Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PerR regulog to Synechococcus sp. PCC 7002

Reference regulog properties
Source regulog: PerR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Peroxide stress response
Effector: Manganese ion, (Mn2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus sp. PCC 7002
Orthologous TF(s) SYNPCC7002_A1836
Regulated genes 2
Built upon 20 sites [see more]
Predicted regulatory interactions in Synechococcus sp. PCC 7002
Locus tag Position Score Sequence
Position: -79
Score: 5.5
Sequence: TAAGAATTATTCTGG
Locus tag: SYNPCC7002_A0793
SYNPCC7002_A0793 -79 5.5 TAAGAATTATTCTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ahpC
Ortholog function: Peroxiredoxin
Cyanothece sp. ATCC 51142 cce_3126 -63 5.8 TAAGAATTATTCTGA
Synechocystis sp. PCC 6803 sll1621 -144 4.7 ATAGAATAATTATAA
-92 5.4 TCAGAACTATTCTGA
Synechococcus sp. PCC 7002 SYNPCC7002_A0793 -79 5.5 TAAGAATTATTCTGG
Cyanothece sp. PCC 7425 Cyan7425_1596 -138 4.8 TTAGTATAATTCTCA
-86 5.5 TCAGAATTATTCTGG
Position: -273
Score: 4.9
Sequence: TGAGAATAATTGTAG
Locus tag: SYNPCC7002_A1292
SYNPCC7002_A1292 -273 4.9 TGAGAATAATTGTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Iron stress-induced chlorophyll-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A1292 -273 4.9 TGAGAATAATTGTAG
Cyanothece sp. PCC 7425 Cyan7425_2434 -95 4.9 TGAGAAAGATTCTGA
Synechococcus elongatus PCC 7942 Synpcc7942_1542 -43 5.2 TGAGAATTATTGTAA
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