Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Crp regulog to Crocosphaera watsonii WH 8501

Reference regulog properties
Source regulog: Crp - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Phylum: Cyanobacteria
Propagated regulon:
Target genome Crocosphaera watsonii WH 8501
Orthologous TF(s) CwatDRAFT_3858
Regulated genes 20
Built upon 106 sites [see more]
Predicted regulatory interactions in Crocosphaera watsonii WH 8501
Locus tag Position Score Sequence
Position: 5
Score: 4.1
Sequence: AATGTTTAAAGTCACC
Position: 24
Score: 3.7
Sequence: TGTGTTCCCAGTCAAA
Locus tag: CwatDRAFT_4307
CwatDRAFT_4307 5 4.1 AATGTTTAAAGTCACC
24 3.7 TGTGTTCCCAGTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcC
Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated
Cyanothece sp. ATCC 51142 cce_2911 5 4.1 AATGTTTAAAGTCACC
Cyanothece sp. PCC 8801 PCC8801_2788 5 3.9 GATGTTTAAAGTCACC
Microcystis aeruginosa NIES-843 MAE_10240 5 4.1 GATGTTCAAAATCACC
Trichodesmium erythraeum IMS101 Tery_3647 5 4.2 AATGTTTAAGATCACA
Synechococcus sp. JA-3-3Ab CYA_2225 5 3.7 CATGTTTAAGATCACG
Synechococcus sp. WH 8102 SYNW0483 5 3.9 GTTGTTCAAAGTCACC
Thermosynechococcus elongatus BP-1 null -233 3.6 CATGAAAGAAGTCACC
Position: -83
Score: 5
Sequence: TGTGATCTTGATCACC
Locus tag: CwatDRAFT_4119
CwatDRAFT_4119 -83 5 TGTGATCTTGATCACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: murF
Ortholog function: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
Synechococcus sp. PCC 7002 SYNPCC7002_A2693 -92 4.1 GGTGACAAATATCACT
Synechocystis sp. PCC 6803 slr1351 -101 5 GGTGATCTAGATCACA
Cyanothece sp. ATCC 51142 cce_4424 -83 5.1 TGTGATCTTGATCACA
Cyanothece sp. PCC 8801 PCC8801_2372 -74 4.8 AGTGATCTGGGTCACA
Synechococcus sp. JA-3-3Ab CYA_0077 -32 3.8 ATTGACTAGAGTCATG
Thermosynechococcus elongatus BP-1 null 3 4.2 ATTGATCTAAAACAAC
Position: -78
Score: 4.4
Sequence: TGTGATAAAAAACCCA
Locus tag: CwatDRAFT_4107
CwatDRAFT_4107 -78 4.4 TGTGATAAAAAACCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
Cyanothece sp. ATCC 51142 cce_1977 -78 3.7 TGTGATAAAAAAGCCA
Position: -213
Score: 4
Sequence: GGTGGTATAAATGACA
Position: -47
Score: 3.6
Sequence: CTTGTTTTTAGTCAAA
Locus tag: CwatDRAFT_3815
CwatDRAFT_3815 -213 4 GGTGGTATAAATGACA
-47 3.6 CTTGTTTTTAGTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifB
Ortholog function: FeMo nitrogenase cofactor biosynthesis protein
Cyanothece sp. ATCC 51142 cce_0554 -123 4 GGTGGTATAAATGACA
Cyanothece sp. PCC 7425 Cyan7425_2361 -40 3.9 ACTGTTATAAAGCACC
Nostoc sp. PCC 7120 all1517 -299 3.1 ACTGCTATAAATCTTA
Trichodesmium erythraeum IMS101 Tery_4133 -356 3.7 TATGACTTATAGCATG
Position: -139
Score: 3.8
Sequence: TTTGACCTAAACCAAC
Locus tag: CwatDRAFT_2127
CwatDRAFT_2127 -139 3.8 TTTGACCTAAACCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0687
Ortholog function: Conserved hypothetical protein
Synechocystis sp. PCC 6803 slr0013 -56 4.1 TTTGATCAAAGTCCTA
Cyanothece sp. ATCC 51142 cce_3288 -137 3.8 TTTGACTTAAATAACC
Cyanothece sp. PCC 8801 PCC8801_0091 -153 3.8 TTTGATCTCGATCATT
Prochlorococcus marinus str. MIT 9313 PMT0719 17 3.7 TTTGAAACAATTCACC
Position: -94
Score: 3.9
Sequence: TGTTGTCAAAGTCACA
Locus tag: CwatDRAFT_1811
CwatDRAFT_1811 -94 3.9 TGTTGTCAAAGTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis regulator, DeoR family
Cyanothece sp. ATCC 51142 cce_0683 -95 3.9 TGTTGTCAAAGTCACA
Cyanothece sp. PCC 8801 PCC8801_0414 -41 3.8 GTTGATTTAAGTCCTA
Microcystis aeruginosa NIES-843 MAE_23100 -128 3.7 TGTTGTCAAAGTCACG
Nostoc sp. PCC 7120 all2491 -42 3.7 TGTTGTCAAAGTCAAA
Prochlorococcus marinus str. MIT 9313 PMT1607 -71 3.9 CCTGATCTAAGGCAAC
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