Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Prochlorococcus marinus str. SS120

Reference regulog properties
Source regulog: Crp - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. SS120
Orthologous TF(s) No orthologous TFs found
Regulated genes 4
Built upon 106 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. SS120
Locus tag Position Score Sequence
Position: -85
Score: 4
Sequence: CATGAATAAAATCAAA
Locus tag: Pro0023
Pro0023 -85 4 CATGAATAAAATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gap2
Ortholog function: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
Synechococcus sp. PCC 7002 SYNPCC7002_A0106 -65 3.7 TATGATTGGGGTCATC
Cyanothece sp. PCC 8801 PCC8801_2557 -31 4 ATTGAGCTAAAGCATA
Nostoc sp. PCC 7120 all5062 -56 3.8 TATGATTGGGGTCAAA
-1 4.1 TGTGATTAGAGTCGCA
Trichodesmium erythraeum IMS101 Tery_4030 -410 3.6 TATGATAATTCTCAAG
Position: -276
Score: 3.8
Sequence: AGTAATAATAATCCTA
Locus tag: Pro0510
Pro0510 -276 3.8 AGTAATAATAATCCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppa
Ortholog function: inorganic pyrophosphatase
Cyanothece sp. ATCC 51142 cce_4329 -265 4.5 TGTGATTATTATCAAA
-104 4.4 TGTGATTATTATCAAC
Cyanothece sp. PCC 8801 PCC8801_2042 -177 4 TGTGATACTCATCATA
Cyanothece sp. PCC 7425 Cyan7425_1645 -273 3.7 ACTGATTAAGGGCACT
Nostoc sp. PCC 7120 all3570 -160 3.7 TGTGATATTTTTCCAC
Trichodesmium erythraeum IMS101 Tery_1519 -237 3.9 AATGATAGAGTTCACG