Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Prochlorococcus marinus str. MIT 9312

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9312
Orthologous TF(s) PMT9312_0637
Regulated genes 9
Built upon 167 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9312
Locus tag Position Score Sequence
Position: -102
Score: 3.7
Sequence: ATTGTTTAAGACTGTTAAT
Position: -98
Score: 3.6
Sequence: TTTAAGACTGTTAATCAGT
Position: -81
Score: 4.1
Sequence: GTTGATAAAATTTGTTTAT
Position: -77
Score: 3
Sequence: ATAAAATTTGTTTATTTTT
Position: -50
Score: 3.5
Sequence: TTTCAAATTATATGTCTAT
Position: -1
Score: 3.2
Sequence: AATGGAAACAACTAATTTT
Locus tag: PMT9312_0323
PMT9312_0323 -102 3.7 ATTGTTTAAGACTGTTAAT
-98 3.6 TTTAAGACTGTTAATCAGT
-81 4.1 GTTGATAAAATTTGTTTAT
-77 3 ATAAAATTTGTTTATTTTT
-50 3.5 TTTCAAATTATATGTCTAT
-1 3.2 AATGGAAACAACTAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142 cce_0893 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2861 -49 3.8 ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120 asl0883 -90 3.5 ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab CYA_0642 -92 2.8 ATTAAAAATATGATTTAAA
Position: -239
Score: 3.7
Sequence: TATTTTAAAGATATTCAAT
Position: -201
Score: 3
Sequence: TTGTTAAAAGAAAATCATT
Position: -195
Score: 3.7
Sequence: AAAGAAAATCATTTAAATT
Position: -189
Score: 3.1
Sequence: AATCATTTAAATTTACAAC
Position: -155
Score: 3.1
Sequence: AAATAAAAGGAGTATTATT
Position: -149
Score: 3.3
Sequence: AAGGAGTATTATTAATAAC
Position: -139
Score: 3
Sequence: ATTAATAACTTTTTAGAGT
Position: -105
Score: 3.7
Sequence: AAAGATTAAATTAATAAAT
Position: -96
Score: 3.2
Sequence: ATTAATAAATTTTTTTTAA
Position: -94
Score: 3
Sequence: TAATAAATTTTTTTTAAAT
Position: -78
Score: 3
Sequence: AATTAAACATATTAATTTT
Position: -77
Score: 3.4
Sequence: ATTAAACATATTAATTTTT
Position: -74
Score: 3.8
Sequence: AAACATATTAATTTTTAAT
Position: -49
Score: 3
Sequence: TTAGTTTTTGAATCTAAAT
Position: -45
Score: 3
Sequence: TTTTTGAATCTAAATTATT
Position: -19
Score: 3.1
Sequence: ATATATAGGTTTTATCCAT
Position: -3
Score: 3.8
Sequence: CATGTGATTAATAACCAAT
Position: 3
Score: 3.7
Sequence: ATTAATAACCAATCTTATC
Position: 6
Score: 3.9
Sequence: AATAACCAATCTTATCAAT
Position: 22
Score: 3.7
Sequence: AATCAAAATATCTGCCAAT
Locus tag: PMT9312_0446
PMT9312_0446 -239 3.7 TATTTTAAAGATATTCAAT
-201 3 TTGTTAAAAGAAAATCATT
-195 3.7 AAAGAAAATCATTTAAATT
-189 3.1 AATCATTTAAATTTACAAC
-155 3.1 AAATAAAAGGAGTATTATT
-149 3.3 AAGGAGTATTATTAATAAC
-139 3 ATTAATAACTTTTTAGAGT
-105 3.7 AAAGATTAAATTAATAAAT
-96 3.2 ATTAATAAATTTTTTTTAA
-94 3 TAATAAATTTTTTTTAAAT
-78 3 AATTAAACATATTAATTTT
-77 3.4 ATTAAACATATTAATTTTT
-74 3.8 AAACATATTAATTTTTAAT
-49 3 TTAGTTTTTGAATCTAAAT
-45 3 TTTTTGAATCTAAATTATT
-19 3.1 ATATATAGGTTTTATCCAT
-3 3.8 CATGTGATTAATAACCAAT
3 3.7 ATTAATAACCAATCTTATC
6 3.9 AATAACCAATCTTATCAAT
22 3.7 AATCAAAATATCTGCCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: 14
Score: 3.4
Sequence: CTTGGAAAACTTTAACTAT
Position: 25
Score: 3
Sequence: TTAACTATAAATCTTCAAT
Locus tag: PMT9312_0447
PMT9312_0447 14 3.4 CTTGGAAAACTTTAACTAT
25 3 TTAACTATAAATCTTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaB
Ortholog function: Protoheme IX farnesyltransferase
Cyanothece sp. PCC 8801 PCC8801_0255 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22910 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1781 -41 4.1 AATTATAACCAGTTTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_2600 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1339 -30 2.6 ATTTAAATTATTTTATTGT
Position: -157
Score: 3
Sequence: TTTCACTCATATAATAAAT
Position: -98
Score: 3.1
Sequence: ATCTTTAATCTTAATAAAT
Position: -92
Score: 3.4
Sequence: AATCTTAATAAATAACTAT
Position: -71
Score: 3.6
Sequence: GTTGAGAAATGAATTCTAT
Position: -1
Score: 4.3
Sequence: AATGACAAGTACTATAAAT
Locus tag: PMT9312_0543
PMT9312_0543 -157 3 TTTCACTCATATAATAAAT
-98 3.1 ATCTTTAATCTTAATAAAT
-92 3.4 AATCTTAATAAATAACTAT
-71 3.6 GTTGAGAAATGAATTCTAT
-1 4.3 AATGACAAGTACTATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -140
Score: 4
Sequence: CTATTTAATAATTCTCATT
Position: -124
Score: 3.2
Sequence: ATTTAAGTATTTAAACATT
Position: -108
Score: 3
Sequence: ATTCATATAAGTTTTTTAA
Position: -97
Score: 3
Sequence: TTTTTTAAATGTGTGCATT
Position: -77
Score: 3.2
Sequence: TGTAAGAGAACTTATTAAT
Position: -64
Score: 3.1
Sequence: ATTAATTACTTTCTTAAAT
Position: -48
Score: 3
Sequence: AATTAAAAAGTTTATGCAA
Position: -17
Score: 3.1
Sequence: AGCTCTAAATATTTTTAAT
Locus tag: PMT9312_0545
PMT9312_0545 -140 4 CTATTTAATAATTCTCATT
-124 3.2 ATTTAAGTATTTAAACATT
-108 3 ATTCATATAAGTTTTTTAA
-97 3 TTTTTTAAATGTGTGCATT
-77 3.2 TGTAAGAGAACTTATTAAT
-64 3.1 ATTAATTACTTTCTTAAAT
-48 3 AATTAAAAAGTTTATGCAA
-17 3.1 AGCTCTAAATATTTTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase, subunit N
Synechococcus sp. PCC 7002 SYNPCC7002_A2345 -126 3.6 TTTTATAAAAACTCTAAGT
Cyanothece sp. ATCC 51142 cce_4534 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0789 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16250 -107 2.8 ATTAAGTAATTCTTTATAT
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -102
Score: 3
Sequence: TTTTGAAAAATTTTTTTTT
Position: -101
Score: 4.2
Sequence: TTTGAAAAATTTTTTTTTT
Position: -17
Score: 3.3
Sequence: ATACTTAAATAAAATCAAT
Locus tag: PMT9312_0969
PMT9312_0969 -102 3 TTTTGAAAAATTTTTTTTT
-101 4.2 TTTGAAAAATTTTTTTTTT
-17 3.3 ATACTTAAATAAAATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
Position: -159
Score: 3.7
Sequence: ATTCAGATAATTTAACAAA
Position: -82
Score: 2.9
Sequence: TTTCAGATATACAAATATT
Position: -43
Score: 3.2
Sequence: TTTGTTACAGTTTCTCCGT
Locus tag: PMT9312_1256
PMT9312_1256 -159 3.7 ATTCAGATAATTTAACAAA
-82 2.9 TTTCAGATATACAAATATT
-43 3.2 TTTGTTACAGTTTCTCCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -334
Score: 3.1
Sequence: ATCAAAAAATTTTATTTGT
Position: -267
Score: 3
Sequence: ATATAAAACAAATATAAAG
Position: -233
Score: 3.1
Sequence: TTGGGTAAAAATACTCTTA
Position: -196
Score: 3.2
Sequence: AATTAACAAAATATTCATA
Position: -182
Score: 3
Sequence: TCATATAGTAACAATCATT
Position: -78
Score: 3.4
Sequence: TTTCTTGAACATTATTATT
Position: -75
Score: 4
Sequence: CTTGAACATTATTATTAAA
Position: -52
Score: 3
Sequence: AGTCCAAGATTTGATCAAT
Position: -36
Score: 3.1
Sequence: AATCGGCTTTAATGTCAAT
Position: -26
Score: 3.7
Sequence: AATGTCAATTATTTTCGAG
Locus tag: PMT9312_1616
PMT9312_1616 -334 3.1 ATCAAAAAATTTTATTTGT
-267 3 ATATAAAACAAATATAAAG
-233 3.1 TTGGGTAAAAATACTCTTA
-196 3.2 AATTAACAAAATATTCATA
-182 3 TCATATAGTAACAATCATT
-78 3.4 TTTCTTGAACATTATTATT
-75 4 CTTGAACATTATTATTAAA
-52 3 AGTCCAAGATTTGATCAAT
-36 3.1 AATCGGCTTTAATGTCAAT
-26 3.7 AATGTCAATTATTTTCGAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT
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