Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PirR regulog to Synechococcus sp. PCC 7002

Reference regulog properties
Source regulog: PirR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor
Biological process: Salt stress response
Effector:
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus sp. PCC 7002
Orthologous TF(s) SYNPCC7002_A2718
Regulated genes 2
Built upon 11 sites [see more]
Predicted regulatory interactions in Synechococcus sp. PCC 7002
Locus tag Position Score Sequence
Position: -115
Score: 5.3
Sequence: TTGTTTCTTTTTGAGATACAT
Locus tag: SYNPCC7002_A2717
SYNPCC7002_A2717 -115 5.3 TTGTTTCTTTTTGAGATACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pirA
Ortholog function: Pirin-like protein
Cyanothece sp. ATCC 51142 cce_2769 -51 5.1 TTGTGTCTTTTTTAGATACTT
-22 5.3 TTGTCAATCATTTAGATACAA
19 5.3 TTGTCTTTTATTTAAAAACAA
Synechococcus sp. PCC 7002 SYNPCC7002_A2717 -115 5.3 TTGTTTCTTTTTGAGATACAT
-74 5.1 TTGTCTTTTATTTGGCGGCAA
Synechocystis sp. PCC 6803 sll1773 -118 5.3 TTGTCCCTATTTTGGATGCAA
-77 5 TTGTCTTTATTGGGGATGCAA
Position: -102
Score: 5.3
Sequence: ATGTATCTCAAAAAGAAACAA
Locus tag: SYNPCC7002_A2718
SYNPCC7002_A2718 -102 5.3 ATGTATCTCAAAAAGAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pirR
Ortholog function: Salt stress response transcriptional regulator, LysR family
Synechococcus sp. PCC 7002 SYNPCC7002_A2718 -143 5.1 TTGCCGCCAAATAAAAGACAA
-102 5.3 ATGTATCTCAAAAAGAAACAA
Synechocystis sp. PCC 6803 slr1871 -73 5 TTGCATCCCCAATAAAGACAA
-32 5.3 TTGCATCCAAAATAGGGACAA
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