Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Microcystis aeruginosa NIES-843

Reference regulog properties
Source regulog: Crp - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Phylum: Cyanobacteria
Propagated regulon:
Target genome Microcystis aeruginosa NIES-843
Orthologous TF(s) MAE_49390
Regulated genes 16
Built upon 106 sites [see more]
Predicted regulatory interactions in Microcystis aeruginosa NIES-843
Locus tag Position Score Sequence
Position: -44
Score: 3.6
Sequence: TTTGATTATGATCGCC
Locus tag: MAE_02800
MAE_02800 -44 3.6 TTTGATTATGATCGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Cyanothece sp. ATCC 51142 cce_0800 -23 3.6 CATGATTTTATTCAGA
Cyanothece sp. PCC 8801 PCC8801_3887 -203 4.3 GGTGACAGAAATCAAA
Microcystis aeruginosa NIES-843 MAE_02800 -44 3.6 TTTGATTATGATCGCC
Nostoc sp. PCC 7120 all2561 -44 4.4 AATGATATAGCTCACA
Synechococcus elongatus PCC 7942 Synpcc7942_2079 -63 4.2 TGTGATTAAGCACACA
Position: 5
Score: 4.1
Sequence: GATGTTCAAAATCACC
Locus tag: MAE_10240
MAE_10240 5 4.1 GATGTTCAAAATCACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcC
Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated
Cyanothece sp. ATCC 51142 cce_2911 5 4.1 AATGTTTAAAGTCACC
Cyanothece sp. PCC 8801 PCC8801_2788 5 3.9 GATGTTTAAAGTCACC
Microcystis aeruginosa NIES-843 MAE_10240 5 4.1 GATGTTCAAAATCACC
Trichodesmium erythraeum IMS101 Tery_3647 5 4.2 AATGTTTAAGATCACA
Synechococcus sp. JA-3-3Ab CYA_2225 5 3.7 CATGTTTAAGATCACG
Synechococcus sp. WH 8102 SYNW0483 5 3.9 GTTGTTCAAAGTCACC
Thermosynechococcus elongatus BP-1 null -233 3.6 CATGAAAGAAGTCACC
Position: 5
Score: 4
Sequence: TGGGACATTAATCAAA
Locus tag: MAE_15160
MAE_15160 5 4 TGGGACATTAATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cupA
Ortholog function: Carbon dioxide hydration protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0174 -300 4 CGTGATTTTGCTCAAC
Cyanothece sp. PCC 7425 Cyan7425_4859 -303 4.7 TGTGATTTTGATCAAC
Microcystis aeruginosa NIES-843 MAE_15160 5 4 TGGGACATTAATCAAA
Synechococcus sp. JA-3-3Ab CYA_0638 -325 4.3 TGTGATTTTGCTCAAC
Position: -48
Score: 3.4
Sequence: ACTGACAAAAAGCTCC
Position: 33
Score: 3.4
Sequence: TCTGTCAATTATCATC
Locus tag: MAE_22950
MAE_22950 -48 3.4 ACTGACAAAAAGCTCC
33 3.4 TCTGTCAATTATCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
Cyanothece sp. ATCC 51142 cce_1975 -78 3.7 TGTGATAAAAAAGCCA
Nostoc sp. PCC 7120 alr2516 -222 3.1 TCTGGAATAATTCCCC
Position: -128
Score: 3.7
Sequence: TGTTGTCAAAGTCACG
Locus tag: MAE_23100
MAE_23100 -128 3.7 TGTTGTCAAAGTCACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis regulator, DeoR family
Cyanothece sp. ATCC 51142 cce_0683 -95 3.9 TGTTGTCAAAGTCACA
Cyanothece sp. PCC 8801 PCC8801_0414 -41 3.8 GTTGATTTAAGTCCTA
Microcystis aeruginosa NIES-843 MAE_23100 -128 3.7 TGTTGTCAAAGTCACG
Nostoc sp. PCC 7120 all2491 -42 3.7 TGTTGTCAAAGTCAAA
Prochlorococcus marinus str. MIT 9313 PMT1607 -71 3.9 CCTGATCTAAGGCAAC
Position: -45
Score: 3.7
Sequence: TATGTTTAAAATCCTA
Locus tag: MAE_46620
MAE_46620 -45 3.7 TATGTTTAAAATCCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlA-II
Ortholog function: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
Synechocystis sp. PCC 6803 sll1874 -403 4.8 TGTGAGAATAATCACA
Cyanothece sp. PCC 8801 PCC8801_3705 -250 4.3 TTTGATTTAATTCAAC
Microcystis aeruginosa NIES-843 MAE_46620 -45 3.7 TATGTTTAAAATCCTA
Position: -130
Score: 4.8
Sequence: TGTGATTTTACTCACA
Locus tag: MAE_53490
MAE_53490 -130 4.8 TGTGATTTTACTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A1600
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A1600 -141 4.5 CGTGATCAGAGTCACG
Synechocystis sp. PCC 6803 slr0442 -203 4.9 TGTGATCCAGATCACA
Synechocystis sp. PCC 6803 sll1268 -162 5.3 TGTGATCTAGATCACA
Microcystis aeruginosa NIES-843 MAE_53490 -130 4.8 TGTGATTTTACTCACA