Propagation of Crp regulog to Crocosphaera watsonii WH 8501
| Source regulog: | Crp - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Crocosphaera watsonii WH 8501 |
| Orthologous TF(s) | CwatDRAFT_3858 |
| Regulated genes | 20 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: 5
Score: 4.1 Sequence: AATGTTTAAAGTCACC
Position: 24
Score: 3.7 Sequence: TGTGTTCCCAGTCAAA
Locus tag: CwatDRAFT_4307
|
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| CwatDRAFT_4307 | 5 | 4.1 | AATGTTTAAAGTCACC | |
| 24 | 3.7 | TGTGTTCCCAGTCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: apcC | ||||
| Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated | ||||
| Cyanothece sp. ATCC 51142 | cce_2911 | 5 | 4.1 | AATGTTTAAAGTCACC |
| Cyanothece sp. PCC 8801 | PCC8801_2788 | 5 | 3.9 | GATGTTTAAAGTCACC |
| Microcystis aeruginosa NIES-843 | MAE_10240 | 5 | 4.1 | GATGTTCAAAATCACC |
| Trichodesmium erythraeum IMS101 | Tery_3647 | 5 | 4.2 | AATGTTTAAGATCACA |
| Synechococcus sp. JA-3-3Ab | CYA_2225 | 5 | 3.7 | CATGTTTAAGATCACG |
| Synechococcus sp. WH 8102 | SYNW0483 | 5 | 3.9 | GTTGTTCAAAGTCACC |
| Thermosynechococcus elongatus BP-1 | null | -233 | 3.6 | CATGAAAGAAGTCACC |
|
Position: -83
Score: 5 Sequence: TGTGATCTTGATCACC
Locus tag: CwatDRAFT_4119
|
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| CwatDRAFT_4119 | -83 | 5 | TGTGATCTTGATCACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: murF | ||||
| Ortholog function: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2693 | -92 | 4.1 | GGTGACAAATATCACT |
| Synechocystis sp. PCC 6803 | slr1351 | -101 | 5 | GGTGATCTAGATCACA |
| Cyanothece sp. ATCC 51142 | cce_4424 | -83 | 5.1 | TGTGATCTTGATCACA |
| Cyanothece sp. PCC 8801 | PCC8801_2372 | -74 | 4.8 | AGTGATCTGGGTCACA |
| Synechococcus sp. JA-3-3Ab | CYA_0077 | -32 | 3.8 | ATTGACTAGAGTCATG |
| Thermosynechococcus elongatus BP-1 | null | 3 | 4.2 | ATTGATCTAAAACAAC |
|
Position: -78
Score: 4.4 Sequence: TGTGATAAAAAACCCA
Locus tag: CwatDRAFT_4107
|
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| CwatDRAFT_4107 | -78 | 4.4 | TGTGATAAAAAACCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxB | ||||
| Ortholog function: Cytochrome c oxidase subunit 2 (EC 1.9.3.1) | ||||
| Cyanothece sp. ATCC 51142 | cce_1977 | -78 | 3.7 | TGTGATAAAAAAGCCA |
|
Position: -213
Score: 4 Sequence: GGTGGTATAAATGACA
Position: -47
Score: 3.6 Sequence: CTTGTTTTTAGTCAAA
Locus tag: CwatDRAFT_3815
|
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| CwatDRAFT_3815 | -213 | 4 | GGTGGTATAAATGACA | |
| -47 | 3.6 | CTTGTTTTTAGTCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifB | ||||
| Ortholog function: FeMo nitrogenase cofactor biosynthesis protein | ||||
| Cyanothece sp. ATCC 51142 | cce_0554 | -123 | 4 | GGTGGTATAAATGACA |
| Cyanothece sp. PCC 7425 | Cyan7425_2361 | -40 | 3.9 | ACTGTTATAAAGCACC |
| Nostoc sp. PCC 7120 | all1517 | -299 | 3.1 | ACTGCTATAAATCTTA |
| Trichodesmium erythraeum IMS101 | Tery_4133 | -356 | 3.7 | TATGACTTATAGCATG |
|
Position: -139
Score: 3.8 Sequence: TTTGACCTAAACCAAC
Locus tag: CwatDRAFT_2127
|
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| CwatDRAFT_2127 | -139 | 3.8 | TTTGACCTAAACCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0687 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechocystis sp. PCC 6803 | slr0013 | -56 | 4.1 | TTTGATCAAAGTCCTA |
| Cyanothece sp. ATCC 51142 | cce_3288 | -137 | 3.8 | TTTGACTTAAATAACC |
| Cyanothece sp. PCC 8801 | PCC8801_0091 | -153 | 3.8 | TTTGATCTCGATCATT |
| Prochlorococcus marinus str. MIT 9313 | PMT0719 | 17 | 3.7 | TTTGAAACAATTCACC |
|
Position: -94
Score: 3.9 Sequence: TGTTGTCAAAGTCACA
Locus tag: CwatDRAFT_1811
|
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| CwatDRAFT_1811 | -94 | 3.9 | TGTTGTCAAAGTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufR | ||||
| Ortholog function: Iron-sulfur cluster biogenesis regulator, DeoR family | ||||
| Cyanothece sp. ATCC 51142 | cce_0683 | -95 | 3.9 | TGTTGTCAAAGTCACA |
| Cyanothece sp. PCC 8801 | PCC8801_0414 | -41 | 3.8 | GTTGATTTAAGTCCTA |
| Microcystis aeruginosa NIES-843 | MAE_23100 | -128 | 3.7 | TGTTGTCAAAGTCACG |
| Nostoc sp. PCC 7120 | all2491 | -42 | 3.7 | TGTTGTCAAAGTCAAA |
| Prochlorococcus marinus str. MIT 9313 | PMT1607 | -71 | 3.9 | CCTGATCTAAGGCAAC |