Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NtcB regulog to Nostoc sp. PCC 7120

Reference regulog properties
Source regulog: NtcB - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Nitrite
Phylum: Cyanobacteria
Propagated regulon:
Target genome Nostoc sp. PCC 7120
Orthologous TF(s) all0602
Regulated genes 3
Built upon 44 sites [see more]
Predicted regulatory interactions in Nostoc sp. PCC 7120
Locus tag Position Score Sequence
Position: -31
Score: 3.9
Sequence: ATGCCGTAAATGTAA
Locus tag: all0602
all0602 -31 3.9 ATGCCGTAAATGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ntcB
Ortholog function: nitrogen assimilation transcriptional activator NtcB
Synechococcus sp. PCC 7002 SYNPCC7002_A1632 -56 4.4 ATGCAGTAAACTCAT
Synechocystis sp. PCC 6803 slr0395 -187 4 ATGGATTCTTTTCAT
Cyanothece sp. ATCC 51142 cce_0198 -125 3.6 AGACAAAAACTCCAT
Nostoc sp. PCC 7120 all0602 -31 3.9 ATGCCGTAAATGTAA
Trichodesmium erythraeum IMS101 Tery_4333 -87 4.1 ATGAAATATTTATAT
Synechococcus elongatus PCC 7942 Synpcc7942_1242 -192 4.3 ATGCATGTTCTGCAA
Thermosynechococcus elongatus BP-1 null -99 4.2 ATGGGAAAGTTGCAT
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