Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Synechococcus sp. PCC 7002

Reference regulog properties
Source regulog: LexA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus sp. PCC 7002
Orthologous TF(s) SYNPCC7002_A1849
Regulated genes 3
Built upon 26 sites [see more]
Predicted regulatory interactions in Synechococcus sp. PCC 7002
Locus tag Position Score Sequence
Position: -25
Score: 3.9
Sequence: AGAACAGTTGTATG
Locus tag: SYNPCC7002_A0119
SYNPCC7002_A0119 -25 3.9 AGAACAGTTGTATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ssb
Ortholog function: single-stranded DNA-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0119 -25 3.9 AGAACAGTTGTATG
Cyanothece sp. PCC 7425 Cyan7425_1469 -18 4.1 AGTACAGGTAAACT
Microcystis aeruginosa NIES-843 MAE_39060 -33 4.3 CATACTATTGTACT
Nostoc sp. PCC 7120 alr0088 -28 5.1 AGTACTTATGTACT
Position: -64
Score: 4.3
Sequence: AGTACGATTGAACT
Locus tag: SYNPCC7002_A0426
SYNPCC7002_A0426 -64 4.3 AGTACGATTGAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Synechococcus sp. PCC 7002 SYNPCC7002_A0426 -64 4.3 AGTACGATTGAACT
Cyanothece sp. ATCC 51142 cce_4639 -47 4.8 AATACTTTTGTACT
Cyanothece sp. PCC 7425 Cyan7425_1671 -39 4.5 AGTACGGATATACT
Microcystis aeruginosa NIES-843 MAE_16070 -40 4.6 CATACTGCTGTACT
Nostoc sp. PCC 7120 all3272 -66 4.6 AGTATATCTGTTCT
Prochlorococcus marinus str. MIT 9313 PMT1727 -145 4.9 GGTACGTCTGTACT
Synechococcus sp. WH 8102 SYNW2062 -78 4.7 CGTACGCCTGTACT
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