Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NtcB regulog to Microcystis aeruginosa NIES-843

Reference regulog properties
Source regulog: NtcB - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Nitrite
Phylum: Cyanobacteria
Propagated regulon:
Target genome Microcystis aeruginosa NIES-843
Orthologous TF(s) MAE_09380
Regulated genes 1
Built upon 44 sites [see more]
Predicted regulatory interactions in Microcystis aeruginosa NIES-843
Locus tag Position Score Sequence
Position: -140
Score: 4
Sequence: ATGCGCGATTTGCAT
Locus tag: MAE_53960
MAE_53960 -140 4 ATGCGCGATTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: narB
Ortholog function: nitrate reductase
Synechocystis sp. PCC 6803 sll1454 -125 4.9 ATGCAGTAATCGCAT
Microcystis aeruginosa NIES-843 MAE_53960 -140 4 ATGCGCGATTTGCAT
Nostoc sp. PCC 7120 alr0612 -562 4.8 ATGCAGAAAACGCAT
Trichodesmium erythraeum IMS101 Tery_1070 -250 4.7 ATGTAATAAATGCAT
Synechococcus elongatus PCC 7942 Synpcc7942_1235 -109 4.3 TTGCAGAACATGCAT
Thermosynechococcus elongatus BP-1 tlr1355 -111 4.4 ATACAAAAACTGTAT