Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Prochlorococcus marinus str. MIT 9515

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9515
Orthologous TF(s) null
Regulated genes 8
Built upon 167 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9515
Locus tag Position Score Sequence
Position: -102
Score: 3.7
Sequence: ATTGTTTAAGACTGTTAAT
Position: -98
Score: 3
Sequence: TTTAAGACTGTTAATGAGT
Position: -61
Score: 3.1
Sequence: TTTCCACTTAATTTCCATT
Position: -50
Score: 3
Sequence: TTTCCATTTAAATGTCTAT
Position: -31
Score: 3.5
Sequence: AGTCATAATATTATTGAAT
Locus tag: null
null -102 3.7 ATTGTTTAAGACTGTTAAT
-98 3 TTTAAGACTGTTAATGAGT
-61 3.1 TTTCCACTTAATTTCCATT
-50 3 TTTCCATTTAAATGTCTAT
-31 3.5 AGTCATAATATTATTGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142 cce_0893 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2861 -49 3.8 ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120 asl0883 -90 3.5 ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab CYA_0642 -92 2.8 ATTAAAAATATGATTTAAA
Position: 30
Score: 2.9
Sequence: AATAACAAGAGTCTTCAAC
Locus tag: null
null 30 2.9 AATAACAAGAGTCTTCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxA
Ortholog function: Cytochrome c oxidase, subunit I
Cyanothece sp. ATCC 51142 cce_1976 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0568 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22940 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr0951 -134 3.7 TTTACTCAAGATTATTAAT
Position: -329
Score: 3.2
Sequence: TTAGAAAAAAAGTAGTTAT
Position: -328
Score: 3
Sequence: TAGAAAAAAAGTAGTTATT
Position: -325
Score: 3.2
Sequence: AAAAAAAGTAGTTATTTAT
Position: -316
Score: 3.2
Sequence: AGTTATTTATATTTTCAAG
Position: -305
Score: 3.3
Sequence: TTTTCAAGATATTCTTTTT
Position: -301
Score: 3.1
Sequence: CAAGATATTCTTTTTTTTT
Position: -280
Score: 3
Sequence: TTTTGCATCGTTTGTTAAT
Position: -264
Score: 3.1
Sequence: AATGGAAAATTATTGAAAT
Position: -263
Score: 3.9
Sequence: ATGGAAAATTATTGAAATT
Position: -257
Score: 3.2
Sequence: AATTATTGAAATTCACAAC
Position: -220
Score: 3.6
Sequence: TAAAAGAACTGTTATCAGT
Position: -170
Score: 3.3
Sequence: ATTAAAAAAACAAATAAAT
Position: -153
Score: 3.2
Sequence: ATTTTTAAAATAAAACATT
Position: -129
Score: 3.1
Sequence: TTAATTAATGTTTGTTAAT
Position: -79
Score: 4.1
Sequence: TTTGATTAACTTGTTCAAT
Position: -63
Score: 3.2
Sequence: AATAACAAAATACATCAAA
Position: -40
Score: 3
Sequence: ATTCAAATCAATTTTTCTG
Position: -19
Score: 3
Sequence: ATTGGGAAATCATTGCGTT
Position: -8
Score: 3.2
Sequence: ATTGCGTTTTGGCATTAAT
Position: 5
Score: 3.1
Sequence: ATTAATAGCTTTAATAGTT
Locus tag: null
null -329 3.2 TTAGAAAAAAAGTAGTTAT
-328 3 TAGAAAAAAAGTAGTTATT
-325 3.2 AAAAAAAGTAGTTATTTAT
-316 3.2 AGTTATTTATATTTTCAAG
-305 3.3 TTTTCAAGATATTCTTTTT
-301 3.1 CAAGATATTCTTTTTTTTT
-280 3 TTTTGCATCGTTTGTTAAT
-264 3.1 AATGGAAAATTATTGAAAT
-263 3.9 ATGGAAAATTATTGAAATT
-257 3.2 AATTATTGAAATTCACAAC
-220 3.6 TAAAAGAACTGTTATCAGT
-170 3.3 ATTAAAAAAACAAATAAAT
-153 3.2 ATTTTTAAAATAAAACATT
-129 3.1 TTAATTAATGTTTGTTAAT
-79 4.1 TTTGATTAACTTGTTCAAT
-63 3.2 AATAACAAAATACATCAAA
-40 3 ATTCAAATCAATTTTTCTG
-19 3 ATTGGGAAATCATTGCGTT
-8 3.2 ATTGCGTTTTGGCATTAAT
5 3.1 ATTAATAGCTTTAATAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: -188
Score: 3
Sequence: CTACAAATAAACTATCATC
Position: -156
Score: 2.9
Sequence: TTAGACTCATAATATAATT
Position: -149
Score: 3.4
Sequence: CATAATATAATTAATAAAT
Position: -98
