Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LexA regulog to Prochlorococcus marinus str. MIT 9515

Reference regulog properties
Source regulog: LexA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9515
Orthologous TF(s) null
Regulated genes 4
Built upon 26 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9515
Locus tag Position Score Sequence
Position: -7
Score: 4.7
Sequence: AGTATATATGTACT
Locus tag: null
null -7 4.7 AGTATATATGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: umuD
Ortholog function: DNA polymerase V, subunit D
Prochlorococcus marinus str. MIT 9313 PMT0635 -20 4.4 GGAACGGGTGTACT
Synechococcus sp. WH 8102 SYNW1044 -39 4.6 AATACATCAGTACT
Position: -15
Score: 4.6
Sequence: GGTACAAATGTATT
Locus tag: null
null -15 4.6 GGTACAAATGTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88)
Cyanothece sp. ATCC 51142 cce_1899 -32 4.7 AGTACCCATGTTCT
Cyanothece sp. PCC 8801 PCC8801_2186 -75 4.3 AGTACTTATGTTCG
Cyanothece sp. PCC 7425 Cyan7425_1233 -131 4.5 GATACAAGTGTTCT
Nostoc sp. PCC 7120 alr4908 -47 4.8 AGTACTAATGTTCT
Prochlorococcus marinus str. MIT 9313 PMT0380 -28 4.6 GGTACACATGTATT
Position: -95
Score: 5
Sequence: AGTACGCATGTACT
Locus tag: null
null -95 5 AGTACGCATGTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Synechococcus sp. PCC 7002 SYNPCC7002_A0426 -64 4.3 AGTACGATTGAACT
Cyanothece sp. ATCC 51142 cce_4639 -47 4.8 AATACTTTTGTACT
Cyanothece sp. PCC 7425 Cyan7425_1671 -39 4.5 AGTACGGATATACT
Microcystis aeruginosa NIES-843 MAE_16070 -40 4.6 CATACTGCTGTACT
Nostoc sp. PCC 7120 all3272 -66 4.6 AGTATATCTGTTCT
Prochlorococcus marinus str. MIT 9313 PMT1727 -145 4.9 GGTACGTCTGTACT
Synechococcus sp. WH 8102 SYNW2062 -78 4.7 CGTACGCCTGTACT
Position: -111
Score: 3.8
Sequence: AATATATCTATTCT
Locus tag: null
null -111 3.8 AATATATCTATTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ssb
Ortholog function: single-stranded DNA-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0119 -25 3.9 AGAACAGTTGTATG
Cyanothece sp. PCC 7425 Cyan7425_1469 -18 4.1 AGTACAGGTAAACT
Microcystis aeruginosa NIES-843 MAE_39060 -33 4.3 CATACTATTGTACT
Nostoc sp. PCC 7120 alr0088 -28 5.1 AGTACTTATGTACT
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