Propagation of SufR regulog to Cyanothece sp. CCY 0110
| Source regulog: | SufR - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | repressor |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Cyanothece sp. CCY 0110 |
| Orthologous TF(s) | CY0110_09550 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -134
Score: 5.6 Sequence: AAAAACAACTCTAATGTTGCCTTA
Locus tag: CY0110_04748
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| CY0110_04748 | -134 | 5.6 | AAAAACAACTCTAATGTTGCCTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifJ | ||||
| Ortholog function: Pyruvate oxidoreductase | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1443 | -152 | 5.1 | TTTAGCAAGCATTTTGTTGTTAAA |
| Synechocystis sp. PCC 6803 | sll0741 | -172 | 4.9 | AAAAACAATCTTGACGTTGTTTAA |
| Cyanothece sp. ATCC 51142 | cce_0953 | -133 | 5.6 | AAAAACAACCCTAATGTTGTGTTA |
| Cyanothece sp. PCC 8801 | PCC8801_3918 | -134 | 5.5 | AAAAACAACCATGAAGTTGTCTTA |
|
Position: -137
Score: 5.9 Sequence: TTTAACAACAAAAATGTTGCTAAA
Locus tag: CY0110_12152
|
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| CY0110_12152 | -137 | 5.9 | TTTAACAACAAAAATGTTGCTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufD | ||||
| Ortholog function: Iron-sulfur assembly protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1812 | -145 | 5.2 | TTTGACAACTTTTTTGTTGTTAAA |
| -104 | 5.6 | TAAAACAACCAAACAGTTGTTAAA | ||
| Synechocystis sp. PCC 6803 | slr0076 | -116 | 5.3 | TAAAACAACTTACCTGTTGTTTTA |
| Cyanothece sp. ATCC 51142 | cce_1005 | -137 | 5.8 | TTTAACAACATTTTTGTTGCTAAA |
| Cyanothece sp. PCC 8801 | PCC8801_0417 | -188 | 4.8 | TTTGACAACAATGGGGTTGTTATT |
| -148 | 5.9 | TTGAGCAACAAAAATGTTGTTTAA | ||
| Cyanothece sp. PCC 7425 | Cyan7425_3443 | -106 | 5 | TTAGACAACTGATGTGTTGCTAAA |
| -67 | 5.3 | TTAAGCAACGCCTGAGTTGTTTAA | ||
| Microcystis aeruginosa NIES-843 | MAE_23070 | -105 | 5.1 | TTTGACAACAGCTTTGTTGTTAAT |
| -65 | 5.9 | TTAAACAACTTTATTGTTGTTTAA | ||
| Nostoc sp. PCC 7120 | alr2494 | -193 | 5.2 | TTTGACAACATTGTTGTTGTTAAT |
| -148 | 6 | TTAAACAACATCGATGTTGTTTTA | ||
| Trichodesmium erythraeum IMS101 | Tery_4357 | -62 | 6 | TTAAACAACAAATAAGTTGTTTAA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1737 | -101 | 5.1 | TTTGACAACATTGATGTTGTTCAA |
| -63 | 5.1 | TTAAGCAACGTCTGTGTTGTTCAA | ||
| Prochlorococcus marinus str. MIT 9313 | PMT1604 | -194 | 5 | AAACGAAACCAATAGGTTTCGTTT |
| Synechococcus sp. WH 8102 | SYNW0321 | -39 | 4.9 | TAAGGAAACCAGGTCGTTTCGTAA |
|
Position: -197
Score: 4.8 Sequence: TTTGACAACAATTGAGTTGTTAAT
Position: -157
Score: 5.8 Sequence: TAAAGAAACATAAATGTTGTTTTA
Locus tag: CY0110_09545
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| CY0110_09545 | -197 | 4.8 | TTTGACAACAATTGAGTTGTTAAT | |
| -157 | 5.8 | TAAAGAAACATAAATGTTGTTTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufB | ||||
| Ortholog function: Iron-sulfur assembly protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1814 | -145 | 5.2 | TTTGACAACTTTTTTGTTGTTAAA |
| -104 | 5.6 | TAAAACAACCAAACAGTTGTTAAA | ||
| Synechocystis sp. PCC 6803 | slr0074 | -116 | 5.3 | TAAAACAACTTACCTGTTGTTTTA |
| Cyanothece sp. ATCC 51142 | cce_0685 | -155 | 4.8 | TTTGACAACAATTGAGTTGTTAAT |
| -115 | 5.8 | TAAAGAAACATAAATGTTGTTTTA | ||
| Cyanothece sp. PCC 8801 | PCC8801_0415 | -188 | 4.8 | TTTGACAACAATGGGGTTGTTATT |
| -148 | 5.9 | TTGAGCAACAAAAATGTTGTTTAA | ||
| Cyanothece sp. PCC 7425 | Cyan7425_3450 | -106 | 5 | TTAGACAACTGATGTGTTGCTAAA |
| -67 | 5.3 | TTAAGCAACGCCTGAGTTGTTTAA | ||
| Microcystis aeruginosa NIES-843 | MAE_23090 | -105 | 5.1 | TTTGACAACAGCTTTGTTGTTAAT |
| -65 | 5.9 | TTAAACAACTTTATTGTTGTTTAA | ||
| Nostoc sp. PCC 7120 | alr2492 | -193 | 5.2 | TTTGACAACATTGTTGTTGTTAAT |
| -148 | 6 | TTAAACAACATCGATGTTGTTTTA | ||
| Trichodesmium erythraeum IMS101 | Tery_4355 | -62 | 6 | TTAAACAACAAATAAGTTGTTTAA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1735 | -101 | 5.1 | TTTGACAACATTGATGTTGTTCAA |
| -63 | 5.1 | TTAAGCAACGTCTGTGTTGTTCAA | ||
| Prochlorococcus marinus str. MIT 9313 | PMT1606 | -194 | 5 | AAACGAAACCAATAGGTTTCGTTT |
| Synechococcus sp. JA-3-3Ab | CYA_2190 | -67 | 5.3 | TTAAGCAACAACCGTGTTGTTTTA |
| Synechococcus sp. WH 8102 | SYNW0319 | -39 | 4.9 | TAAGGAAACCAGGTCGTTTCGTAA |
| Thermosynechococcus elongatus BP-1 | null | -116 | 5.5 | TAAAACAACCGTTTTGTTGCTAAA |
| -78 | 5.2 | TAAAGCAACCATCTCGTTGCTTAA | ||
|
Position: -148
Score: 5.7 Sequence: TAAAACAACATTTATGTTTCTTTA
Position: -108
Score: 5.7 Sequence: ATTAACAACTCAATTGTTGTCAAA
Locus tag: CY0110_09550
|
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| CY0110_09550 | -148 | 5.7 | TAAAACAACATTTATGTTTCTTTA | |
| -108 | 5.7 | ATTAACAACTCAATTGTTGTCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufR | ||||
| Ortholog function: Iron-sulfur cluster biogenesis regulator SufR in Cyanobacteria | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1815 | -80 | 5.5 | TTTAACAACTGTTTGGTTGTTTTA |
| -39 | 5.8 | TTTAACAACAAAAAAGTTGTCAAA | ||
| Synechocystis sp. PCC 6803 | sll0088 | -163 | 5.6 | TAAAACAACAGGTAAGTTGTTTTA |
| -123 | 5.6 | ATTAGCAACCCGATTGTTGTCAAA | ||
| Cyanothece sp. ATCC 51142 | cce_0683 | -149 | 5.7 | TAAAACAACATTTATGTTTCTTTA |
| -109 | 5.7 | ATTAACAACTCAATTGTTGTCAAA | ||
| Cyanothece sp. PCC 8801 | PCC8801_0414 | -200 | 5.7 | TTAAACAACATTTTTGTTGCTCAA |
| -160 | 5.6 | AATAACAACCCCATTGTTGTCAAA | ||
| Cyanothece sp. PCC 7425 | Cyan7425_3451 | -113 | 5.5 | TTAAACAACTCAGGCGTTGCTTAA |
| -74 | 5.8 | TTTAGCAACACATCAGTTGTCTAA | ||
| Microcystis aeruginosa NIES-843 | MAE_23100 | -182 | 5.9 | TTAAACAACAATAAAGTTGTTTAA |
| -142 | 5.7 | ATTAACAACAAAGCTGTTGTCAAA | ||
| Nostoc sp. PCC 7120 | all2491 | -101 | 5.9 | TAAAACAACATCGATGTTGTTTAA |
| -56 | 5.7 | ATTAACAACAACAATGTTGTCAAA | ||
| Trichodesmium erythraeum IMS101 | Tery_4354 | -212 | 6 | TTAAACAACTTATTTGTTGTTTAA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1733 | -136 | 5.7 | TTGAACAACACAGACGTTGCTTAA |
| -98 | 5.7 | TTGAACAACATCAATGTTGTCAAA | ||
| Prochlorococcus marinus str. MIT 9313 | PMT1607 | -204 | 5 | AAACGAAACCTATTGGTTTCGTTT |
| Synechococcus sp. JA-3-3Ab | CYA_2189 | -119 | 6 | TAAAACAACACGGTTGTTGCTTAA |
| Synechococcus sp. WH 8102 | SYNW0317 | -68 | 4.9 | TTACGAAACGACCTGGTTTCCTTA |
| Thermosynechococcus elongatus BP-1 | tlr0491 | -78 | 5.7 | TTAAGCAACGAGATGGTTGCTTTA |
| -40 | 5.9 | TTTAGCAACAAAACGGTTGTTTTA | ||