Score: 3.4
Sequence: ATCTTTAATCATAATAAAT
Position: -92
Score: 4
Sequence: AATCATAATAAATAACTAT
Position: -1
Score: 4.3
Sequence: AATGACAAGTACTATAAAT
Locus tag: null
null -188 3 CTACAAATAAACTATCATC
-156 2.9 TTAGACTCATAATATAATT
-149 3.4 CATAATATAATTAATAAAT
-98 3.4 ATCTTTAATCATAATAAAT
-92 4 AATCATAATAAATAACTAT
-1 4.3 AATGACAAGTACTATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -156
Score: 3.1
Sequence: AATTTTAATAAAAAGAATT
Position: -153
Score: 3.3
Sequence: TTTAATAAAAAGAATTAGT
Position: -150
Score: 3.6
Sequence: AATAAAAAGAATTAGTTTT
Position: -147
Score: 3.3
Sequence: AAAAAGAATTAGTTTTATT
Position: -144
Score: 3.2
Sequence: AAGAATTAGTTTTATTATT
Position: -141
Score: 3.7
Sequence: AATTAGTTTTATTATTCTT
Position: -138
Score: 3.1
Sequence: TAGTTTTATTATTCTTATT
Position: -135
Score: 3.3
Sequence: TTTTATTATTCTTATTAAA
Position: -106
Score: 3
Sequence: ATTCATATAAGTTTTTTAA
Position: -95
Score: 3
Sequence: TTTTTTAAATGTATACATT
Position: -75
Score: 3.6
Sequence: TGTAAGAGAACTTATCAAT
Position: -1
Score: 3
Sequence: AATGAGTAAAGTAGATTTT
Locus tag: null
null -156 3.1 AATTTTAATAAAAAGAATT
-153 3.3 TTTAATAAAAAGAATTAGT
-150 3.6 AATAAAAAGAATTAGTTTT
-147 3.3 AAAAAGAATTAGTTTTATT
-144 3.2 AAGAATTAGTTTTATTATT
-141 3.7 AATTAGTTTTATTATTCTT
-138 3.1 TAGTTTTATTATTCTTATT
-135 3.3 TTTTATTATTCTTATTAAA
-106 3 ATTCATATAAGTTTTTTAA
-95 3 TTTTTTAAATGTATACATT
-75 3.6 TGTAAGAGAACTTATCAAT
-1 3 AATGAGTAAAGTAGATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase, subunit N
Synechococcus sp. PCC 7002 SYNPCC7002_A2345 -126 3.6 TTTTATAAAAACTCTAAGT
Cyanothece sp. ATCC 51142 cce_4534 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0789 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16250 -107 2.8 ATTAAGTAATTCTTTATAT
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -171
Score: 3
Sequence: GCTGGTAAAAATACTTAAA
Position: -161
Score: 3.3
Sequence: ATACTTAAAGAAAATCAAT
Position: -102
Score: 3.1
Sequence: GTTGAGGATAACAAACATA
Position: 18
Score: 3.1
Sequence: ATAGATCTTAGTGGTTATT
Locus tag: null
null -171 3 GCTGGTAAAAATACTTAAA
-161 3.3 ATACTTAAAGAAAATCAAT
-102 3.1 GTTGAGGATAACAAACATA
18 3.1 ATAGATCTTAGTGGTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
Position: -169
Score: 3.2
Sequence: AAAGGCACATTTTATTAAT
Position: -160
Score: 2.9
Sequence: TTTTATTAATTTAACAAAT
Position: -131
Score: 3.4
Sequence: ATTATTACTTATTTTCAAA
Position: -83
Score: 3
Sequence: TTTCATATATACAAATATT
Locus tag: null
null -169 3.2 AAAGGCACATTTTATTAAT
-160 2.9 TTTTATTAATTTAACAAAT
-131 3.4 ATTATTACTTATTTTCAAA
-83 3 TTTCATATATACAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -326
Score: 3.8
Sequence: TTTGATATCTTCTAGAAAT
Position: -315
Score: 3
Sequence: CTAGAAATTATATCTTGTT
Position: -267
Score: 2.9
Sequence: TAAAAAAAAATTTAAGATT
Position: -258
Score: 3.4
Sequence: ATTTAAGATTTTTATGAAA
Position: -257
Score: 3.1
Sequence: TTTAAGATTTTTATGAAAT
Position: -246
Score: 3.2
Sequence: TATGAAATATTTTGGGTAT
Position: -159
Score: 3
Sequence: TTTGTTACTTTCTCGCATG
Position: -115
Score: 3.2
Sequence: TTTGGTAACGAAAATCTTA
Position: -63
Score: 3.2
Sequence: ATTAAAAAGTAGGCTTATT
Locus tag: null
null -326 3.8 TTTGATATCTTCTAGAAAT
-315 3 CTAGAAATTATATCTTGTT
-267 2.9 TAAAAAAAAATTTAAGATT
-258 3.4 ATTTAAGATTTTTATGAAA
-257 3.1 TTTAAGATTTTTATGAAAT
-246 3.2 TATGAAATATTTTGGGTAT
-159 3 TTTGTTACTTTCTCGCATG
-115 3.2 TTTGGTAACGAAAATCTTA
-63 3.2 ATTAAAAAGTAGGCTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT