Propagation of NtcB regulog to Synechococcus sp. JA-2-3B'a(2-13)
| Source regulog: | NtcB - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Nitrite |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Synechococcus sp. JA-2-3B'a(2-13) |
| Orthologous TF(s) | CYB_0332 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -101
Score: 4.4 Sequence: ATGACAAAACTGCAT
Locus tag: CYB_0034
|
||||
| CYB_0034 | -101 | 4.4 | ATGACAAAACTGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nirA | ||||
| Ortholog function: ferredoxin--nitrite reductase | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1827 | -162 | 4 | ATGCGGCGATCGCAT |
| Synechocystis sp. PCC 6803 | slr0898 | -103 | 4.8 | ATGCGTAAACTGCAT |
| Cyanothece sp. ATCC 51142 | cce_1223 | -127 | 4.7 | ATGCAAAAAATCCAT |
| -105 | 4.1 | ATGCAAAAAACGGAT | ||
| Cyanothece sp. PCC 8801 | PCC8801_2468 | -126 | 3.9 | ATGCAAAATAATCAT |
| Cyanothece sp. PCC 7425 | Cyan7425_4573 | -174 | 4.5 | ATGCAGGTTTGGCAT |
| Microcystis aeruginosa NIES-843 | MAE_18410 | -241 | 4.6 | ATGCACTTACTGCAT |
| Nostoc sp. PCC 7120 | alr0607 | -562 | 4.8 | ATGCAGAAAACGCAT |
| Trichodesmium erythraeum IMS101 | Tery_1068 | -250 | 4.7 | ATGTAATAAATGCAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1240 | -109 | 4.3 | TTGCAGAACATGCAT |
| Synechococcus sp. JA-3-3Ab | CYA_0612 | -101 | 4.4 | ATGACAAAACTGCAT |
| Thermosynechococcus elongatus BP-1 | tlr1349 | -111 | 4.4 | ATACAAAAACTGTAT |