Propagation of Fur regulog to Prochlorococcus marinus sp. MED4
| Source regulog: | Fur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Prochlorococcus marinus sp. MED4 |
| Orthologous TF(s) | PMM0637 |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -105
Score: 3.7 Sequence: ATTGTTTAAGACTGTTAAT
Position: -101
Score: 3 Sequence: TTTAAGACTGTTAATGAGT
Position: -38
Score: 3 Sequence: CTATAGTCTTATTATTATT
Position: -35
Score: 3.4 Sequence: TAGTCTTATTATTATTATT
Position: -32
Score: 3.3 Sequence: TCTTATTATTATTATTAAA
Position: -29
Score: 3.2 Sequence: TATTATTATTATTAAATTT
Position: -23
Score: 3.7 Sequence: TATTATTAAATTTGTCTTT
Locus tag: PMM0317
|
||||
| PMM0317 | -105 | 3.7 | ATTGTTTAAGACTGTTAAT | |
| -101 | 3 | TTTAAGACTGTTAATGAGT | ||
| -38 | 3 | CTATAGTCTTATTATTATT | ||
| -35 | 3.4 | TAGTCTTATTATTATTATT | ||
| -32 | 3.3 | TCTTATTATTATTATTAAA | ||
| -29 | 3.2 | TATTATTATTATTAAATTT | ||
| -23 | 3.7 | TATTATTAAATTTGTCTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbM | ||||
| Ortholog function: Photosystem II reaction center M protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0893 | -29 | 3 | TTTCTTATAATTTCTTAAC |
| Cyanothece sp. PCC 8801 | PCC8801_2861 | -49 | 3.8 | ATTGTAAAAAAATATTAAC |
| Nostoc sp. PCC 7120 | asl0883 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0642 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -251
Score: 3.2 Sequence: TGAGGAAATAAATCTTATT
Position: -245
Score: 2.9 Sequence: AATAAATCTTATTTATATT
Position: -239
Score: 3 Sequence: TCTTATTTATATTTTCAAC
Position: -230
Score: 3 Sequence: TATTTTCAACATATTCAAT
Position: -220
Score: 2.9 Sequence: ATATTCAATTTTTTTAATT
Position: -218
Score: 3 Sequence: ATTCAATTTTTTTAATTTT
Position: -213
Score: 3.2 Sequence: ATTTTTTTAATTTTGCATT
Position: -203
Score: 3.2 Sequence: TTTTGCATTGTTTGTTAAT
Position: -187
Score: 3.1 Sequence: AATGGAAAATTATTGAAAT
Position: -186
Score: 3.9 Sequence: ATGGAAAATTATTGAAATT
Position: -180
Score: 3.2 Sequence: AATTATTGAAATTCACAAC
Position: -146
Score: 3.2 Sequence: AAAAAAAAGAAGTATTATT
Position: -143
Score: 3.1 Sequence: AAAAAGAAGTATTATTAAC
Position: -140
Score: 3.1 Sequence: AAGAAGTATTATTAACAAC
Position: -133
Score: 3 Sequence: ATTATTAACAACTTTTTAT
Position: -75
Score: 3.1 Sequence: ATTTTAAAAATAAAACATT
Position: -29
Score: 3 Sequence: ATCTAAATTAATATGCAAA
Position: -1
Score: 3.5 Sequence: TTTGAATAATTTGTTCAAA
Position: 15
Score: 3.2 Sequence: AAAAACGAAATATATCAAT
Position: 31
Score: 3.1 Sequence: AATCAAAATACAAGTCAGT
Locus tag: PMM0447
|
||||
| PMM0447 | -251 | 3.2 | TGAGGAAATAAATCTTATT | |
| -245 | 2.9 | AATAAATCTTATTTATATT | ||
| -239 | 3 | TCTTATTTATATTTTCAAC | ||
| -230 | 3 | TATTTTCAACATATTCAAT | ||
| -220 | 2.9 | ATATTCAATTTTTTTAATT | ||
| -218 | 3 | ATTCAATTTTTTTAATTTT | ||
| -213 | 3.2 | ATTTTTTTAATTTTGCATT | ||
| -203 | 3.2 | TTTTGCATTGTTTGTTAAT | ||
| -187 | 3.1 | AATGGAAAATTATTGAAAT | ||
| -186 | 3.9 | ATGGAAAATTATTGAAATT | ||
| -180 | 3.2 | AATTATTGAAATTCACAAC | ||
| -146 | 3.2 | AAAAAAAAGAAGTATTATT | ||
| -143 | 3.1 | AAAAAGAAGTATTATTAAC | ||
| -140 | 3.1 | AAGAAGTATTATTAACAAC | ||
| -133 | 3 | ATTATTAACAACTTTTTAT | ||
| -75 | 3.1 | ATTTTAAAAATAAAACATT | ||
| -29 | 3 | ATCTAAATTAATATGCAAA | ||
| -1 | 3.5 | TTTGAATAATTTGTTCAAA | ||
| 15 | 3.2 | AAAAACGAAATATATCAAT | ||
| 31 | 3.1 | AATCAAAATACAAGTCAGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaA | ||||
