Propagation of Fur regulog to Prochlorococcus marinus str. MIT 9312
| Source regulog: | Fur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Prochlorococcus marinus str. MIT 9312 |
| Orthologous TF(s) | PMT9312_0637 |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -102
Score: 3.7 Sequence: ATTGTTTAAGACTGTTAAT
Position: -98
Score: 3.6 Sequence: TTTAAGACTGTTAATCAGT
Position: -81
Score: 4.1 Sequence: GTTGATAAAATTTGTTTAT
Position: -77
Score: 3 Sequence: ATAAAATTTGTTTATTTTT
Position: -50
Score: 3.5 Sequence: TTTCAAATTATATGTCTAT
Position: -1
Score: 3.2 Sequence: AATGGAAACAACTAATTTT
Locus tag: PMT9312_0323
|
||||
| PMT9312_0323 | -102 | 3.7 | ATTGTTTAAGACTGTTAAT | |
| -98 | 3.6 | TTTAAGACTGTTAATCAGT | ||
| -81 | 4.1 | GTTGATAAAATTTGTTTAT | ||
| -77 | 3 | ATAAAATTTGTTTATTTTT | ||
| -50 | 3.5 | TTTCAAATTATATGTCTAT | ||
| -1 | 3.2 | AATGGAAACAACTAATTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbM | ||||
| Ortholog function: Photosystem II reaction center M protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0893 | -29 | 3 | TTTCTTATAATTTCTTAAC |
| Cyanothece sp. PCC 8801 | PCC8801_2861 | -49 | 3.8 | ATTGTAAAAAAATATTAAC |
| Nostoc sp. PCC 7120 | asl0883 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0642 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -239
Score: 3.7 Sequence: TATTTTAAAGATATTCAAT
Position: -201
Score: 3 Sequence: TTGTTAAAAGAAAATCATT
Position: -195
Score: 3.7 Sequence: AAAGAAAATCATTTAAATT
Position: -189
Score: 3.1 Sequence: AATCATTTAAATTTACAAC
Position: -155
Score: 3.1 Sequence: AAATAAAAGGAGTATTATT
Position: -149
Score: 3.3 Sequence: AAGGAGTATTATTAATAAC
Position: -139
Score: 3 Sequence: ATTAATAACTTTTTAGAGT
Position: -105
Score: 3.7 Sequence: AAAGATTAAATTAATAAAT
Position: -96
Score: 3.2 Sequence: ATTAATAAATTTTTTTTAA
Position: -94
Score: 3 Sequence: TAATAAATTTTTTTTAAAT
Position: -78
Score: 3 Sequence: AATTAAACATATTAATTTT
Position: -77
Score: 3.4 Sequence: ATTAAACATATTAATTTTT
Position: -74
Score: 3.8 Sequence: AAACATATTAATTTTTAAT
Position: -49
Score: 3 Sequence: TTAGTTTTTGAATCTAAAT
Position: -45
Score: 3 Sequence: TTTTTGAATCTAAATTATT
Position: -19
Score: 3.1 Sequence: ATATATAGGTTTTATCCAT
Position: -3
Score: 3.8 Sequence: CATGTGATTAATAACCAAT
Position: 3
Score: 3.7 Sequence: ATTAATAACCAATCTTATC
Position: 6
Score: 3.9 Sequence: AATAACCAATCTTATCAAT
Position: 22
Score: 3.7 Sequence: AATCAAAATATCTGCCAAT
Locus tag: PMT9312_0446
|
||||
| PMT9312_0446 | -239 | 3.7 | TATTTTAAAGATATTCAAT | |
| -201 | 3 | TTGTTAAAAGAAAATCATT | ||
| -195 | 3.7 | AAAGAAAATCATTTAAATT | ||
| -189 | 3.1 | AATCATTTAAATTTACAAC | ||
| -155 | 3.1 | AAATAAAAGGAGTATTATT | ||
| -149 | 3.3 | AAGGAGTATTATTAATAAC | ||
| -139 | 3 | ATTAATAACTTTTTAGAGT | ||
| -105 | 3.7 | AAAGATTAAATTAATAAAT | ||
| -96 | 3.2 | ATTAATAAATTTTTTTTAA | ||
| -94 | 3 | TAATAAATTTTTTTTAAAT | ||
| -78 | 3 | AATTAAACATATTAATTTT | ||
| -77 | 3.4 | ATTAAACATATTAATTTTT | ||
| -74 | 3.8 | AAACATATTAATTTTTAAT | ||
| -49 | 3 | TTAGTTTTTGAATCTAAAT | ||
| -45 | 3 | TTTTTGAATCTAAATTATT | ||
| -19 | 3.1 | ATATATAGGTTTTATCCAT | ||
| -3 | 3.8 | CATGTGATTAATAACCAAT | ||
| 3 | 3.7 | ATTAATAACCAATCTTATC | ||
| 6 | 3.9 | AATAACCAATCTTATCAAT | ||
| 22 | 3.7 | AATCAAAATATCTGCCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaA | ||||
| Ortholog function: Heme A synthase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0256 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22920 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1780 | -278 | 3.5 | ATTGTTAAAATTATGAAAT |
| -167 | 3.3 | ATTAAAAAAAAATTTAAAA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_2601 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1340 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: 14
Score: 3.4 Sequence: CTTGGAAAACTTTAACTAT
Position: 25
Score: 3 Sequence: TTAACTATAAATCTTCAAT
Locus tag: PMT9312_0447
|
||||
| PMT9312_0447 | 14 | 3.4 | CTTGGAAAACTTTAACTAT | |
| 25 | 3 | TTAACTATAAATCTTCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaB | ||||
| Ortholog function: Protoheme IX farnesyltransferase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0255 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22910 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1781 | -41 | 4.1 | AATTATAACCAGTTTCAAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2600 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1339 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -157
Score: 3 Sequence: TTTCACTCATATAATAAAT
Position: -98
Score: 3.1 Sequence: ATCTTTAATCTTAATAAAT
Position: -92
Score: 3.4 Sequence: AATCTTAATAAATAACTAT
Position: -71
Score: 3.6 Sequence: GTTGAGAAATGAATTCTAT
Position: -1
Score: 4.3 Sequence: AATGACAAGTACTATAAAT
Locus tag: PMT9312_0543
|
||||
| PMT9312_0543 | -157 | 3 | TTTCACTCATATAATAAAT | |
| -98 | 3.1 | ATCTTTAATCTTAATAAAT | ||
| -92 | 3.4 | AATCTTAATAAATAACTAT | ||
| -71 | 3.6 | GTTGAGAAATGAATTCTAT | ||
| -1 | 4.3 | AATGACAAGTACTATAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlL | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2347 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Synechocystis sp. PCC 6803 | slr0749 | -173 | 3.3 | ATTTTATTTTTGTCTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0791 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16230 | -150 | 2.8 | ATTTATATAATTTTTAAGC |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -140
Score: 4 Sequence: CTATTTAATAATTCTCATT
Position: -124
Score: 3.2 Sequence: ATTTAAGTATTTAAACATT
Position: -108
Score: 3 Sequence: ATTCATATAAGTTTTTTAA
Position: -97
Score: 3 Sequence: TTTTTTAAATGTGTGCATT
Position: -77
Score: 3.2 Sequence: TGTAAGAGAACTTATTAAT
Position: -64
Score: 3.1 Sequence: ATTAATTACTTTCTTAAAT
Position: -48
Score: 3 Sequence: AATTAAAAAGTTTATGCAA
Position: -17
Score: 3.1 Sequence: AGCTCTAAATATTTTTAAT
Locus tag: PMT9312_0545
|
||||
| PMT9312_0545 | -140 | 4 | CTATTTAATAATTCTCATT | |
| -124 | 3.2 | ATTTAAGTATTTAAACATT | ||
| -108 | 3 | ATTCATATAAGTTTTTTAA | ||
| -97 | 3 | TTTTTTAAATGTGTGCATT | ||
| -77 | 3.2 | TGTAAGAGAACTTATTAAT | ||
| -64 | 3.1 | ATTAATTACTTTCTTAAAT | ||
| -48 | 3 | AATTAAAAAGTTTATGCAA | ||
| -17 | 3.1 | AGCTCTAAATATTTTTAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlN | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, subunit N | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2345 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Cyanothece sp. ATCC 51142 | cce_4534 | -118 | 3.7 | TTTGAGTTTTATTTAAAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0789 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16250 | -107 | 2.8 | ATTAAGTAATTCTTTATAT |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -102
Score: 3 Sequence: TTTTGAAAAATTTTTTTTT
Position: -101
Score: 4.2 Sequence: TTTGAAAAATTTTTTTTTT
Position: -17
Score: 3.3 Sequence: ATACTTAAATAAAATCAAT
Locus tag: PMT9312_0969
|
||||
| PMT9312_0969 | -102 | 3 | TTTTGAAAAATTTTTTTTT | |
| -101 | 4.2 | TTTGAAAAATTTTTTTTTT | ||
| -17 | 3.3 | ATACTTAAATAAAATCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlH | ||||
| Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1018 | -57 | 3.8 | ATAGTTATAAATTTTTAAT |
| Cyanothece sp. ATCC 51142 | cce_4358 | -183 | 2.7 | AATAAATAATTTTTGTAAA |
| -138 | 2.3 | ATTTGTCAATATTTGTAAC | ||
| Cyanothece sp. PCC 8801 | PCC8801_4320 | -186 | 2.3 | ATTTGTCAATATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_12190 | -247 | 2.8 | ATTAAATATTAATTTTTGT |
| Nostoc sp. PCC 7120 | all4365 | -272 | 2.9 | GTTTTTTATTTTTTTCATC |
| -232 | 3 | AATATTAATTTTTCTTTAC | ||
| Trichodesmium erythraeum IMS101 | Tery_3224 | -65 | 3 | GTTTAAAATTTTTTGATAT |
|
Position: -159
Score: 3.7 Sequence: ATTCAGATAATTTAACAAA
Position: -82
Score: 2.9 Sequence: TTTCAGATATACAAATATT
Position: -43
Score: 3.2 Sequence: TTTGTTACAGTTTCTCCGT
Locus tag: PMT9312_1256
|
||||
| PMT9312_1256 | -159 | 3.7 | ATTCAGATAATTTAACAAA | |
| -82 | 2.9 | TTTCAGATATACAAATATT | ||
| -43 | 3.2 | TTTGTTACAGTTTCTCCGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -334
Score: 3.1 Sequence: ATCAAAAAATTTTATTTGT
Position: -267
Score: 3 Sequence: ATATAAAACAAATATAAAG
Position: -233
Score: 3.1 Sequence: TTGGGTAAAAATACTCTTA
Position: -196
Score: 3.2 Sequence: AATTAACAAAATATTCATA
Position: -182
Score: 3 Sequence: TCATATAGTAACAATCATT
Position: -78
Score: 3.4 Sequence: TTTCTTGAACATTATTATT
Position: -75
Score: 4 Sequence: CTTGAACATTATTATTAAA
Position: -52
Score: 3 Sequence: AGTCCAAGATTTGATCAAT
Position: -36
Score: 3.1 Sequence: AATCGGCTTTAATGTCAAT
Position: -26
Score: 3.7 Sequence: AATGTCAATTATTTTCGAG
Locus tag: PMT9312_1616
|
||||
| PMT9312_1616 | -334 | 3.1 | ATCAAAAAATTTTATTTGT | |
| -267 | 3 | ATATAAAACAAATATAAAG | ||
| -233 | 3.1 | TTGGGTAAAAATACTCTTA | ||
| -196 | 3.2 | AATTAACAAAATATTCATA | ||
| -182 | 3 | TCATATAGTAACAATCATT | ||
| -78 | 3.4 | TTTCTTGAACATTATTATT | ||
| -75 | 4 | CTTGAACATTATTATTAAA | ||
| -52 | 3 | AGTCCAAGATTTGATCAAT | ||
| -36 | 3.1 | AATCGGCTTTAATGTCAAT | ||
| -26 | 3.7 | AATGTCAATTATTTTCGAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psaA | ||||
| Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1 | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1961 | -206 | 3.4 | AGTTTTAAATATTGTTAAT |
| Cyanothece sp. ATCC 51142 | cce_0989 | -205 | 3.4 | AATTTTAATTATTGTTAAG |
| Microcystis aeruginosa NIES-843 | MAE_47560 | -297 | 3.2 | ATTAATAAACTTTTGTAAA |
| Nostoc sp. PCC 7120 | alr5154 | -177 | 3.4 | ATTTTGAATTATTGTTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4669 | -80 | 4 | ATTGATAATTCTTTACAAC |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2049 | -296 | 3.3 | TCTTTGAATTATTGTTAAT |
| Gloeobacter violaceus PCC 7421 | gvip470 | -195 | 2.2 | TTTTTAAAAATTGTTAAGT |