Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Prochlorococcus marinus str. MIT 9301

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9301
Orthologous TF(s) null
Regulated genes 8
Built upon 167 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9301
Locus tag Position Score Sequence
Position: -104
Score: 3.7
Sequence: ATTGTTTAAGACTGTTAAT
Position: -100
Score: 3.6
Sequence: TTTAAGACTGTTAATCAGT
Position: -80
Score: 3.3
Sequence: TATGAAATTTGTTTATTTT
Position: -79
Score: 3
Sequence: ATGAAATTTGTTTATTTTT
Position: -36
Score: 3.2
Sequence: TATAGTCTTATTACTCAAT
Position: -1
Score: 3.2
Sequence: AATGGAAACAACTAATTTT
Locus tag: null
null -104 3.7 ATTGTTTAAGACTGTTAAT
-100 3.6 TTTAAGACTGTTAATCAGT
-80 3.3 TATGAAATTTGTTTATTTT
-79 3 ATGAAATTTGTTTATTTTT
-36 3.2 TATAGTCTTATTACTCAAT
-1 3.2 AATGGAAACAACTAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142 cce_0893 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2861 -49 3.8 ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120 asl0883 -90 3.5 ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab CYA_0642 -92 2.8 ATTAAAAATATGATTTAAA
Position: -239
Score: 3.1
Sequence: TATTTTCAAGATATTCAAT
Position: -195
Score: 3.6
Sequence: ATAGAAAAACATTTAAATT
Position: -152
Score: 2.9
Sequence: TAAAAGACGTATTATTAAT
Position: -139
Score: 3
Sequence: ATTAATAACTTTTTAGAGT
Position: -101
Score: 3.3
Sequence: ATTAAATTAGAAAATTATT
Position: -97
Score: 3.4
Sequence: AATTAGAAAATTATTTTTT
Position: -95
Score: 3.3
Sequence: TTAGAAAATTATTTTTTAA
Position: -77
Score: 3
Sequence: AATTAAACATATTAATTTT
Position: -76
Score: 3.4
Sequence: ATTAAACATATTAATTTTT
Position: -73
Score: 3.8
Sequence: AAACATATTAATTTTTAAT
Position: -48
Score: 3
Sequence: TTGGTTTTTGAATCTAATT
Position: -42
Score: 3.1
Sequence: TTTGAATCTAATTTATTAT
Position: -26
Score: 3.3
Sequence: TATGCAAAATAATAGGTTT
Position: -19
Score: 3.6
Sequence: AATAATAGGTTTTATCCAT
Position: -3
Score: 3.2
Sequence: CATTTGATTAATAACCAAT
Position: 6
Score: 3.1
Sequence: AATAACCAATTATATAAAT
Position: 22
Score: 3.7
Sequence: AATCAAAATATCTGACAAT
Locus tag: null
null -239 3.1 TATTTTCAAGATATTCAAT
-195 3.6 ATAGAAAAACATTTAAATT
-152 2.9 TAAAAGACGTATTATTAAT
-139 3 ATTAATAACTTTTTAGAGT
-101 3.3 ATTAAATTAGAAAATTATT
-97 3.4 AATTAGAAAATTATTTTTT
-95 3.3 TTAGAAAATTATTTTTTAA
-77 3 AATTAAACATATTAATTTT
-76 3.4 ATTAAACATATTAATTTTT
-73 3.8 AAACATATTAATTTTTAAT
-48 3 TTGGTTTTTGAATCTAATT
-42 3.1 TTTGAATCTAATTTATTAT
-26 3.3 TATGCAAAATAATAGGTTT
-19 3.6 AATAATAGGTTTTATCCAT
-3 3.2 CATTTGATTAATAACCAAT
6 3.1 AATAACCAATTATATAAAT
22 3.7 AATCAAAATATCTGACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: -166
Score: 3
Sequence: AGTCATGAGTATTTTCACT
Position: -113
Score: 3.2
Sequence: TATAAGAACATATATCACA
Position: -111
Score: 3.3
Sequence: TAAGAACATATATCACATT
Position: -84
Score: 2.9
Sequence: AATTAAATACATATTTGTT
Position: -68
Score: 3
Sequence: GTTTAGAAACATATTTCAT
Position: -35
Score: 3.1
Sequence: CAAGAATATAAATAATAAT
Position: -25
Score: 3.1
Sequence: AATAATAATGTGTTTTAAG
Position: -1
Score: 4.3
Sequence: AATGACAAGTACTATAAAT
Locus tag: null
null -166 3 AGTCATGAGTATTTTCACT
-113 3.2 TATAAGAACATATATCACA
-111 3.3 TAAGAACATATATCACATT
-84 2.9 AATTAAATACATATTTGTT
-68 3 GTTTAGAAACATATTTCAT
-35 3.1 CAAGAATATAAATAATAAT
-25 3.1 AATAATAATGTGTTTTAAG
-1 4.3 AATGACAAGTACTATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -141
Score: 3.2
Sequence: TTTTTTCATAATTTCCATT
Position: -125
Score: 3.2
Sequence: ATTTAAGTATTTAAACATT
Position: -109
Score: 3
Sequence: ATTCATATAAGTTTTTTAA
Position: -78
Score: 3.2
Sequence: TGTAAGAGAACTTATTAAT
Position: -65
Score: 3.1
Sequence: ATTAATTACTTTCTTAAAT
Position: -49
Score: 3
Sequence: AATTAAAAAGTTTATGCAA
Position: -1
Score: 3.2
Sequence: AATGAGTAAAGTTGAATTT
Locus tag: null
null -141 3.2 TTTTTTCATAATTTCCATT
-125 3.2 ATTTAAGTATTTAAACATT
-109 3 ATTCATATAAGTTTTTTAA
-78 3.2 TGTAAGAGAACTTATTAAT
-65 3.1 ATTAATTACTTTCTTAAAT
-49 3 AATTAAAAAGTTTATGCAA
-1 3.2 AATGAGTAAAGTTGAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase, subunit N
Synechococcus sp. PCC 7002 SYNPCC7002_A2345 -126 3.6 TTTTATAAAAACTCTAAGT
Cyanothece sp. ATCC 51142 cce_4534 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0789 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16250 -107 2.8 ATTAAGTAATTCTTTATAT
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -101
Score: 3.2
Sequence: TTTTTAAAAAATTTTTTTT
Position: -100
Score: 3.6
Sequence: TTTTAAAAAATTTTTTTTT
Position: -17
Score: 3.3
Sequence: ATACTTAAAGAAAATCAAT
Locus tag: null
null -101 3.2 TTTTTAAAAAATTTTTTTT
-100 3.6 TTTTAAAAAATTTTTTTTT
-17 3.3 ATACTTAAAGAAAATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
Position: -160
Score: 3.7
Sequence: ATTCAGATAATTTAACAAA
Locus tag: null
null -160 3.7 ATTCAGATAATTTAACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -325
Score: 3.4
Sequence: ATTGATAGTTACGATGAAA
Position: -255
Score: 2.9
Sequence: ATTTAAGAAATTTATTTAA
Position: -254
Score: 3
Sequence: TTTAAGAAATTTATTTAAA
Position: -252
Score: 3.3
Sequence: TAAGAAATTTATTTAAAAT
Position: -234
Score: 3.3
Sequence: TTTGAGTAAAAATACTCAT
Position: -233
Score: 3
Sequence: TTGAGTAAAAATACTCATA
Position: -196
Score: 3.4
Sequence: ATTTAACAAAATATTCATA
Position: -182
Score: 3
Sequence: TCATATAGTAACAATCATT
Position: -113
Score: 3
Sequence: TTTGAAACGAATATTTAAA
Position: -78
Score: 3.9
Sequence: TTTCTTGAACATTATCATT
Position: -75
Score: 3.3
Sequence: CTTGAACATTATCATTAAA
Position: -36
Score: 3.1
Sequence: AATCGGCTTTAATGTCAAT
Position: -26
Score: 3.7
Sequence: AATGTCAATTATTTTCGAG
Locus tag: null
null -325 3.4 ATTGATAGTTACGATGAAA
-255 2.9 ATTTAAGAAATTTATTTAA
-254 3 TTTAAGAAATTTATTTAAA
-252 3.3 TAAGAAATTTATTTAAAAT
-234 3.3 TTTGAGTAAAAATACTCAT
-233 3 TTGAGTAAAAATACTCATA
-196 3.4 ATTTAACAAAATATTCATA
-182 3 TCATATAGTAACAATCATT
-113 3 TTTGAAACGAATATTTAAA
-78 3.9 TTTCTTGAACATTATCATT
-75 3.3 CTTGAACATTATCATTAAA
-36 3.1 AATCGGCTTTAATGTCAAT
-26 3.7 AATGTCAATTATTTTCGAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT
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