| Ortholog function: Heme A synthase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0256 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22920 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1780 | -278 | 3.5 | ATTGTTAAAATTATGAAAT |
| -167 | 3.3 | ATTAAAAAAAAATTTAAAA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_2601 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1340 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: 10
Score: 3.2 Sequence: ATTTAGAAAACTTAAATTT
Locus tag: PMM0448
|
||||
| PMM0448 | 10 | 3.2 | ATTTAGAAAACTTAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaB | ||||
| Ortholog function: Protoheme IX farnesyltransferase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0255 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22910 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1781 | -41 | 4.1 | AATTATAACCAGTTTCAAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2600 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1339 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -184
Score: 3 Sequence: AAATAAAATATTACTCTAG
Position: -156
Score: 2.9 Sequence: TTTCACTCATAATAACAAT
Position: -152
Score: 3 Sequence: ACTCATAATAACAATAATA
Position: -149
Score: 3.3 Sequence: CATAATAACAATAATAATC
Position: -146
Score: 3.2 Sequence: AATAACAATAATAATCCCA
Position: -71
Score: 3.2 Sequence: GTTGAGAAATACATTTATA
Position: -29
Score: 3.1 Sequence: ATTTATTAACGTGTTAATT
Position: -1
Score: 3.9 Sequence: AATGACAAGTACAATAAAT
Locus tag: PMM0543
|
||||
| PMM0543 | -184 | 3 | AAATAAAATATTACTCTAG | |
| -156 | 2.9 | TTTCACTCATAATAACAAT | ||
| -152 | 3 | ACTCATAATAACAATAATA | ||
| -149 | 3.3 | CATAATAACAATAATAATC | ||
| -146 | 3.2 | AATAACAATAATAATCCCA | ||
| -71 | 3.2 | GTTGAGAAATACATTTATA | ||
| -29 | 3.1 | ATTTATTAACGTGTTAATT | ||
| -1 | 3.9 | AATGACAAGTACAATAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlL | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2347 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Synechocystis sp. PCC 6803 | slr0749 | -173 | 3.3 | ATTTTATTTTTGTCTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0791 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16230 | -150 | 2.8 | ATTTATATAATTTTTAAGC |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -144
Score: 2.9 Sequence: ATAAATTAGTTTAATTATT
Position: -141
Score: 3.8 Sequence: AATTAGTTTAATTATTCTT
Position: -138
Score: 3.5 Sequence: TAGTTTAATTATTCTTATT
Position: -135
Score: 3.3 Sequence: TTTAATTATTCTTATTAAA
Position: -95
Score: 3 Sequence: TTTTTTAAATGTATACATT
Position: -75
Score: 3.6 Sequence: TGTAAGAGAACTTATCAAT
Locus tag: PMM0545
|
||||
| PMM0545 | -144 | 2.9 | ATAAATTAGTTTAATTATT | |
| -141 | 3.8 | AATTAGTTTAATTATTCTT | ||
| -138 | 3.5 | TAGTTTAATTATTCTTATT | ||
| -135 | 3.3 | TTTAATTATTCTTATTAAA | ||
| -95 | 3 | TTTTTTAAATGTATACATT | ||
| -75 | 3.6 | TGTAAGAGAACTTATCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlN | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, subunit N | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2345 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Cyanothece sp. ATCC 51142 | cce_4534 | -118 | 3.7 | TTTGAGTTTTATTTAAAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0789 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16250 | -107 | 2.8 | ATTAAGTAATTCTTTATAT |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -98
