Propagation of Crp regulog to Cyanothece sp. CCY 0110

Reference regulog properties
Source regulog:	Crp - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	repressor (activator)
Biological process:
Effector:	Cyclic 3',5'-AMP
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Cyanothece sp. CCY 0110
Orthologous TF(s)	CY0110_10482
Regulated genes	19

Built upon 106 sites [see more]

Predicted regulatory interactions in *Cyanothece sp. CCY 0110*
	Locus tag	Position	Score	Sequence
Position: -76 Score: 4.5 Sequence: TGTGAGTTTGATCACC Locus tag: CY0110_10297
	CY0110_10297	-76	4.5	TGTGAGTTTGATCACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: slr1503
Ortholog function: Predicted aldo/keto reductase
Synechocystis sp. PCC 6803	slr1503	-1	3.8	TATGACAATTAGCACC
Cyanothece sp. ATCC 51142	cce_2512	-72	4.1	TGTGAGTTTTGTCACG
Cyanothece sp. PCC 8801	PCC8801_0019	-35	4.6	TGTGAGCTAAATCACT
Trichodesmium erythraeum IMS101	Tery_2155	-99	3.9	CATGGTTTTAATCATA

Position: -129 Score: 3.3 Sequence: ATTAATAAAAGGCACT Position: -94 Score: 3 Sequence: TGTGGTAAAAGTTGCA Locus tag: CY0110_03374
	CY0110_03374	-129	3.3	ATTAATAAAAGGCACT
		-94	3	TGTGGTAAAAGTTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
Cyanothece sp. ATCC 51142	cce_1975	-78	3.7	TGTGATAAAAAAGCCA
Nostoc sp. PCC 7120	alr2516	-222	3.1	TCTGGAATAATTCCCC

Position: -123 Score: 4 Sequence: GGTGGTATAAATGACA Locus tag: CY0110_22387
	CY0110_22387	-123	4	GGTGGTATAAATGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifB
Ortholog function: FeMo nitrogenase cofactor biosynthesis protein
Cyanothece sp. ATCC 51142	cce_0554	-123	4	GGTGGTATAAATGACA
Cyanothece sp. PCC 7425	Cyan7425_2361	-40	3.9	ACTGTTATAAAGCACC
Nostoc sp. PCC 7120	all1517	-299	3.1	ACTGCTATAAATCTTA
Trichodesmium erythraeum IMS101	Tery_4133	-356	3.7	TATGACTTATAGCATG

Position: -307 Score: 4 Sequence: TGTGATTGTTATCAAG Position: -148 Score: 4.1 Sequence: TGTGATTGTTATCAAC Locus tag: CY0110_24741
	CY0110_24741	-307	4	TGTGATTGTTATCAAG
		-148	4.1	TGTGATTGTTATCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppa
Ortholog function: inorganic pyrophosphatase
Cyanothece sp. ATCC 51142	cce_4329	-265	4.5	TGTGATTATTATCAAA
		-104	4.4	TGTGATTATTATCAAC
Cyanothece sp. PCC 8801	PCC8801_2042	-177	4	TGTGATACTCATCATA
Cyanothece sp. PCC 7425	Cyan7425_1645	-273	3.7	ACTGATTAAGGGCACT
Nostoc sp. PCC 7120	all3570	-160	3.7	TGTGATATTTTTCCAC
Trichodesmium erythraeum IMS101	Tery_1519	-237	3.9	AATGATAGAGTTCACG

Position: -278 Score: 4 Sequence: TGTCAACTAGATCACA Locus tag: CY0110_25086
	CY0110_25086	-278	4	TGTCAACTAGATCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rlpA
Ortholog function: Predicted lipoprotein A
Cyanothece sp. ATCC 51142	cce_3687	-215	4	TGTTAACTAGATCACA
Cyanothece sp. PCC 8801	PCC8801_1079	-239	3.8	GGTGAAATTAGGCAAA
Cyanothece sp. PCC 7425	Cyan7425_3340	-328	4.2	CGTGATTCGGATCACA
Thermosynechococcus elongatus BP-1	tlr0333	-317	4.8	GGTGATCTGAGTCACA

Position: -112 Score: 4 Sequence: GGTGAATTTAAGCATA Locus tag: CY0110_00350
	CY0110_00350	-112	4	GGTGAATTTAAGCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sll1708
Ortholog function: Two component transcriptional regulator, LuxR family
Synechocystis sp. PCC 6803	sll1708	-77	4.4	CGTGATAGTAATCACC
Cyanothece sp. ATCC 51142	cce_2365	-1	3.8	GGTGAATTTAAGCATG

Position: 5 Score: 4.1 Sequence: AATGTTTAAAGTCACC Position: 24 Score: 3.7 Sequence: TGTGTTCCCAGTCAAA Locus tag: CY0110_30563
	CY0110_30563	5	4.1	AATGTTTAAAGTCACC
		24	3.7	TGTGTTCCCAGTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcC
Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated
Cyanothece sp. ATCC 51142	cce_2911	5	4.1	AATGTTTAAAGTCACC
Cyanothece sp. PCC 8801	PCC8801_2788	5	3.9	GATGTTTAAAGTCACC
Microcystis aeruginosa NIES-843	MAE_10240	5	4.1	GATGTTCAAAATCACC
Trichodesmium erythraeum IMS101	Tery_3647	5	4.2	AATGTTTAAGATCACA
Synechococcus sp. JA-3-3Ab	CYA_2225	5	3.7	CATGTTTAAGATCACG
Synechococcus sp. WH 8102	SYNW0483	5	3.9	GTTGTTCAAAGTCACC
Thermosynechococcus elongatus BP-1	null	-233	3.6	CATGAAAGAAGTCACC

Position: -23 Score: 3.6 Sequence: CATGATTTTATTCAGA Locus tag: CY0110_15435
	CY0110_15435	-23	3.6	CATGATTTTATTCAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Cyanothece sp. ATCC 51142	cce_0800	-23	3.6	CATGATTTTATTCAGA
Cyanothece sp. PCC 8801	PCC8801_3887	-203	4.3	GGTGACAGAAATCAAA
Microcystis aeruginosa NIES-843	MAE_02800	-44	3.6	TTTGATTATGATCGCC
Nostoc sp. PCC 7120	all2561	-44	4.4	AATGATATAGCTCACA
Synechococcus elongatus PCC 7942	Synpcc7942_2079	-63	4.2	TGTGATTAAGCACACA

Position: -94 Score: 3.9 Sequence: TGTTGTCAAAGTCACA Locus tag: CY0110_09550
	CY0110_09550	-94	3.9	TGTTGTCAAAGTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis regulator, DeoR family
Cyanothece sp. ATCC 51142	cce_0683	-95	3.9	TGTTGTCAAAGTCACA
Cyanothece sp. PCC 8801	PCC8801_0414	-41	3.8	GTTGATTTAAGTCCTA
Microcystis aeruginosa NIES-843	MAE_23100	-128	3.7	TGTTGTCAAAGTCACG
Nostoc sp. PCC 7120	all2491	-42	3.7	TGTTGTCAAAGTCAAA
Prochlorococcus marinus str. MIT 9313	PMT1607	-71	3.9	CCTGATCTAAGGCAAC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Crp regulog to Cyanothece sp. CCY 0110

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --