Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Cyanothece sp. PCC 8802

Reference regulog properties
Source regulog: LexA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. PCC 8802
Orthologous TF(s) Cyan8802_2248
Regulated genes 3
Built upon 26 sites [see more]
Predicted regulatory interactions in Cyanothece sp. PCC 8802
Locus tag Position Score Sequence
Position: -47
Score: 4.4
Sequence: ACTACACTTGTATT
Locus tag: Cyan8802_1290
Cyan8802_1290 -47 4.4 ACTACACTTGTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0856
Ortholog function: Conserved hypothetical protein, no COGs
Cyanothece sp. ATCC 51142 cce_3128 -34 3.8 ACTACACTTATATT
Cyanothece sp. PCC 8801 PCC8801_1259 -47 4.4 ACTACACTTGTATT
Cyanothece sp. PCC 7425 Cyan7425_4886 -52 4.4 ACTACACTTGTATT
Nostoc sp. PCC 7120 all0854 -46 4.4 ACTACACTTGTATT
Synechococcus sp. JA-3-3Ab CYA_0805 -39 3.7 GCTACAGGAGTAGT
Gloeobacter violaceus PCC 7421 gll1134 -45 4.2 ACTACGGCTATACT
Position: -75
Score: 4.3
Sequence: AGTACTTATGTTCG
Locus tag: Cyan8802_2248
Cyan8802_2248 -75 4.3 AGTACTTATGTTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88)
Cyanothece sp. ATCC 51142 cce_1899 -32 4.7 AGTACCCATGTTCT
Cyanothece sp. PCC 8801 PCC8801_2186 -75 4.3 AGTACTTATGTTCG
Cyanothece sp. PCC 7425 Cyan7425_1233 -131 4.5 GATACAAGTGTTCT
Nostoc sp. PCC 7120 alr4908 -47 4.8 AGTACTAATGTTCT
Prochlorococcus marinus str. MIT 9313 PMT0380 -28 4.6 GGTACACATGTATT
© 2009-2020 RegPrecise