Score: 3.1 Sequence: AATTAAAAAATTTTTTTAA
Position: -97
Score: 3.6 Sequence: ATTAAAAAATTTTTTTAAA
Position: -27
Score: 3 Sequence: GCTGGTAAAAATACTTAAA
Position: -17
Score: 3.3 Sequence: ATACTTAAAGAAAATCAAT
Locus tag: PMM0831
|
||||
| PMM0831 | -98 | 3.1 | AATTAAAAAATTTTTTTAA | |
| -97 | 3.6 | ATTAAAAAATTTTTTTAAA | ||
| -27 | 3 | GCTGGTAAAAATACTTAAA | ||
| -17 | 3.3 | ATACTTAAAGAAAATCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlH | ||||
| Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1018 | -57 | 3.8 | ATAGTTATAAATTTTTAAT |
| Cyanothece sp. ATCC 51142 | cce_4358 | -183 | 2.7 | AATAAATAATTTTTGTAAA |
| -138 | 2.3 | ATTTGTCAATATTTGTAAC | ||
| Cyanothece sp. PCC 8801 | PCC8801_4320 | -186 | 2.3 | ATTTGTCAATATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_12190 | -247 | 2.8 | ATTAAATATTAATTTTTGT |
| Nostoc sp. PCC 7120 | all4365 | -272 | 2.9 | GTTTTTTATTTTTTTCATC |
| -232 | 3 | AATATTAATTTTTCTTTAC | ||
| Trichodesmium erythraeum IMS101 | Tery_3224 | -65 | 3 | GTTTAAAATTTTTTGATAT |
|
Position: -179
Score: 2.9 Sequence: TTTTATTCTAGATGTCTAT
Position: -151
Score: 3 Sequence: TTTAAGAATTAATATAGAG
Position: -144
Score: 4.1 Sequence: ATTAATATAGAGTATTATT
Position: -138
Score: 3.4 Sequence: ATAGAGTATTATTACCTAA
Position: -127
Score: 3.8 Sequence: TTACCTAATTTTTAGCATT
Locus tag: PMM1157
|
||||
| PMM1157 | -179 | 2.9 | TTTTATTCTAGATGTCTAT | |
| -151 | 3 | TTTAAGAATTAATATAGAG | ||
| -144 | 4.1 | ATTAATATAGAGTATTATT | ||
| -138 | 3.4 | ATAGAGTATTATTACCTAA | ||
| -127 | 3.8 | TTACCTAATTTTTAGCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -341
Score: 3.1 Sequence: TTTAAGAAGTTCTCTTTAT
Position: -334
Score: 3.8 Sequence: AGTTCTCTTTATTATCAAT
Position: -267
Score: 2.9 Sequence: TAAAAAAAAATTTAAGATT
Position: -258
Score: 3.2 Sequence: ATTTAAGATTTATTTAATT
Position: -242
Score: 3 Sequence: ATTGAAATGAGTAAATATA
Position: -205
Score: 2.9 Sequence: AAAGGGATTCAATAGAAAT
Position: -185
Score: 3.4 Sequence: TTGAAAAGTAACAATCAAT
Position: -116
Score: 3.2 Sequence: TTTGGTAACGAAAATCTTA
Position: -110
Score: 3.5 Sequence: AACGAAAATCTTAAGTTTT
Position: -76
Score: 3.1 Sequence: CATAAAGACTACTATTAAT
Position: -42
Score: 3.1 Sequence: TGTGATAAATCTACTTAAG
Locus tag: PMM1524
|
||||
| PMM1524 | -341 | 3.1 | TTTAAGAAGTTCTCTTTAT | |
| -334 | 3.8 | AGTTCTCTTTATTATCAAT | ||
| -267 | 2.9 | TAAAAAAAAATTTAAGATT | ||
| -258 | 3.2 | ATTTAAGATTTATTTAATT | ||
| -242 | 3 | ATTGAAATGAGTAAATATA | ||
| -205 | 2.9 | AAAGGGATTCAATAGAAAT | ||
| -185 | 3.4 | TTGAAAAGTAACAATCAAT | ||
| -116 | 3.2 | TTTGGTAACGAAAATCTTA | ||
| -110 | 3.5 | AACGAAAATCTTAAGTTTT | ||
| -76 | 3.1 | CATAAAGACTACTATTAAT | ||
| -42 | 3.1 | TGTGATAAATCTACTTAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psaA | ||||
| Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1 | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1961 | -206 | 3.4 | AGTTTTAAATATTGTTAAT |
| Cyanothece sp. ATCC 51142 | cce_0989 | -205 | 3.4 | AATTTTAATTATTGTTAAG |
| Microcystis aeruginosa NIES-843 | MAE_47560 | -297 | 3.2 | ATTAATAAACTTTTGTAAA |
| Nostoc sp. PCC 7120 | alr5154 | -177 | 3.4 | ATTTTGAATTATTGTTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4669 | -80 | 4 | ATTGATAATTCTTTACAAC |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2049 | -296 | 3.3 | TCTTTGAATTATTGTTAAT |
| Gloeobacter violaceus PCC 7421 | gvip470 | -195 | 2.2 | TTTTTAAAAATTGTTAAGT |