATTTAGGAAAATTTTTATG
-13 3.1 TAGGAAAATTTTTATGACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase, subunit N
Synechococcus sp. PCC 7002 SYNPCC7002_A2345 -126 3.6 TTTTATAAAAACTCTAAGT
Cyanothece sp. ATCC 51142 cce_4534 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0789 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16250 -107 2.8 ATTAAGTAATTCTTTATAT
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -223
Score: 3
Sequence: TTTTTTGTTTATTGTCTTT
Position: -220
Score: 3.3
Sequence: TTTGTTTATTGTCTTTATT
Position: -217
Score: 3
Sequence: GTTTATTGTCTTTATTTAT
Position: -177
Score: 2.9
Sequence: AATCTAAAAAGTTTTTATC
Position: -135
Score: 3.2
Sequence: TTTTAAAAGTTTTATAAAA
Position: -126
Score: 3.6
Sequence: TTTTATAAAAACTCTAAGT
Locus tag: SYNPCC7002_A2347
SYNPCC7002_A2347 -223 3 TTTTTTGTTTATTGTCTTT
-220 3.3 TTTGTTTATTGTCTTTATT
-217 3 GTTTATTGTCTTTATTTAT
-177 2.9 AATCTAAAAAGTTTTTATC
-135 3.2 TTTTAAAAGTTTTATAAAA
-126 3.6 TTTTATAAAAACTCTAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -241
Score: 3.2
Sequence: TTTTGTAAAGACTATTTTT
Position: -234
Score: 3
Sequence: AAGACTATTTTTTGTGATT
Position: -226
Score: 3
Sequence: TTTTTGTGATTTTATTATT
Position: -153
Score: 3.4
Sequence: GAAGATAATGTCTTACATT
Position: -66
Score: 3
Sequence: GTTGCTTTCCCTTTTCTTT
Locus tag: SYNPCC7002_A2351
SYNPCC7002_A2351 -241 3.2 TTTTGTAAAGACTATTTTT
-234 3 AAGACTATTTTTTGTGATT
-226 3 TTTTTGTGATTTTATTATT
-153 3.4 GAAGATAATGTCTTACATT
-66 3 GTTGCTTTCCCTTTTCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2351
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2351 -216 2.9 TTTATTATTGTTTTTTAGT
Cyanothece sp. ATCC 51142 cce_3809 -132 3.2 GTTTTTATTTTCTGTCAAT
Cyanothece sp. PCC 8801 PCC8801_2575 -247 3.1 ATTTCTCCTTATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_2644 -122 4.2 AATTAGATTAATTTTGAAT
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